Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_J22
(506 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061245-1|AAL28793.1| 392|Drosophila melanogaster LD18447p pro... 52 3e-07
AE014134-2302|AAF53262.1| 392|Drosophila melanogaster CG5705-PA... 52 3e-07
AY121643-1|AAM51970.1| 254|Drosophila melanogaster LD09733p pro... 32 0.51
AE014297-824|AAF54294.1| 254|Drosophila melanogaster CG8359-PA ... 32 0.51
AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p pro... 31 1.2
AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubuli... 31 1.2
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P... 30 1.6
AE014296-3672|AAF51827.1| 538|Drosophila melanogaster CG11449-P... 30 1.6
AE014296-3580|AAF51749.2| 735|Drosophila melanogaster CG32438-P... 30 2.1
AE014296-3579|AAN12180.2| 992|Drosophila melanogaster CG32438-P... 30 2.1
AE014296-3578|AAN12179.2| 1025|Drosophila melanogaster CG32438-P... 30 2.1
AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA... 30 2.1
AF160944-1|AAD46884.1| 1365|Drosophila melanogaster Nup154 protein. 29 2.7
AF051398-1|AAC05386.1| 1365|Drosophila melanogaster nucleoporin ... 29 2.7
AF051397-1|AAC05385.1| 1349|Drosophila melanogaster nucleoporin ... 29 2.7
AF051396-2|AAC06248.1| 1349|Drosophila melanogaster nucleoporin ... 29 2.7
AF051396-1|AAC06247.1| 1365|Drosophila melanogaster nucleoporin ... 29 2.7
AE014134-2012|AAF53050.2| 1123|Drosophila melanogaster CG4579-PB... 29 2.7
AE014134-2011|AAF53051.1| 1365|Drosophila melanogaster CG4579-PA... 29 2.7
Y17111-1|CAA76635.1| 1365|Drosophila melanogaster Nup154 protein. 29 3.6
BT011128-1|AAR82795.1| 1084|Drosophila melanogaster LD07113p pro... 29 4.8
AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p pro... 29 4.8
AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-P... 29 4.8
AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-P... 29 4.8
AY121711-1|AAM52038.1| 518|Drosophila melanogaster RH63657p pro... 28 6.3
AE014297-2032|AAF55188.1| 518|Drosophila melanogaster CG14868-P... 28 6.3
BT001695-1|AAN71450.1| 534|Drosophila melanogaster RE59368p pro... 28 8.3
AY119087-1|AAM50947.1| 704|Drosophila melanogaster LP11564p pro... 28 8.3
AY075248-1|AAL68115.1| 540|Drosophila melanogaster AT21416p pro... 28 8.3
AF473822-1|AAL85325.1| 534|Drosophila melanogaster EH domain co... 28 8.3
AE014297-3135|AAF55980.2| 744|Drosophila melanogaster CG7069-PA... 28 8.3
AE014297-1576|AAF54856.2| 534|Drosophila melanogaster CG6148-PB... 28 8.3
AE014297-1575|AAN13552.1| 540|Drosophila melanogaster CG6148-PA... 28 8.3
AE014134-1105|AAF52394.3| 704|Drosophila melanogaster CG31638-P... 28 8.3
>AY061245-1|AAL28793.1| 392|Drosophila melanogaster LD18447p
protein.
Length = 392
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/103 (27%), Positives = 55/103 (53%)
Frame = +3
Query: 147 THSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIE 326
T L++ + +Q YL+ L E+ + N+ RL +++ +V+ LE+R L I
Sbjct: 21 TDPLSIQNEKLQAYLESLRQEYYAVRVNAAGNSKSYARLAQLEGVVSALEQRRVLERHIT 80
Query: 327 SLKELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQSILIT 455
S K++ KD +M+++++ E E+Y+ + + D L L+T
Sbjct: 81 SAKDMEAE--KDEDMRELMREENEVYVDLLGKQDQALLQELLT 121
>AE014134-2302|AAF53262.1| 392|Drosophila melanogaster CG5705-PA
protein.
