Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K10
(429 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203... 33 0.074
02_05_0583 + 30128795-30129158,30129342-30129505,30129602-301296... 30 0.69
12_02_0128 - 13969118-13969222,13969329-13969460,13969558-139696... 30 0.91
06_03_0497 + 21424732-21424899,21424992-21425057,21425176-214256... 30 0.91
02_04_0625 - 24547435-24547569,24547674-24547742,24547871-245479... 29 1.2
09_06_0199 + 21526872-21527250,21527431-21527594,21527673-215277... 29 1.6
05_02_0003 + 5520331-5520476,5520572-5520644,5520762-5520928,552... 29 1.6
12_01_0281 + 2059397-2059721,2059807-2060675,2086761-2086910 29 2.1
03_02_0277 + 7056341-7056391,7056681-7056764,7057107-7057223,705... 29 2.1
01_06_1449 - 37444769-37446190 29 2.1
07_01_0597 + 4438858-4439847,4439936-4440067,4440397-4441176,444... 28 2.8
03_03_0248 + 15819264-15819460,15820691-15820729,15820797-158209... 28 2.8
09_04_0163 - 15249816-15249920,15250032-15250163,15250463-152506... 28 3.7
08_01_0727 + 6567935-6568112,6568197-6568912,6569061-6569162,656... 27 4.9
01_07_0295 - 42577779-42578330 27 4.9
12_02_0078 + 13290432-13290924,13290998-13291201,13291290-132920... 27 6.4
10_01_0226 - 2401252-2401277,2403491-2403537,2404381-2405504 27 8.5
10_01_0195 + 2137098-2137498,2137687-2137987 27 8.5
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 27 8.5
07_03_0073 - 13063209-13063403,13063489-13063579,13063707-130637... 27 8.5
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 27 8.5
01_06_1365 - 36690267-36692222 27 8.5
>07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,
2031334-2031415,2031544-2031609,2032606-2033304,
2033422-2035424,2035599-2036173,2037060-2037223,
2037306-2037365,2037475-2037839
Length = 1699
Score = 33.5 bits (73), Expect = 0.074
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 4/139 (2%)
Frame = +3
Query: 21 ASTISEKAQTSTSKMVL--IDRKKFISSAERKSPRFRRTPGKKTPTRLTSGKRTPMKSPK 194
AS + A +S S V + + ER+S ++ P TP +++ +R P
Sbjct: 1398 ASAVPAPAWSSESAKVQRPLSLRDIQREQERRSAVAQQQPPSPTPAKVSINQRNHANVPS 1457
Query: 195 TRSGGSSKKKAMMRLLLDSENITRTQPSRETLKRALFVSPENRNGSQTLSSSVP--SNVM 368
++ GSS KA+ + + S +R++ + E LF P S P S+
Sbjct: 1458 WQASGSSPSKAVAPVQMSSNASSRSKSNAED---DLFWGPSEHAKQDKKQSEFPTLSSQT 1514
Query: 369 KSMQRIFGSPIRQAETKSS 425
+S SP+ + ++++S
Sbjct: 1515 RSSSIKDQSPMNRQKSQAS 1533
>02_05_0583 +
30128795-30129158,30129342-30129505,30129602-30129665,
30130082-30130215,30130369-30130452,30130580-30130654,
30130734-30130805,30130892-30130965,30131217-30131269,
30131388-30131497,30131824-30131892,30131975-30132049,
30132449-30132508,30132555-30132647,30132718-30132797,
30132877-30132976,30133153-30133590
Length = 702
Score = 30.3 bits (65), Expect = 0.69
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +3
Query: 123 RRTPGKKTPTRLTSGKRTPMKSPKTRSGGSSKKKAMMRLLLDSENITRTQPSRETLKRAL 302
RR P P +L +GK+ SPK + KK+ ++ D + + Q + ++
Sbjct: 8 RRQPPPPPPRQLAAGKK-GKASPKAAKRAAPKKQRLLESSSDDSELEQQQGQLQEVESGS 66
Query: 303 FVSPENRNGSQTLSSS 350
+ + +G++ LS S
Sbjct: 67 DLDVPSDSGAEELSDS 82
>12_02_0128 -
13969118-13969222,13969329-13969460,13969558-13969671,
