Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_K04
         (383 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   4.9  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   6.5  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   6.5  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   6.5  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   6.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   6.5  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   6.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   8.6  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 74  YYLVINTRDHT 42
           YYLV+   DHT
Sbjct: 290 YYLVLENTDHT 300


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +1

Query: 121 K*HNEYGKAKETTVAGAHRR*GYTEAQEEGCTLLQRQQTIRNCNRLSKKCQ 273
           K  N Y K +ET+   +  R     ++E         +TI N N   KK Q
Sbjct: 51  KNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQ 101


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +1

Query: 121 K*HNEYGKAKETTVAGAHRR*GYTEAQEEGCTLLQRQQTIRNCNRLSKKCQ 273
           K  N Y K +ET+   +  R     ++E         +TI N N   KK Q
Sbjct: 51  KNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQ 101


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +1

Query: 121 K*HNEYGKAKETTVAGAHRR*GYTEAQEEGCTLLQRQQTIRNCNRLSKKCQ 273
           K  N Y K +ET+   +  R     ++E         +TI N N   KK Q
Sbjct: 51  KNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQ 101


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +1

Query: 121 K*HNEYGKAKETTVAGAHRR*GYTEAQEEGCTLLQRQQTIRNCNRLSKKCQ 273
           K  N Y K +ET+   +  R     ++E         +TI N N   KK Q
Sbjct: 51  KNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQ 101


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 291 IEEVNMIKDDGT 326
           +E ++ +KDDGT
Sbjct: 184 LESISYVKDDGT 195


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +1

Query: 121 K*HNEYGKAKETTVAGAHRR*GYTEAQEEGCTLLQRQQTIRNCNRLSKKCQ 273
           K  N Y K +ET+   +  R     ++E         +TI N N   KK Q
Sbjct: 284 KNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQ 334


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = +1

Query: 190 TEAQEEGCTLLQRQQTIRNCNRLSKKCQ*T 279
           T+ +  GC +    Q +    R  K+C  T
Sbjct: 338 TKPRARGCIIFGSDQEVAGVMRAVKRCNAT 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,015
Number of Sequences: 438
Number of extensions: 2006
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)