Length = 392
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/103 (27%), Positives = 55/103 (53%)
Frame = +3
Query: 147 THSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIE 326
T L++ + +Q YL+ L E+ + N+ RL +++ +V+ LE+R L I
Sbjct: 21 TDPLSIQNEKLQAYLESLRQEYYAVRVNAAGNSKSYARLAQLEGVVSALEQRRVLERHIT 80
Query: 327 SLKELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQSILIT 455
S K++ KD +M+++++ E E+Y+ + + D L L+T
Sbjct: 81 SAKDMEAE--KDEDMRELMREENEVYVDLLGKQDQALLQELLT 121
>AY121643-1|AAM51970.1| 254|Drosophila melanogaster LD09733p
protein.
Length = 254
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 228 KLRRNADEIRRLHEI--KPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEI 401
+LR++ +E+ R I K + +L + D +ESLKE K + K + + A+
Sbjct: 91 RLRQSGEEVARASYIYEKELSFLLNVKAESEDDVESLKEQPKPQAKRKRVSTAAQRSAKT 150
Query: 402 YLKRINEVDGELQSILITPQV 464
KR ++ + ++ + P +
Sbjct: 151 PRKRNSDQESNIEPAIRNPAI 171
>AE014297-824|AAF54294.1| 254|Drosophila melanogaster CG8359-PA
protein.
Length = 254
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +3
Query: 228 KLRRNADEIRRLHEI--KPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEI 401
+LR++ +E+ R I K + +L + D +ESLKE K + K + + A+
Sbjct: 91 RLRQSGEEVARASYIYEKELSFLLNVKAESEDDVESLKEQPKPQAKRKRVSTAAQRSAKT 150
Query: 402 YLKRINEVDGELQSILITPQV 464
KR ++ + ++ + P +
Sbjct: 151 PRKRNSDQESNIEPAIRNPAI 171
>AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p
protein.
Length = 1351
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/91 (23%), Positives = 43/91 (47%)
Frame = +3
Query: 174 AIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKRE 353
A+ K+ I LH++ + D++ LH++ V +R+ + ++L E +E
Sbjct: 34 AVLVAKKRSKIYESLLHSETMSSQDKLEMLHQVTSEVAKNPDRVDMMLRFQNLLEGQDKE 93
Query: 354 GKDSEMKDMIKHEAEIYLKRINEVDGELQSI 446
+ ++++E+ +KRI G LQ I
Sbjct: 94 ESEITQDQDEENQSEVVIKRIKA--GPLQLI 122
>AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubulin
ring protein protein.
Length = 1351
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/85 (24%), Positives = 41/85 (48%)
Frame = +3
Query: 192 KQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEM 371
K+ I LH++ + D++ LH++ V +R+ + ++L E RE +
Sbjct: 40 KRSKIYESLLHSETMSSQDKLEMLHQVTSEVAKNPDRMDMLLRFQNLLEGQDREESEITQ 99
Query: 372 KDMIKHEAEIYLKRINEVDGELQSI 446
++++E+ +KRI G LQ I
Sbjct: 100 DQDEENQSEVVIKRIKA--GPLQLI 122
>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
protein.
Length = 1168
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +3
Query: 204 IEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMI 383
+ EK+ K + +++R+ E K EE+I + +E +KE + E E ++ +
Sbjct: 582 LREEKI--KEKEKEEKLRKEREEKMREKEREEKIKEKERVEKIKEKEREEKLKKEKEEKL 639
Query: 384 KHEAEIYLKRINE 422
K + E+ K+ E
Sbjct: 640 KEKEELLKKKEKE 652
>AE014296-3672|AAF51827.1| 538|Drosophila melanogaster CG11449-PA
protein.
Length = 538
Score = 30.3 bits (65), Expect = 1.6
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +3
Query: 183 TYLKQLMIEHEKLHAKLRRNA--DEIRRLHEIKPIVNIL---EERIALYDSIESLKELNK 347
T L + E ++ A+LR+ +E++R+ ++ + + +ER+A +++ +
Sbjct: 275 TELLRSQEEQQRAFAQLRKQRLREELQRIRDMSNVFKTMFSEQERLADLRVTAYMRDKQE 334
Query: 348 REGKDSEMKDMIKHEAEIYLKRINEVDGELQSILITPQVSERRVLLERD 494
+E + EMK + K E E +RI V E T E + L ERD
Sbjct: 335 KERQLKEMKRLAKKEFERRQQRIFTVAAEAMETRQTN--DELKYLKERD 381
>AE014296-3580|AAF51749.2| 735|Drosophila melanogaster CG32438-PA,
isoform A protein.