13971843-13971941,13972035-13972171,13972505-13972598,
13973248-13973355,13973442-13973537,13973673-13973845,
13974818-13975172,13975308-13975442,13975524-13975667,
13975762-13976436,13976552-13976617,13976710-13976877
Length = 866
Score = 29.9 bits (64), Expect = 0.91
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 21 ASTISEKAQTSTSKMVLIDRKKFISSAERKSPRFRRTPGKKT-PTRLTSGKRTPMKSPKT 197
A++ISE+ +TS S + + + + S +R G+ P R KRT ++ +
Sbjct: 28 ANSISEEEETSDSDKYITKKDLVSTLKDLFSGSIKRKRGRTDKPVRRQKQKRTKLEYDQD 87
Query: 198 RSGGSSKKKAMMRL 239
+SG + K RL
Sbjct: 88 QSGSAESPKPRSRL 101
>06_03_0497 +
21424732-21424899,21424992-21425057,21425176-21425634,
21425945-21426088,21426172-21426306,21426418-21426808,
21427256-21427428,21427508-21427615,21427715-21427810,
21427896-21428003,21428644-21428792,21428924-21428925,
21429071-21429207,21429538-21429842,21430922-21431099,
21431192-21431305,21431373-21431504,21431610-21431843
Length = 1032
Score = 29.9 bits (64), Expect = 0.91
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 21 ASTISEKAQTSTSKMVLIDRKKFISSAERKSPRFRRTPGKKT-PTRLTSGKRTPMKSPKT 197
A++ISE+ +TS S + + + + S +R G+ P R KRT ++ +
Sbjct: 28 ANSISEEEETSDSDKYITKKDLVSTLKDLFSGSIKRKRGRTDKPVRRQKQKRTKLEYDQD 87
Query: 198 RSGGSSKKKAMMRL 239
+SG + K RL
Sbjct: 88 QSGSAESPKPRSRL 101
>02_04_0625 - 24547435-24547569,24547674-24547742,24547871-24547997,
24548086-24548209,24548714-24548832,24548953-24549044,
24549124-24549329,24549429-24549534,24549636-24549740,
24549836-24549942,24550030-24550253,24550341-24550468,
24550945-24551022,24551338-24552012,24552655-24552798,
24552985-24553064,24553958-24554029,24554124-24554343,
24554460-24554590,24555118-24555243,24555567-24555695,
24556156-24556318,24556408-24556545,24557198-24557317,
24557521-24557682,24557751-24557876,24558172-24558342,
24558435-24558590,24559061-24559408
Length = 1526
Score = 29.5 bits (63), Expect = 1.2
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 15 CSA-STISEKAQTSTSKMVLIDRKKFISSAERKSPRFRRTPGKKTPTRLTSGKRTPMKSP 191
CS + I A ++ V D KK + SP+ + ++ + TS K+T
Sbjct: 853 CSTPAVIIRSAAECDAQDVTNDPKKKRPKVAKSSPKLSKPASERQEVKRTSAKKT----- 907
Query: 192 KTRSGGSSKKKAMMRLLLDSEN-ITRTQPSRETLKRALFVSPEN-RNGSQTLSSSVPSNV 365
SG S+ K + DS N + P + + SP N R+GS L V + V
Sbjct: 908 ---SGASTTAKKNKKEKADSSNDVLDAIPEQNKSNIMNYSSPSNFRSGSMKLGDVVTAKV 964
>09_06_0199 +
21526872-21527250,21527431-21527594,21527673-21527736,
21528001-21528134,21528302-21528385,21528526-21528600,
21528683-21528754,21528852-21528925,21529185-21529282,
21529355-21529464,21529794-21529862,21529944-21530018,
21530519-21530611,21530690-21530769,21530877-21530976,
21531150-21531586,21531676-21531706,21532873-21533822,
21533982-21534201
Length = 1102
Score = 29.1 bits (62), Expect = 1.6
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +3
Query: 96 SAERKSPRFRRTPGKKTPTRLTSGKRTPMKSPKTRSGGSSKKKAMMRLLLDSENITRTQP 275
++E+K P + KKT + TSG T K P T GG K+ M+R ++ +R++
Sbjct: 658 TSEKKQPVSAKI--KKTVPKRTSG--TKEKKPDTDQGGKRKRNWMVRREWEAYKKSRSKK 713
Query: 276 SRETLKRALFVSPENRNGSQT 338
K E R QT
