Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_K07
         (541 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...   156   5e-40
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    27   0.53 
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      26   0.93 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   0.93 
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   6.5  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score =  156 bits (378), Expect = 5e-40
 Identities = 70/108 (64%), Positives = 91/108 (84%)
 Frame = +2

Query: 215 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAE 394
           RK RIIDVVYNASNNEL+RTKTLVKNAI+V+DA+PFRQWYESHYLLPLG+K+  +L   E
Sbjct: 3   RKARIIDVVYNASNNELIRTKTLVKNAIIVIDASPFRQWYESHYLLPLGKKR--ELKAGE 60

Query: 395 EAIINKKRSQKTAKKYLSRQRLSKVQGGLEEQFHTGRLLACVASRTGQ 538
           E +++KKR++   +KY+ RQ+ +K+   +EEQF+ GRLLAC++SR GQ
Sbjct: 61  EDVLSKKRTKSNLRKYVKRQKNAKIDPAVEEQFNAGRLLACISSRPGQ 108


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 26.6 bits (56), Expect = 0.53
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = -3

Query: 92  PGDLTHTSSSYEWAHVCR--P*PSSYA 18
           PG  T T   Y WA VC   P PS+ A
Sbjct: 325 PGPQTQTEGFYSWAEVCAMLPNPSNTA 351


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -1

Query: 469 YLGQALPAQVLLRCLLTAFFVYDGFLSLSELGTFLPSEWQQVVAFI 332
           + G ++P + LL C   A F+++ ++ L E  T L   +   V F+
Sbjct: 348 FCGDSIPQRALLSCAFGAVFIFN-YIPLQEGTTRLRYTFFYAVCFV 392


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 306 WMPHLSGSGMKATTCCHSEGRKVPS 380
           W+PH+    +KAT   H+  R +P+
Sbjct: 819 WVPHVKEITLKATRIVHAVNRLMPN 843


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 255 TMNWCVPKPW*RMLLSWWMPHLSGSG 332
           T N    K W R +LS W P+  G G
Sbjct: 379 TRNTVSKKHWMRKVLSDWEPYPMGYG 404


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,108
Number of Sequences: 2352
Number of extensions: 14981
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)