Length = 735
Score = 29.9 bits (64), Expect = 2.1
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Frame = +3
Query: 189 LKQLMIEHEKLHAKLRRNADEI----RRLHEIKPIVNILEER------IALYDSIESLKE 338
LKQ+ E +HA + ++ +RL ++ V+ +ER + +Y + + E
Sbjct: 179 LKQMRTEQANVHANREKEKSDLVKKQKRLEHLQMTVSQYKEREEVKQKLQVYSAKKLWVE 238
Query: 339 LNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQS--ILITPQVSERRVLLER 491
E K +EMK +K+ K N+ D LQS + + S R+ LLE+
Sbjct: 239 TQAGEAKAAEMKTQVKNAKTQSDKLKNQHDKLLQSQEQIEKEKESLRKALLEK 291
>AE014296-3579|AAN12180.2| 992|Drosophila melanogaster CG32438-PB,
isoform B protein.
Length = 992
Score = 29.9 bits (64), Expect = 2.1
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Frame = +3
Query: 189 LKQLMIEHEKLHAKLRRNADEI----RRLHEIKPIVNILEER------IALYDSIESLKE 338
LKQ+ E +HA + ++ +RL ++ V+ +ER + +Y + + E
Sbjct: 179 LKQMRTEQANVHANREKEKSDLVKKQKRLEHLQMTVSQYKEREEVKQKLQVYSAKKLWVE 238
Query: 339 LNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQS--ILITPQVSERRVLLER 491
E K +EMK +K+ K N+ D LQS + + S R+ LLE+
Sbjct: 239 TQAGEAKAAEMKTQVKNAKTQSDKLKNQHDKLLQSQEQIEKEKESLRKALLEK 291
>AE014296-3578|AAN12179.2| 1025|Drosophila melanogaster CG32438-PD,
isoform D protein.
Length = 1025
Score = 29.9 bits (64), Expect = 2.1
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Frame = +3
Query: 189 LKQLMIEHEKLHAKLRRNADEI----RRLHEIKPIVNILEER------IALYDSIESLKE 338
LKQ+ E +HA + ++ +RL ++ V+ +ER + +Y + + E
Sbjct: 179 LKQMRTEQANVHANREKEKSDLVKKQKRLEHLQMTVSQYKEREEVKQKLQVYSAKKLWVE 238
Query: 339 LNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQS--ILITPQVSERRVLLER 491
E K +EMK +K+ K N+ D LQS + + S R+ LLE+
Sbjct: 239 TQAGEAKAAEMKTQVKNAKTQSDKLKNQHDKLLQSQEQIEKEKESLRKALLEK 291
>AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA
protein.
Length = 1351
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/91 (23%), Positives = 43/91 (47%)
Frame = +3
Query: 174 AIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKRE 353
A+ K+ I LH++ + D++ LH++ V +R+ + ++L E +E
Sbjct: 34 AVLVAKKRSKIYESLLHSETMSSQDKLEMLHQVTSEVAKNPDRMDMLLRFQNLLEGQDKE 93
Query: 354 GKDSEMKDMIKHEAEIYLKRINEVDGELQSI 446
+ ++++E+ +KRI G LQ I
Sbjct: 94 ESEITQDQDEENQSEVVIKRIKA--GPLQLI 122
>AF160944-1|AAD46884.1| 1365|Drosophila melanogaster Nup154 protein.
Length = 1365
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 114 NKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKL 221
N T IPK H+L + DP I L + ++ H+ L
Sbjct: 993 NGATQTIPKIVAHTLKVKDPLIHITLYEWLLAHDML 1028
>AF051398-1|AAC05386.1| 1365|Drosophila melanogaster nucleoporin
protein.
Length = 1365
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 114 NKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKL 221
N T IPK H+L + DP I L + ++ H+ L
Sbjct: 993 NGATQTIPKIVAHTLKVKDPLIHITLYEWLLAHDML 1028
>AF051397-1|AAC05385.1| 1349|Drosophila melanogaster nucleoporin
protein.
Length = 1349
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 114 NKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKL 221
N T IPK H+L + DP I L + ++ H+ L
Sbjct: 977 NGATQTIPKIVAHTLKVKDPLIHITLYEWLLAHDML 1012
>AF051396-2|AAC06248.1| 1349|Drosophila melanogaster nucleoporin
protein.
