Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K12
(547 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 117 2e-26
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 117 3e-26
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 117 3e-26
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 117 3e-26
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 117 3e-26
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 117 3e-26
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 117 3e-26
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 117 3e-26
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 117 3e-26
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 117 3e-26
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 107 3e-23
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 95 1e-19
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 87 4e-17
AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein. 31 2.0
U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein L... 30 6.1
BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcript... 30 6.1
BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcript... 30 6.1
BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcript... 30 6.1
BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein. 30 6.1
AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcript... 30 6.1
AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcript... 30 6.1
AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcript... 30 6.1
AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcript... 30 6.1
AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein... 30 6.1
AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein... 30 6.1
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 117 bits (282), Expect = 2e-26
Identities = 66/153 (43%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L GV R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 446
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 447 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 198
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 117 bits (281), Expect = 3e-26
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 446
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 447 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 198
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 117 bits (281), Expect = 3e-26
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 446
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 447 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 198
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 117 bits (281), Expect = 3e-26
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 446
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 447 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 198
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 117 bits (281), Expect = 3e-26
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 446
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 447 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 198
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 117 bits (281), Expect = 3e-26
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 446
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 447 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 198
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 117 bits (281), Expect = 3e-26
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 446
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 447 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 198
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 117 bits (281), Expect = 3e-26
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 446
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 447 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 198
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 117 bits (281), Expect = 3e-26
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 446
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 447 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 198
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 117 bits (281), Expect = 3e-26
Identities = 65/153 (42%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXX 446
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 447 XXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 KQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 198
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 107 bits (257), Expect = 3e-23
Identities = 63/154 (40%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Frame = +3
Query: 105 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 272
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 273 TVLLKSRKSFYPTQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKR-XXX 443
V L+ +YPT+D R SHGK FS+HVR+ R ++TPGT+ I+L GR GK
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGKNWVVF 165
Query: 444 XXXXXXXXXXFTGPFAFNACPLRRIPQRYVIGTS 545
TGP N PLRR Q++VI TS
Sbjct: 166 LKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATS 199
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 95.5 bits (227), Expect = 1e-19
Identities = 54/141 (38%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Frame = +3
Query: 129 VLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSFYP 308
+ S+ MY +K Y V K +GG+KNGGTR V L+ +YP
Sbjct: 60 ICHVSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 309 TQDKIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTG 482
T+D R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR T
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTD 177
Query: 483 PFAFNACPLRRIPQRYVIGTS 545
++ PLRR Q++VI TS
Sbjct: 178 LWSSIEVPLRRTHQKFVIATS 198
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 87.0 bits (206), Expect = 4e-17
Identities = 47/118 (39%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Frame = +3
Query: 138 FSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSFYPTQD 317
+S+ MY +K Y V K +GG+KNGGTR V L+ +YPT+D
Sbjct: 2 YSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 318 KIRGR-SHGKS-FSKHVRRTRPNLTPGTVCILLAGRHAGKRXXXXXXXXXXXXXFTGP 485
R SHGK FS+HVR+ R ++TPGT+ I+L GRH GKR TGP
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGP 117
>AB051846-1|BAB61868.1| 758|Homo sapiens Raichu404X protein.
Length = 758
Score = 31.5 bits (68), Expect = 2.0
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 457 GNTPTSTTRLPACLPANRMHTVPGVRLGLVLRTCLLKLL 341
G TP+ T+ N+ TV VR G+ L CL+K L
Sbjct: 411 GGTPSKTSNTIRVFLPNKQRTVVNVRNGMSLHDCLMKAL 449
>U77457-1|AAC13544.1| 161|Homo sapiens LIM-homeodomain protein
LMX1B/LMX1.2 protein.
Length = 161
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 81 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 137
Query: 335 RT 330
T
Sbjct: 138 ET 139
>BC113491-1|AAI13492.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 335 RT 330
T
Sbjct: 232 ET 233
>BC112120-1|AAI12121.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 335 RT 330
T
Sbjct: 232 ET 233
>BC069601-1|AAH69601.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 335 RT 330
T
Sbjct: 232 ET 233
>BC069588-1|AAH69588.1| 377|Homo sapiens LMX1B protein protein.
Length = 377
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 173 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 229
Query: 335 RT 330
T
Sbjct: 230 ET 231
>AL161908-2|CAH70295.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 335 RT 330
T
Sbjct: 232 ET 233
>AL161908-1|CAH70294.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 198 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 254
Query: 335 RT 330
T
Sbjct: 255 ET 256
>AL161731-2|CAI40918.1| 372|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 335 RT 330
T
Sbjct: 232 ET 233
>AL161731-1|CAI40917.1| 402|Homo sapiens LIM homeobox transcription
factor 1, beta protein.
Length = 402
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 198 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 254
Query: 335 RT 330
T
Sbjct: 255 ET 256
>AF059575-1|AAC27294.1| 379|Homo sapiens LIM homeodomain protein
protein.
Length = 379
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 335 RT 330
T
Sbjct: 232 ET 233
>AF057135-1|AAC39738.1| 372|Homo sapiens LIM homeodomain protein
LMX1B protein.
Length = 372
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 515 PAQGTRVESKRSSEE*QTTRQHSNEHDTLASVSARQQNAHCAGSEVRSRPTHMFTETLAM 336
PA+G +SK S ++ + R+ L + +Q+ A A EV S+P ETLA
Sbjct: 175 PAKGQGSQSKGSGDDGKDPRRPKRPRTILTT---QQRRAFKASFEVSSKPCRKVRETLAA 231
Query: 335 RT 330
T
Sbjct: 232 ET 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,007,827
Number of Sequences: 237096
Number of extensions: 2010271
Number of successful extensions: 13388
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 12915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13356
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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