Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K07
(541 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 299 4e-81
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 299 4e-81
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 299 4e-81
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 299 4e-81
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 240 3e-63
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 69 8e-12
M59834-1|AAA63267.1| 61|Homo sapiens protein vav protein. 29 7.9
BC150281-1|AAI50282.1| 1132|Homo sapiens MYT1L protein protein. 29 7.9
AF030227-1|AAC25011.1| 845|Homo sapiens vav protein protein. 29 7.9
AB029029-1|BAA83058.2| 1154|Homo sapiens KIAA1106 protein protein. 29 7.9
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 299 bits (734), Expect = 4e-81
Identities = 136/177 (76%), Positives = 152/177 (85%)
Frame = +2
Query: 11 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 190
D+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 191 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 370
+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKK
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKK 125
Query: 371 GAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVQGGLEEQFHTGRLLACVASRTGQC 541
GAKLT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+ASR GQC
Sbjct: 126 GAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQC 182
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 299 bits (734), Expect = 4e-81
Identities = 136/177 (76%), Positives = 152/177 (85%)
Frame = +2
Query: 11 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 190
D+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 191 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 370
+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKK
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKK 125
Query: 371 GAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVQGGLEEQFHTGRLLACVASRTGQC 541
GAKLT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+ASR GQC
Sbjct: 126 GAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQC 182
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 299 bits (734), Expect = 4e-81
Identities = 136/177 (76%), Positives = 152/177 (85%)
Frame = +2
Query: 11 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 190
D+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 191 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 370
+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKK
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKK 125
Query: 371 GAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVQGGLEEQFHTGRLLACVASRTGQC 541
GAKLT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+ASR GQC
Sbjct: 126 GAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQC 182
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 299 bits (734), Expect = 4e-81
Identities = 136/177 (76%), Positives = 152/177 (85%)
Frame = +2
Query: 11 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 190
D+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD GNF
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNF 65
Query: 191 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 370
+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKK
Sbjct: 66 SWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKK 125
Query: 371 GAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVQGGLEEQFHTGRLLACVASRTGQC 541
GAKLT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+ASR GQC
Sbjct: 126 GAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQC 182
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 240 bits (587), Expect = 3e-63
Identities = 120/177 (67%), Positives = 135/177 (76%)
Frame = +2
Query: 11 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 190
D+WHKRR TGGKR P KKRKYELGRPAANTK+GP+RIH VR RGG
Sbjct: 6 DNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------------- 51
Query: 191 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 370
C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKK
Sbjct: 52 -----C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKK 105
Query: 371 GAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVQGGLEEQFHTGRLLACVASRTGQC 541
GAKLT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+ASR GQC
Sbjct: 106 GAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQC 162
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 69.3 bits (162), Expect = 8e-12
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +2
Query: 380 LTEAEEAIINKKRSQKTAKKYLSRQRLSKVQGGLEEQFHTGRLLACVASRTGQC 541
LT EE I+NKKRS+K KKY R++ +K+ LEEQF G+LLAC+ASR GQC
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQC 54
>M59834-1|AAA63267.1| 61|Homo sapiens protein vav protein.
Length = 61
Score = 29.5 bits (63), Expect = 7.9
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 503 VQCGIAPPDHPVPWTGA-ACSGTSSLSFDCVFC 408
+QC + PP H V W GA C +L + C
Sbjct: 12 IQCRVLPPSHRVTWDGAQVCELAQALRDGVLLC 44
>BC150281-1|AAI50282.1| 1132|Homo sapiens MYT1L protein protein.
Length = 1132
Score = 29.5 bits (63), Expect = 7.9
Identities = 21/87 (24%), Positives = 36/87 (41%)
Frame = +1
Query: 274 QNLGKECYCRGGCHTFQAVV*KPLPAATRKEERCQAH*G*GSHHKQKTQSKDSEEVPEQA 453
+ + E R +++ + LP RK + +H + +T+ K+S+ P
Sbjct: 398 EKMAMEAGRRDNMRSYEDQSPRQLPGEDRKPKSSDSHVKKPYYDPSRTEKKESK-CPTPG 456
Query: 454 APVQGTGWSGGAIPHWTAVSMCGESDR 534
GTG G PH ++S C DR
Sbjct: 457 C--DGTGHVTGLYPHHRSLSGCPHKDR 481
>AF030227-1|AAC25011.1| 845|Homo sapiens vav protein protein.
Length = 845
Score = 29.5 bits (63), Expect = 7.9
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -3
Query: 503 VQCGIAPPDHPVPWTGA-ACSGTSSLSFDCVFC 408
+QC + PP H V W GA C +L + C
Sbjct: 12 IQCRVLPPSHRVTWDGAQVCELAQALRDGVLLC 44
>AB029029-1|BAA83058.2| 1154|Homo sapiens KIAA1106 protein protein.
Length = 1154
Score = 29.5 bits (63), Expect = 7.9
Identities = 21/87 (24%), Positives = 36/87 (41%)
Frame = +1
Query: 274 QNLGKECYCRGGCHTFQAVV*KPLPAATRKEERCQAH*G*GSHHKQKTQSKDSEEVPEQA 453
+ + E R +++ + LP RK + +H + +T+ K+S+ P
Sbjct: 420 EKMAMEAGRRDNMRSYEDQSPRQLPGEDRKPKSSDSHVKKPYYDPSRTEKKESK-CPTPG 478
Query: 454 APVQGTGWSGGAIPHWTAVSMCGESDR 534
GTG G PH ++S C DR
Sbjct: 479 C--DGTGHVTGLYPHHRSLSGCPHKDR 503
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,095,439
Number of Sequences: 237096
Number of extensions: 2331806
Number of successful extensions: 4839
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4839
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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