Length = 1349
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 114 NKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKL 221
N T IPK H+L + DP I L + ++ H+ L
Sbjct: 977 NGATQTIPKIVAHTLKVKDPLIHITLYEWLLAHDML 1012
>AF051396-1|AAC06247.1| 1365|Drosophila melanogaster nucleoporin
protein.
Length = 1365
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 114 NKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKL 221
N T IPK H+L + DP I L + ++ H+ L
Sbjct: 993 NGATQTIPKIVAHTLKVKDPLIHITLYEWLLAHDML 1028
>AE014134-2012|AAF53050.2| 1123|Drosophila melanogaster CG4579-PB,
isoform B protein.
Length = 1123
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 114 NKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKL 221
N T IPK H+L + DP I L + ++ H+ L
Sbjct: 751 NGATQTIPKIVAHTLKVKDPLIHITLYEWLLAHDML 786
>AE014134-2011|AAF53051.1| 1365|Drosophila melanogaster CG4579-PA,
isoform A protein.
Length = 1365
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 114 NKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKL 221
N T IPK H+L + DP I L + ++ H+ L
Sbjct: 993 NGATQTIPKIVAHTLKVKDPLIHITLYEWLLAHDML 1028
>Y17111-1|CAA76635.1| 1365|Drosophila melanogaster Nup154 protein.
Length = 1365
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 114 NKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKL 221
N T IPK H+L + DP I L + ++ H+ L
Sbjct: 993 NGATQTIPKIEAHTLKVKDPLIHITLYEWLLAHDML 1028
>BT011128-1|AAR82795.1| 1084|Drosophila melanogaster LD07113p
protein.
Length = 1084
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 294 EERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQSIL 449
E+ L +ES + ++ EG+ SE+K+ I+ EA + + +E +++S L
Sbjct: 596 EDPFQLKSQVESSQLKSQVEGESSELKNQIQEEAYEPISQADEEPSQIRSQL 647
>AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p
protein.
Length = 1193
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 294 EERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQSIL 449
E+ L +ES + ++ EG+ SE+K+ I+ EA + + +E +++S L
Sbjct: 498 EDPFQLKSQVESSQLKSQVEGESSELKNQIQEEAYEPISQADEEPSQIRSQL 549
>AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-PB,
isoform B protein.
Length = 1304
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 294 EERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQSIL 449
E+ L +ES + ++ EG+ SE+K+ I+ EA + + +E +++S L
Sbjct: 609 EDPFQLKSQVESSQLKSQVEGESSELKNQIQEEAYEPISQADEEPSQIRSQL 660
>AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-PA,
isoform A protein.
Length = 1469
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 294 EERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQSIL 449
E+ L +ES + ++ EG+ SE+K+ I+ EA + + +E +++S L
Sbjct: 774 EDPFQLKSQVESSQLKSQVEGESSELKNQIQEEAYEPISQADEEPSQIRSQL 825
>AY121711-1|AAM52038.1| 518|Drosophila melanogaster RH63657p
protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/87 (27%), Positives = 35/87 (40%)
Frame = +3
Query: 81 RLIVYRSLLYTNKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRR 260
RL+ +L NKY K L L+ +I Y L + +K KL +
Sbjct: 217 RLLDIDGVLLENKYLHERVKIQDSELELTKQSINKYKTMLDAKRKKGIVKLGGGSTNEDT 276
Query: 261 LHEIKPIVNILEERIALYDSIESLKEL 341
+ + + ILE I L ESL +L
Sbjct: 277 ILSPRQVKTILESGIELPQKTESLSDL 303
>AE014297-2032|AAF55188.1| 518|Drosophila melanogaster CG14868-PA
protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.3
Identities = 24/87 (27%), Positives = 35/87 (40%)
Frame = +3
Query: 81 RLIVYRSLLYTNKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRR 260
RL+ +L NKY K L L+ +I Y L + +K KL +
Sbjct: 217 RLLDIDGVLLENKYLHERVKIQDSELELTKQSINKYKTMLDAKRKKGIVKLGGGSTNEDT 276
Query: 261 LHEIKPIVNILEERIALYDSIESLKEL 341
+ + + ILE I L ESL +L
Sbjct: 277 ILSPRQVKTILESGIELPQKTESLSDL 303
>BT001695-1|AAN71450.1| 534|Drosophila melanogaster RE59368p
protein.
