Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_K06
         (402 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   5.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   9.2  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 295 PVNELIVKLHFPSCDCCIF 239
           P N + +++ F + DC +F
Sbjct: 82  PANRMYIEIKFTTRDCSLF 100


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 396 NVAHATAGPVVTYNAPRIQKAGMFSKSL 313
           NVA A+A P+V Y      + G    SL
Sbjct: 157 NVAPASADPMVNYTLGHHHQNGATPSSL 184


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 116 PFSVNYFRSLLNLVF 72
           PFS+  F   LNL+F
Sbjct: 475 PFSIYSFLERLNLIF 489


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 116 PFSVNYFRSLLNLVF 72
           PFS+  F   LNL+F
Sbjct: 513 PFSIYSFLERLNLIF 527


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 145 HRILGDTRCQAT 180
           HR+ G+TR  AT
Sbjct: 185 HRLTGETRLSAT 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,451
Number of Sequences: 438
Number of extensions: 1956
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)