Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_J22
(506 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 33 0.16
Z75550-12|CAA99920.2| 356|Caenorhabditis elegans Hypothetical p... 30 0.84
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 0.84
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 29 1.5
L14429-4|AAA28217.2| 171|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL117200-8|CAB55060.1| 183|Caenorhabditis elegans Hypothetical ... 29 2.6
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 3.4
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 28 3.4
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 28 4.5
Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 27 5.9
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 27 5.9
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 27 5.9
Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 27 7.8
Z67755-1|CAA91754.1| 254|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 7.8
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 7.8
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 7.8
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 7.8
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 7.8
AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical ... 27 7.8
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 27 7.8
AC006679-7|AAK84463.1| 531|Caenorhabditis elegans Lipid deplete... 27 7.8
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 32.7 bits (71), Expect = 0.16
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Frame = +3
Query: 189 LKQLMIEHEKLHAKLRRNADEIRRLHEI--KPIVNILEERIALYDS---IESLKELNKRE 353
L ++ +++E+ K+ ++DEI L ++ K V + EE + +E+LK +E
Sbjct: 192 LTEINVDNER---KISNSSDEIFSLQDLLGKTKVQLEEETEKVLQERTIVENLKAQFLKE 248
Query: 354 GKDSEMK-DMIKHEAEIYLKRINE 422
K+S K ++I+ EAE Y KRI E
Sbjct: 249 RKESTEKIELIQKEAEDYRKRIEE 272
>Z75550-12|CAA99920.2| 356|Caenorhabditis elegans Hypothetical
protein T22C1.1 protein.
Length = 356
Score = 30.3 bits (65), Expect = 0.84
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 198 LMIEHEKLHAKLRRNADEIRRLHEIKPIVNIL--EERIALYDSIESLKELNKREGKDSEM 371
L IEH AKL + AD +R ++E+ +L E+ IA +DS K + +D EM
Sbjct: 235 LCIEH--FRAKLCKCADCVR-VYEMADCEFLLDDEDDIATFDSESRKKVEENKTTEDDEM 291
Query: 372 KDMIK 386
++M+K
Sbjct: 292 REMVK 296
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 30.3 bits (65), Expect = 0.84
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 228 KLRRNADEIRRLHEIKPIVN-ILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIY 404
K+R +++RR + + +L+E +YD S +LN +G + + + E++
Sbjct: 2392 KIREKINDLRRRKQESDLAEALLQELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKI 2451
Query: 405 LKRINEV 425
++IN++
Sbjct: 2452 REKINDL 2458
Score = 30.3 bits (65), Expect = 0.84
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 228 KLRRNADEIRRLHEIKPIVN-ILEERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIY 404
K+R +++RR + + +L+E +YD S +LN +G + + + E++
Sbjct: 2450 KIREKINDLRRRKQESDLAEALLQELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKI 2509
Query: 405 LKRINEV 425
++IN++
Sbjct: 2510 REKINDL 2516
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +3
Query: 174 AIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKRE 353
A++T ++ L E EKL L + + E+K VN R L D + +K +
Sbjct: 152 AVETLVEALRAEKEKLEKILEDARKKDDEIEELKKKVNSESSRATLADEAVQKLQTDKDK 211
Query: 354 GKDSEMKDM 380
++ M DM
Sbjct: 212 LEEEYMNDM 220
>L14429-4|AAA28217.2| 171|Caenorhabditis elegans Hypothetical
protein ZK652.8 protein.
Length = 171
Score = 28.7 bits (61), Expect = 2.6
Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 12/143 (8%)
Frame = +3
Query: 105 LYTNKYTVLIPKCYTHSLNLSDPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIV 284
+Y + I KC S N + +K+ + HEKL A+L + ++++ I+
Sbjct: 5 IYKHVSFFCISKCMDKSRNFQPNEGEEEMKKSWVRHEKLCAQLEACSLDLKQNEAQMTIL 64
Query: 285 NIL-EERIALYDSIESLKELNKREGKDSEMKDMIKH------EAEIYLKRINE-----VD 428
E + I L + K G+ E++++ K + I+L +++ VD
Sbjct: 65 TATGGELKEKHKKIRGLLDEAKANGQQKELEELSKEIENVETQTRIWLNELHDVHDKRVD 124
Query: 429 GELQSILITPQVSERRVLLERDC 497
+ Q I + +V + ++ C
Sbjct: 125 IDCQMIRLGSEVKKNETYVQLAC 147
>AL117200-8|CAB55060.1| 183|Caenorhabditis elegans Hypothetical
protein Y50E8A.12 protein.
Length = 183
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 168 DPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIK 275
DP T+L + + H K K ADE RR HEIK
Sbjct: 147 DPNSMTFLMKTIFLHVK---KTMEEADEARRKHEIK 179
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
protein K04G2.8b protein.