Length = 534
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 231 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIY 404
L RNA +R+L+++ I ++ + E K++ GKDS+ KD+IK+ ++Y
Sbjct: 282 LPRNA-ALRKLNDL--IKRARLAKVHAFIIAELRKDMPSVFGKDSKKKDLIKNLGQVY 336
>AY119087-1|AAM50947.1| 704|Drosophila melanogaster LP11564p
protein.
Length = 704
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 150 HSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPI-VNILEERIALYDSIE 326
HSL ++ + QL E EK+H + ++A + R + N + + S +
Sbjct: 111 HSLKREKNDLELQITQLKKEMEKVHTLMMKHAGQFHRADTSEDAEANGRDANCSPDISSD 170
Query: 327 SLKELNKREGKDSEMKDMIK 386
LK +N +G +++ + +K
Sbjct: 171 GLKNINSEDGLVTKLPNDVK 190
>AY075248-1|AAL68115.1| 540|Drosophila melanogaster AT21416p
protein.
Length = 540
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 231 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIY 404
L RNA +R+L+++ I ++ + E K++ GKDS+ KD+IK+ ++Y
Sbjct: 288 LPRNA-ALRKLNDL--IKRARLAKVHAFIIAELRKDMPSVFGKDSKKKDLIKNLGQVY 342
>AF473822-1|AAL85325.1| 534|Drosophila melanogaster EH domain
containing protein protein.
Length = 534
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 231 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIY 404
L RNA +R+L+++ I ++ + E K++ GKDS+ KD+IK+ ++Y
Sbjct: 282 LPRNA-ALRKLNDL--IKRARLAKVHAFIIAELRKDMPSVFGKDSKKKDLIKNLGQVY 336
>AE014297-3135|AAF55980.2| 744|Drosophila melanogaster CG7069-PA
protein.
Length = 744
Score = 27.9 bits (59), Expect = 8.3
Identities = 26/102 (25%), Positives = 47/102 (46%)
Frame = +3
Query: 201 MIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDM 380
+ E ++ A+ R ADE RR E + + E+R + K+ N+ E K E ++
Sbjct: 575 LAEEKRKEAEKCRKADEERRKEEAEKCRKLEEDRKC---KLAEEKKRNEEELKIIE-AEV 630
Query: 381 IKHEAEIYLKRINEVDGELQSILITPQVSERRVLLERDCWCR 506
K EA KR+ E + + + ++ Q +E + E C+
Sbjct: 631 AKLEAAEKAKRLKEEEKKKEELMKCKQRNEAKKKREEAERCK 672
>AE014297-1576|AAF54856.2| 534|Drosophila melanogaster CG6148-PB,
isoform B protein.
Length = 534
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 231 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIY 404
L RNA +R+L+++ I ++ + E K++ GKDS+ KD+IK+ ++Y
Sbjct: 282 LPRNA-ALRKLNDL--IKRARLAKVHAFIIAELRKDMPSVFGKDSKKKDLIKNLGQVY 336
>AE014297-1575|AAN13552.1| 540|Drosophila melanogaster CG6148-PA,
isoform A protein.
Length = 540
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 231 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIY 404
L RNA +R+L+++ I ++ + E K++ GKDS+ KD+IK+ ++Y
Sbjct: 288 LPRNA-ALRKLNDL--IKRARLAKVHAFIIAELRKDMPSVFGKDSKKKDLIKNLGQVY 342
>AE014134-1105|AAF52394.3| 704|Drosophila melanogaster CG31638-PA
protein.
Length = 704
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 150 HSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPI-VNILEERIALYDSIE 326
HSL ++ + QL E EK+H + ++A + R + N + + S +
Sbjct: 111 HSLKREKNDLELQITQLKKEMEKVHTLMMKHAGQFHRADTSEDAEANGRDANCSPDISSD 170
Query: 327 SLKELNKREGKDSEMKDMIK 386
LK +N +G +++ + +K
Sbjct: 171 GLKNINSEDGLVTKLPNDVK 190
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,416,691
Number of Sequences: 53049
Number of extensions: 323051
Number of successful extensions: 943
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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