Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_K03
(422 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 174 9e-44
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 174 9e-44
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 174 9e-44
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 174 9e-44
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 174 9e-44
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 156 3e-38
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 77 2e-14
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 77 2e-14
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 77 2e-14
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 51 1e-06
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 50 4e-06
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 50 4e-06
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 50 4e-06
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 50 4e-06
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 50 4e-06
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 50 4e-06
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 44 3e-04
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 42 6e-04
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 42 6e-04
AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein. 29 8.5
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 174 bits (424), Expect = 9e-44
Identities = 75/132 (56%), Positives = 103/132 (78%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V +HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 207 YAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLQGGRM 386
+A ++YEL+++V+ +E ++GW+ATG+++T HS +IHEYYSRE P+H+T+DTSLQ GRM
Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211
Query: 387 GLRAYVCVALGV 422
++AYV +GV
Sbjct: 212 SIKAYVSTLMGV 223
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 174 bits (424), Expect = 9e-44
Identities = 75/132 (56%), Positives = 103/132 (78%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V +HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 207 YAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLQGGRM 386
+A ++YEL+++V+ +E ++GW+ATG+++T HS +IHEYYSRE P+H+T+DTSLQ GRM
Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211
Query: 387 GLRAYVCVALGV 422
++AYV +GV
Sbjct: 212 SIKAYVSTLMGV 223
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 174 bits (424), Expect = 9e-44
Identities = 75/132 (56%), Positives = 103/132 (78%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V +HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 207 YAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLQGGRM 386
+A ++YEL+++V+ +E ++GW+ATG+++T HS +IHEYYSRE P+H+T+DTSLQ GRM
Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211
Query: 387 GLRAYVCVALGV 422
++AYV +GV
Sbjct: 212 SIKAYVSTLMGV 223
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 174 bits (424), Expect = 9e-44
Identities = 75/132 (56%), Positives = 103/132 (78%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V +HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 151
Query: 207 YAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLQGGRM 386
+A ++YEL+++V+ +E ++GW+ATG+++T HS +IHEYYSRE P+H+T+DTSLQ GRM
Sbjct: 152 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 211
Query: 387 GLRAYVCVALGV 422
++AYV +GV
Sbjct: 212 SIKAYVSTLMGV 223
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 174 bits (424), Expect = 9e-44
Identities = 75/132 (56%), Positives = 103/132 (78%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V +HPV+L IVD+YERRN + RVIGTLLGT DK VEVTNCF VPH E D+V ++
Sbjct: 85 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDME 144
Query: 207 YAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLQGGRM 386
+A ++YEL+++V+ +E ++GW+ATG+++T HS +IHEYYSRE P+H+T+DTSLQ GRM
Sbjct: 145 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 204
Query: 387 GLRAYVCVALGV 422
++AYV +GV
Sbjct: 205 SIKAYVSTLMGV 216
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 156 bits (379), Expect = 3e-38
Identities = 69/132 (52%), Positives = 100/132 (75%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V +HPV+L VD+YERRN + RVIGTLLGT +K VEVTNCF V + E +D+V ++
Sbjct: 82 VRLHPVLLASTVDSYERRNKGAARVIGTLLGTVNKHSVEVTNCFSVSYNE-SDEVVVDME 140
Query: 207 YAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLQGGRM 386
+A ++YEL+++V+ +E ++GW+A G+++T HS +IHEYYSRE P+H+T+DTSLQ G M
Sbjct: 141 FAKNMYELHKKVSPNELILGWYAAGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGHM 200
Query: 387 GLRAYVCVALGV 422
++AYV +GV
Sbjct: 201 SIKAYVSTLMGV 212
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 77.4 bits (182), Expect = 2e-14
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHA--DQVE 194
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIVKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 195 -AELNYAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSL 371
+ +Y ++Y + ++VNA E +VGW+ TG ++ + I+E R C V V +D
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKP 128
Query: 372 QGGRMGLRAYVCV 410
+ + AY+ V
Sbjct: 129 KDLGLPTEAYISV 141
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 77.4 bits (182), Expect = 2e-14
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHA--DQVE 194
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 195 -AELNYAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSL 371
+ +Y ++Y + ++VNA E +VGW+ TG ++ + I+E R C V V +D
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKP 128
Query: 372 QGGRMGLRAYVCV 410
+ + AY+ V
Sbjct: 129 KDLGLPTEAYISV 141
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 77.4 bits (182), Expect = 2e-14
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYER--RNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHA--DQVE 194
V VHP+VL +VD + R + + RV+G LLG+ K V++V+N F VP E D V