Sbjct: 714 KWAAAKAQALQDLETRFIQQT 734
>05_02_0003 +
5520331-5520476,5520572-5520644,5520762-5520928,
5520929-5521223,5521531-5521674,5521756-5521890,
5522004-5522093,5523702-5523809,5523905-5523986,
5525362-5525417,5525888-5525986,5526090-5526394,
5526898-5527075,5527167-5527280,5527376-5527507,
5527614-5527718
Length = 742
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 21 ASTISEKAQTSTSKMVLIDRKKFISSAERKSPRFRRTPGKKTPTRLTSGKRTPMKSPKTR 200
A++ISE+ +TS S+ + KK K +T K P R KRT ++ + +
Sbjct: 28 ANSISEEEETSDSEKYIT--KKISFQDRSKGKEVGQTNQK--PVRRQKQKRTKLQYDQDK 83
Query: 201 SGGSSKKKAMMRL 239
SG + K RL
Sbjct: 84 SGSAESPKPRSRL 96
>12_01_0281 + 2059397-2059721,2059807-2060675,2086761-2086910
Length = 447
Score = 28.7 bits (61), Expect = 2.1
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 12/84 (14%)
Frame = +3
Query: 192 KTRSGGSSKKKAMMRLL------LDSENITRTQPSRETLKRALFVSPENR------NGSQ 335
K GGS KK + RL+ D E+ T S L +P + GS
Sbjct: 268 KVAKGGSIKKTSGKRLVDVGRVFSDDESSDETPTSPACRSLGLSTAPGVKVDAGRVGGSV 327
Query: 336 TLSSSVPSNVMKSMQRIFGSPIRQ 407
+S+ V K+ R+FGSP+RQ
Sbjct: 328 AGASASIDQVAKTAARVFGSPVRQ 351
>03_02_0277 +
7056341-7056391,7056681-7056764,7057107-7057223,
7057335-7057772,7057889-7058295,7058371-7058470,
7058707-7058793,7059056-7059544
Length = 590
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/55 (41%), Positives = 24/55 (43%)
Frame = +3
Query: 138 KKTPTRLTSGKRTPMKSPKTRSGGSSKKKAMMRLLLDSENITRTQPSRETLKRAL 302
K TPT LTS RT + KT G S LL S R PS L RAL
Sbjct: 169 KSTPTTLTSETRTSHYNDKTGIGRSHSS-----LLQRSICSARVSPSANNLARAL 218
>01_06_1449 - 37444769-37446190
Length = 473
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = -3
Query: 367 ITFDGTEELRVWEPFLF---SGLTKRARFNVSLDGCVLV 260
+ F G E +++P L SG+++ RF+ S++GC LV
Sbjct: 189 VAFRGNEARELFKPSLIPDESGVSESYRFSQSIEGCQLV 227
>07_01_0597 +
4438858-4439847,4439936-4440067,4440397-4441176,
4441359-4441646,4441710-4441808
Length = 762
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 281 RNVKASSLCESRKQKRFPNSEFFCTIECYEVDAT 382
+ +K+S C SR + P F C + +DAT
Sbjct: 368 KRLKSSEQCPSRPPEPLPGRVFLCKVTAVRLDAT 401
>03_03_0248 +
15819264-15819460,15820691-15820729,15820797-15820936,
15821150-15821225,15822866-15823160,15823236-15823342,
15823442-15823489,15823568-15823853,15823954-15823961,
15824083-15824184,15824426-15824553,15824664-15824741,
15825047-15825145,15825247-15825302
Length = 552
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 125 AYAGEENAYSTDLR--QENTNEVTENTQRWFQQEESNDEAAAGL*KYY 262
+Y G+ N S DL+ +E+ E E ++ F ++S+DE + K +
Sbjct: 170 SYKGDGNEESEDLKSDEEDEEEEDEEDEKGFSSDDSSDERMESIAKEF 217
>09_04_0163 -
15249816-15249920,15250032-15250163,15250463-15250629,
15251259-15251448,15252530-15252661,15253275-15253382,
15253513-15253608,15253702-15253809,15253917-15254089,
15255026-15255401,15255887-15256030,15256125-15256799,
15256917-15256982,15257082-15257249
Length = 879
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 21 ASTISEKAQTSTSKMVLIDRKKFISSAERKSPRFRRTPGKKT-PTRLTSGKRTPMKSPKT 197
A++ISE+ +TS S + + + + S +R + P R KRT ++ +
Sbjct: 28 ANSISEEEETSDSDKYITKKDLVSTLKDLFSGSIKRKRARTDKPVRRQKQKRTKLEYDQD 87
