Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K07
(541 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 324 4e-91
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 27 0.16
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 2.6
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 4.6
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 4.6
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 4.6
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 6.1
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 6.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.1
AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein. 21 8.1
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 324 bits (796), Expect = 4e-91
Identities = 146/177 (82%), Positives = 162/177 (91%)
Frame = +2
Query: 11 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 190
DHWHKRRATGGKR PIRKKRK+ELGRPAANTKLGPQRIH VR+RGGN KYRALRLDTGNF
Sbjct: 6 DHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGNF 65
Query: 191 AWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRKK 370
+WGSEC+TRKTRIIDVVYNASNNELVRTKTLVKNAIV +DATPFRQWYE HY+LPLGRK+
Sbjct: 66 SWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLPLGRKR 125
Query: 371 GAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVQGGLEEQFHTGRLLACVASRTGQC 541
GAKLTEAEE ++NKKRS+K KY +RQR +KV+ LEEQF TGR+LAC++SR GQC
Sbjct: 126 GAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATGRVLACISSRPGQC 182
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 26.6 bits (56), Expect = 0.16
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 518 HMLTAVQCGIAPPDHPVPWTGAACSGTS 435
H V + PP+ PVP +AC G++
Sbjct: 169 HQFQTVVASMDPPEPPVPTVTSACVGSA 196
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 534 PVRLATHANSRPVW 493
P++ A H N+R VW
Sbjct: 291 PIKYAKHKNNRRVW 304
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 247 IINNINNTSLAG 212
+INN NNTS+ G
Sbjct: 488 VINNRNNTSMKG 499
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 4.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 225 VLLMLFIMPLTMNWCVPKPW*RMLLSWWMPHL 320
VL + F P T N PW R + WMP L
Sbjct: 333 VLNVHFRSPSTHNM---SPWVRQVFLNWMPRL 361
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 227 YESCGLNIQIPMRSFQYQD 171
YE CGL + PM SFQ D
Sbjct: 653 YE-CGLRFEDPMISFQPGD 670
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.4 bits (43), Expect = 6.1
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +3
Query: 225 VLLMLFIMPLTMNWCVPKPW 284
+L+ +MPL + W + W
Sbjct: 85 LLVTFLMMPLEIGWAITVSW 104
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +2
Query: 365 KKGAKLTEAEEAIINKKRSQKTAKKY 442
KKG+ +T+ +I + ++K K+Y
Sbjct: 517 KKGSFVTQYVGEVITNEEAEKRGKEY 542
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 8.1
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +2
Query: 215 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 328
RK + +VVY N + + V + I ++ A+P ++
Sbjct: 358 RKRPMHNVVYRPGENPVTQRLPAVLSRIGIILASPLKR 395
>AF134816-1|AAD40232.1| 50|Apis mellifera unknown protein.
Length = 50
Score = 21.0 bits (42), Expect = 8.1
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 515 MLTAVQCGIAPPDH 474
M+ A+ C I P DH
Sbjct: 21 MIWALDCSIKPKDH 34
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,285
Number of Sequences: 438
Number of extensions: 3893
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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