Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K05
(432 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 204 4e-53
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 204 4e-53
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 204 4e-53
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 194 3e-50
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 133 8e-32
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 57 1e-08
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm... 28 6.2
BT016036-1|AAV36921.1| 1281|Drosophila melanogaster RE01954p pro... 28 6.2
AY051927-1|AAK93351.1| 587|Drosophila melanogaster LD41072p pro... 28 6.2
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P... 28 6.2
AE013599-2017|AAF58164.2| 1281|Drosophila melanogaster CG8092-PA... 28 6.2
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 204 bits (498), Expect = 4e-53
Identities = 95/119 (79%), Positives = 105/119 (88%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 255
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 256 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVQKWQTLIEANIDVKTTDGYVLR 432
ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MV+KWQTLIEA ++ KT DGY+LR
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLR 139
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 204 bits (498), Expect = 4e-53
Identities = 95/119 (79%), Positives = 105/119 (88%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 255
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 256 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVQKWQTLIEANIDVKTTDGYVLR 432
ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MV+KWQTLIEA ++ KT DGY+LR
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLR 139
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 204 bits (498), Expect = 4e-53
Identities = 95/119 (79%), Positives = 105/119 (88%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 255
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 256 ERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVQKWQTLIEANIDVKTTDGYVLR 432
ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MV+KWQTLIEA ++ KT DGY+LR
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLR 139
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 194 bits (474), Expect = 3e-50
Identities = 92/120 (76%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Frame = +1
Query: 76 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADSD 252
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80
Query: 253 AERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVQKWQTLIEANIDVKTTDGYVLR 432
E SFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MV+KWQTLIEA ++ KT DGY+LR
Sbjct: 81 PEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLR 140
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 133 bits (322), Expect = 8e-32
Identities = 63/76 (82%), Positives = 67/76 (88%)
Frame = +1
Query: 205 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVQKWQTL 384
GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MV+KWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 385 IEANIDVKTTDGYVLR 432
IEA ++ KT DGY+LR
Sbjct: 74 IEAIVEAKTVDGYLLR 89
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +1
Query: 331 MDLTTDKLRWMVQKWQTLIEANIDVKTTDGYVLR 432
MDLTTDK R MV+KWQTLIEA ++ KT DGY+LR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLR 34
>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
transmembrane protein protein.
Length = 3004
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 206 PFRP-SDAIFVPWVRLTRVVPTCLLVNMDGALTS 108
PFRP + +FVPW R+ + P + ++ D TS
Sbjct: 963 PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996
>BT016036-1|AAV36921.1| 1281|Drosophila melanogaster RE01954p protein.
Length = 1281
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -1
Query: 198 TLRCNFCSLGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRKAFIFTDR 19
+LRC CSL ++KG L +H + ++ T + LL N++L K I T
Sbjct: 908 SLRCQKCSLSFLEKG----DLKQHAVQHHVSMTKTNRPVRLLLNNSMLIPPPK--IRTHH 961
Query: 18 HDQP 7
+QP
Sbjct: 962 REQP 965
>AY051927-1|AAK93351.1| 587|Drosophila melanogaster LD41072p
protein.
Length = 587
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -1
Query: 198 TLRCNFCSLGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRKAFIFTDR 19
+LRC CSL ++KG L +H + ++ T + LL N++L K I T
Sbjct: 214 SLRCQKCSLSFLEKG----DLKQHAVQHHVSMTKTNRPVRLLLNNSMLIPPPK--IRTHH 267
Query: 18 HDQP 7
+QP
Sbjct: 268 REQP 271
>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
protein.
Length = 3004
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 206 PFRP-SDAIFVPWVRLTRVVPTCLLVNMDGALTS 108
PFRP + +FVPW R+ + P + ++ D TS
Sbjct: 963 PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996
>AE013599-2017|AAF58164.2| 1281|Drosophila melanogaster CG8092-PA,
isoform A protein.
Length = 1281
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -1
Query: 198 TLRCNFCSLGAIDKGGAHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRKAFIFTDR 19
+LRC CSL ++KG L +H + ++ T + LL N++L K I T
Sbjct: 908 SLRCQKCSLSFLEKG----DLKQHAVQHHVSMTKTNRPVRLLLNNSMLIPPPK--IRTHH 961
Query: 18 HDQP 7
+QP
Sbjct: 962 REQP 965
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,405,455
Number of Sequences: 53049
Number of extensions: 423421
Number of successful extensions: 1357
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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