Query: 198 RSGGSSKKKAMMRL 239
+SG + K RL
Sbjct: 88 KSGSAESPKPRSRL 101
>08_01_0727 +
6567935-6568112,6568197-6568912,6569061-6569162,
6569236-6569547,6569862-6570299
Length = 581
Score = 27.5 bits (58), Expect = 4.9
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Frame = +3
Query: 192 KTRSGGSSKKKAMMRLLL--------DSENITRTQPSRETLKRA----LFVSPENRNGSQ 335
K GGS KK + RL+ S N T T P+ +L + + V GS
Sbjct: 218 KVAKGGSIKKTSRKRLVDVGRVFSDDKSSNETPTSPAGRSLGLSTAPGVKVDTGRAGGSA 277
Query: 336 TLSSSVPSNVMKSMQRIFGSP 398
+S+ V+K+ R+FGSP
Sbjct: 278 AGASASTDQVVKTAARVFGSP 298
>01_07_0295 - 42577779-42578330
Length = 183
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +3
Query: 192 KTRSGGSSKKKAMMRLLLDS-ENITRTQPS 278
+ R GGS+ ++A++RLL S +TR +P+
Sbjct: 68 RRRGGGSALRRALLRLLFCSRRRLTRVEPA 97
>12_02_0078 +
13290432-13290924,13290998-13291201,13291290-13292024,
13292108-13292499
Length = 607
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 165 GKRTPMKSPKTRSGGSSKKKAMMRLLLDSENITRTQP 275
GKR K PK R +K K + +DS+ T+ P
Sbjct: 393 GKRKTRKPPKARPSKKTKGKGLRSTNVDSDEETQGSP 429
>10_01_0226 - 2401252-2401277,2403491-2403537,2404381-2405504
Length = 398
Score = 26.6 bits (56), Expect = 8.5
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 97 PRKGRALDLGVRRGRKRLLD*PPAREHQ*SHRKHAAVVPA 216
P + R L L GR++ + PPA E++ ++ +AAVV A
Sbjct: 151 PTRLRLLVLEPMLGRRQYIPAPPAPEYRPAYFSNAAVVSA 190
>10_01_0195 + 2137098-2137498,2137687-2137987
Length = 233
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 260 YQDATIKRNVKASSLCESRKQKRFPNSEFFCTIECY 367
YQ I +K +LC SR ++ NS T CY
Sbjct: 40 YQGYHILDIIKHRTLCSSRPEEEVSNSNTLSTRTCY 75
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 324 NGSQTLSSSVPSNVMKSMQRIFGSPIRQAETKSS 425
N S + SSS P +V+++ + G I +A KSS
Sbjct: 105 NASASSSSSSPKDVVRASVAVIGDAIEKAFDKSS 138
>07_03_0073 -
13063209-13063403,13063489-13063579,13063707-13063736,
13063827-13063937,13064023-13064260,13064366-13064837,
13065054-13065563,13065993-13066481
Length = 711
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 137 EENAYSTDLRQENTNEVTEN-TQRWFQQEESNDEA 238
+ +AY +RQE TN+VT+ TQ+++ + +A
Sbjct: 170 KRDAYKAKMRQEITNQVTQQVTQQFYSLAAQHPQA 204
>04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 26.6 bits (56), Expect = 8.5
Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +3
Query: 15 CSASTISEKAQTSTSKMVLIDRKKFISSAERKSPRFRRTPGKKTPTRLTSG---KRTPMK 185
CS + ++ +T ++V D+ + +SSA+ ++ +++ + TR + K
Sbjct: 782 CSLLSTEPSSEETTVRLVKKDQTRLVSSADSENDFAKKSESSQDRTRSSDKVQLKGFVPS 841
Query: 186 SPKTRSGGSS-KKKAMMRLLLDSENITRT 269
+PK+ G + A R ++ E + +T
Sbjct: 842 APKSSQGSRTYVSSAKNRFIVPKEQLQKT 870
>01_06_1365 - 36690267-36692222
Length = 651
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 78 RKKFISSAERKSPRFRRTPGKKTPTRLTSGKRTPM 182
R+ S+ + P F T K PT + +GK +P+
Sbjct: 411 RRSLERSSSVRRPSFEVTEPKPAPTTIANGKESPL 445
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,649,810
Number of Sequences: 37544
Number of extensions: 234663
Number of successful extensions: 782
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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