Length = 1188
Score = 28.3 bits (60), Expect = 3.4
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Frame = +3
Query: 96 RSLLYTNKYTVLIPK---CYTHSLN------LSDPAIQTYLKQLMIEHEKLHAKLRRNAD 248
RSLL T T+L C T++L + DP +Q ++Q M ++L+ N D
Sbjct: 357 RSLLITRMLTLLKSASFTCVTNTLGAIANLIVKDPHMQQMIRQDMAAVQQLNVLRNSNRD 416
Query: 249 EIRRLHEIKPIVNILEE 299
+IR +K ++N L +
Sbjct: 417 DIRT--AVKSVLNTLNQ 431
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
protein K04G2.8a protein.
Length = 1186
Score = 28.3 bits (60), Expect = 3.4
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Frame = +3
Query: 96 RSLLYTNKYTVLIPK---CYTHSLN------LSDPAIQTYLKQLMIEHEKLHAKLRRNAD 248
RSLL T T+L C T++L + DP +Q ++Q M ++L+ N D
Sbjct: 357 RSLLITRMLTLLKSASFTCVTNTLGAIANLIVKDPHMQQMIRQDMAAVQQLNVLRNSNRD 416
Query: 249 EIRRLHEIKPIVNILEE 299
+IR +K ++N L +
Sbjct: 417 DIRT--AVKSVLNTLNQ 431
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 28.3 bits (60), Expect = 3.4
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Frame = +3
Query: 96 RSLLYTNKYTVLIPK---CYTHSLN------LSDPAIQTYLKQLMIEHEKLHAKLRRNAD 248
RSLL T T+L C T++L + DP +Q ++Q M ++L+ N D
Sbjct: 357 RSLLITRMLTLLKSASFTCVTNTLGAIANLIVKDPHMQQMIRQDMAAVQQLNVLRNSNRD 416
Query: 249 EIRRLHEIKPIVNILEE 299
+IR +K ++N L +
Sbjct: 417 DIRT--AVKSVLNTLNQ 431
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +3
Query: 333 KELNKREGKDSEMKDMIKHEAEIYLKRINEVDGELQSILITPQVSERRVLLERD 494
KEL++++ ++ ++ + E E+Y +R+ E++ E+ L ++ R+ ERD
Sbjct: 167 KELSEKKHENERLQRIYASEREMYNRRMEEMESEVDQQLELTEMKARQE--ERD 218
>Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical
protein F14F8.12 protein.
Length = 329
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 422 FINTF*VYLSLVLYHILHLAVFTFSFVQFL 333
FI TF + L ++L++ILH+ TF + FL
Sbjct: 71 FIATF-ILLFIILFYILHILQQTFHVILFL 99
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/97 (19%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 180 QTYLKQLMIEHEKLHAKLRRNADEIRRLH-EIKPIVNILEERIALYDSIE-SLKELNKRE 353
Q ++++ + + +A++ DE++RLH ++ + + E A +E L++LN +
Sbjct: 305 QIRVQEINTQTNRQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLEKQLEDLNYQL 364
Query: 354 GKDSEMKDMIKHEAEIYLKRINEVDGELQSILITPQV 464
D + ++ + ++++ E E Q++L+ Q+
Sbjct: 365 EDDQRSYEAALNDKDAQVRKLRE---ECQALLVELQM 398
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 27.5 bits (58), Expect = 5.9
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +3
Query: 207 EHEKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIK 386
EHEK + E +R HEI+ +E + E L+++ ++E K E+ K
Sbjct: 170 EHEKRIKEQDNQFIENQRQHEIEENERKMEFERKQAEHEEKLQQIREKERKLQELLLRQK 229
Query: 387 HEAEIYLKRINEVDGELQSIL 449
EAE R D E++ L
Sbjct: 230 EEAEEEALRRLANDSEIEQKL 250
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/97 (19%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 180 QTYLKQLMIEHEKLHAKLRRNADEIRRLH-EIKPIVNILEERIALYDSIE-SLKELNKRE 353
Q ++++ + + +A++ DE++RLH ++ + + E A +E L++LN +
Sbjct: 305 QIRVQEINTQTNRQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLEKQLEDLNYQL 364
Query: 354 GKDSEMKDMIKHEAEIYLKRINEVDGELQSILITPQV 464
D + ++ + ++++ E E Q++L+ Q+
Sbjct: 365 EDDQRSYEAALNDKDAQVRKLRE---ECQALLVELQM 398
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/97 (19%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 180 QTYLKQLMIEHEKLHAKLRRNADEIRRLH-EIKPIVNILEERIALYDSIE-SLKELNKRE 353
Q ++++ + + +A++ DE++RLH ++ + + E A +E L++LN +
Sbjct: 305 QIRVQEINTQTNRQNAEINHKRDEVKRLHSQVSELKSKHAELAARNGLLEKQLEDLNYQL 364
Query: 354 GKDSEMKDMIKHEAEIYLKRINEVDGELQSILITPQV 464
D + ++ + ++++ E E Q++L+ Q+
Sbjct: 365 EDDQRSYEAALNDKDAQVRKLRE---ECQALLVELQM 398
>Z92804-2|CAB07253.2| 321|Caenorhabditis elegans Hypothetical
protein K05D4.3 protein.