Sbjct: 9 VVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVW 68
Query: 195 -AELNYAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSL 371
+ +Y ++Y + ++VNA E +VGW+ TG ++ + I+E R C V V +D
Sbjct: 69 FLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKP 128
Query: 372 QGGRMGLRAYVCV 410
+ + AY+ V
Sbjct: 129 KDLGLPTEAYISV 141
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 51.2 bits (117), Expect = 1e-06
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V + +V+ +I+ Y+ + V G LLG K +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVKDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 207 YAMDVYELNRRVNASENLVGWWAT---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLQ 374
Y M++ R VN VGW+ + G+ VT Y E V + D
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTA 158
Query: 375 GGRMGLRAY 401
G + L+AY
Sbjct: 159 QGSLSLKAY 167
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 49.6 bits (113), Expect = 4e-06
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V + +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 207 YAMDVYELNRRVNASENLVGWWAT---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLQ 374
Y M++ R VN VGW+ + G+ VT Y E V + D
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTA 158
Query: 375 GGRMGLRAY 401
G + L+AY
Sbjct: 159 QGSLSLKAY 167
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 49.6 bits (113), Expect = 4e-06
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V + +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 207 YAMDVYELNRRVNASENLVGWWAT---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLQ 374
Y M++ R VN VGW+ + G+ VT Y E V + D
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTA 158
Query: 375 GGRMGLRAY 401
G + L+AY
Sbjct: 159 QGSLSLKAY 167
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 49.6 bits (113), Expect = 4e-06
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V + +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 207 YAMDVYELNRRVNASENLVGWWAT---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLQ 374
Y M++ R VN VGW+ + G+ VT Y E V + D
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTA 158
Query: 375 GGRMGLRAY 401
G + L+AY
Sbjct: 159 QGSLSLKAY 167
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 49.6 bits (113), Expect = 4e-06
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V + +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 207 YAMDVYELNRRVNASENLVGWWAT---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLQ 374
Y M++ R VN VGW+ + G+ VT Y E V + D
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTA 158
Query: 375 GGRMGLRAY 401
G + L+AY
Sbjct: 159 QGSLSLKAY 167
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 49.6 bits (113), Expect = 4e-06
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V + +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 207 YAMDVYELNRRVNASENLVGWWAT---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLQ 374
Y M++ R VN VGW+ + G+ VT Y E V + D
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTA 158
Query: 375 GGRMGLRAY 401
G + L+AY
Sbjct: 159 QGSLSLKAY 167
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 49.6 bits (113), Expect = 4e-06
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Frame = +3
Query: 27 VNVHPVVLFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELN 206
V + +V+ +I+ Y+ + V G LLG + +E+TNCF P D E+
Sbjct: 39 VQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQ 98
Query: 207 YAMDVYELNRRVNASENLVGWWAT---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLQ 374
Y M++ R VN VGW+ + G+ VT Y E V + D
Sbjct: 99 YQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTA 158
Query: 375 GGRMGLRAY 401
G + L+AY
Sbjct: 159 QGSLSLKAY 167
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 43.6 bits (98), Expect = 3e-04
Identities = 33/115 (28%), Positives = 47/115 (40%), Gaps = 4/115 (3%)
Frame = +3
Query: 69 YERRNADSHRVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNA 248
Y+ + V G LLG + +E+TNCF P D E+ Y M++ R VN
Sbjct: 50 YQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNI 109
Query: 249 SENLVGWWAT---GNEVTNHSSVIHEYYSRECREPVHVTLD-TSLQGGRMGLRAY 401
VGW+ + G+ VT Y E V + D G + L+AY
Sbjct: 110 DHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAY 164
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 42.3 bits (95), Expect = 6e-04
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 18 NLSVNVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCFCVPHKEHADQ 188
++SV +HP+V+ I D + R + R VIG L+G + +EV N F + ++
Sbjct: 8 SVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEK 67
Query: 189 VEAELNYAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLD 362
+ + Y E ++V +GW+ TG +H+ P+ + L+
Sbjct: 68 IIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLN 125
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 42.3 bits (95), Expect = 6e-04
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 18 NLSVNVHPVVLFQIVDAYERRNADSHR---VIGTLLGTSDKGVVEVTNCFCVPHKEHADQ 188
++SV +HP+V+ I D + R + R VIG L+G + +EV N F + ++
Sbjct: 38 SVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEK 97
Query: 189 VEAELNYAMDVYELNRRVNASENLVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLD 362
+ + Y E ++V +GW+ TG +H+ P+ + L+
Sbjct: 98 IIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLN 155
>AB032953-1|BAA86441.2| 2144|Homo sapiens KIAA1127 protein protein.
Length = 2144
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 48 LFQIVDAYERRNADSHRVIGTLLGTSDKGVVEVTNC 155
L VDA R D + +I TLLG++D V +C
Sbjct: 738 LMYFVDATMIRKVDQNGIISTLLGSNDLTAVRPLSC 773
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,816,074
Number of Sequences: 237096
Number of extensions: 1153639
Number of successful extensions: 2981
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2974
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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