Length = 321
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 111 YIIKNGIQLILKMTFPFNTDKIMIIVFLYFI 19
YI+ G +I+ + F N+ + I+VFL+ I
Sbjct: 76 YILHFGFYVIVIICFALNSSTLFILVFLFLI 106
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 7.8
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +3
Query: 231 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMI 383
LRR E + E+K ++ILE+RIA DS SL+E + +++E++D +
Sbjct: 910 LRRQDSEKMLVLELKKQISILEKRIA--DSNSSLEEC---KIQNAELRDQL 955
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 7.8
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +3
Query: 231 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMI 383
LRR E + E+K ++ILE+RIA DS SL+E + +++E++D +
Sbjct: 910 LRRQDSEKMLVLELKKQISILEKRIA--DSNSSLEEC---KIQNAELRDQL 955
>Z67755-1|CAA91754.1| 254|Caenorhabditis elegans Hypothetical
protein F54F7.1 protein.
Length = 254
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 330 LKELNKRE-GKDSEMKDMIKHEAEIYLKRINEVDGELQSI 446
+K KR K E K M E EI LKR+ D E QS+
Sbjct: 171 MKNAKKRRFRKKKEKKTMAVEEIEIELKRLLRSDLEAQSV 210
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 7.8
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +3
Query: 231 LRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMI 383
LRR E + E+K ++ILE+RIA DS SL+E + +++E++D +
Sbjct: 910 LRRQDSEKMLVLELKKQISILEKRIA--DSNSSLEEC---KIQNAELRDQL 955
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.1 bits (57), Expect = 7.8
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 315 DSIESLKELNKREGKDSEMKDMIKHEAEIYLKR--INEVDGELQSILITPQVSERRV 479
+SIE EL R G DS+ K + + EAE+ R +NE G L+ + Q SE+ V
Sbjct: 450 ESIERNIELESR-GDDSQRK-IAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNV 504
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.1 bits (57), Expect = 7.8
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 315 DSIESLKELNKREGKDSEMKDMIKHEAEIYLKR--INEVDGELQSILITPQVSERRV 479
+SIE EL R G DS+ K + + EAE+ R +NE G L+ + Q SE+ V
Sbjct: 523 ESIERNIELESR-GDDSQRK-IAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNV 577
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.1 bits (57), Expect = 7.8
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 315 DSIESLKELNKREGKDSEMKDMIKHEAEIYLKR--INEVDGELQSILITPQVSERRV 479
+SIE EL R G DS+ K + + EAE+ R +NE G L+ + Q SE+ V
Sbjct: 523 ESIERNIELESR-GDDSQRK-IAELEAELRRNREKLNEAQGALKKLHEMAQDSEKNV 577
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 108 IIKNGIQLILKMTFPFNTDKIMIIVFLYFIFLLSSC 1
I N + LI F F ++ I FL FIF LS+C
Sbjct: 394 IFMNLLTLISLFWFNFINNRASRIFFLLFIFSLSTC 429
>AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical
protein F59B1.8 protein.
Length = 420
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +3
Query: 213 EKLHAKLRRNADEIRRLHEIKPIVNILEERIALYDSIESLKELNKREGKDSEMKDMIKHE 392
E + + R+ E + E++PI+ L AL S ES + L+ E + + DM+ +
Sbjct: 161 EFVEGSVVRHCYENVTVDELQPILKALARLQALSLSTESCRNLDNGEAFEESLMDMLSED 220
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +3
Query: 294 EERIALYDSIESLKELNKREGKDSEMKDMIKHEAEIYLKRIN 419
E+ + Y+ E +E + EGK++ + +++E + Y+K +N
Sbjct: 918 EDEESEYEDEEEDEEEEEEEGKENNEEKKVQNEIKHYIKLVN 959
>AC006679-7|AAK84463.1| 531|Caenorhabditis elegans Lipid depleted
protein 7 protein.
Length = 531
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 168 DPAIQTYLKQLMIEHEKLHAKLRRNADEIRRLHEIKPIVN---ILEERIALYDS 320
+P I + + + H K ++ D++++L+E KP+ + I++ER + S
Sbjct: 76 EPIINKFRDYKVFLRKLNHLKAKKEEDKLKKLYENKPVYSLDTIVKERFPTFGS 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,019,313
Number of Sequences: 27780
Number of extensions: 189229
Number of successful extensions: 685
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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