Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_J20
         (576 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56257-1|AAC32928.1|  259|Drosophila melanogaster intronic prote...   334   5e-92
AY118472-1|AAM49841.1|  259|Drosophila melanogaster GM13959p pro...   334   5e-92
AE014134-1874|AAF52940.2|  259|Drosophila melanogaster CG5277-PA...   334   5e-92
BT029408-1|ABK57065.1|  134|Drosophila melanogaster IP02459p pro...    29   3.4  
BT023293-1|AAY55709.1|  128|Drosophila melanogaster IP02458p pro...    29   3.4  
AE014298-2843|AAF48956.2|  128|Drosophila melanogaster CG32531-P...    29   3.4  
AY069745-1|AAL39890.1|  325|Drosophila melanogaster LP07727p pro...    29   6.0  
AE013599-842|AAF58957.2|  325|Drosophila melanogaster CG2063-PA ...    29   6.0  
BT003221-1|AAO24976.1|  534|Drosophila melanogaster RE03224p pro...    28   7.9  
AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p pro...    28   7.9  
AJ252086-1|CAB64598.2|  534|Drosophila melanogaster spaghetti pr...    28   7.9  
AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ...    28   7.9  
AE014297-3694|AAF56383.3|  331|Drosophila melanogaster CG31107-P...    28   7.9  
AE013599-3831|AAF47175.1|  534|Drosophila melanogaster CG13570-P...    28   7.9  

>U56257-1|AAC32928.1|  259|Drosophila melanogaster intronic protein
           259 protein.
          Length = 259

 Score =  334 bits (821), Expect = 5e-92
 Identities = 160/175 (91%), Positives = 166/175 (94%)
 Frame = -3

Query: 574 LPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKA 395
           LP YLLDR +QS AKVLSNMIKQKRKEKAGKWDVPIPKVRAQ+DAEVFKVL++GKTKRKA
Sbjct: 85  LPHYLLDRGIQSSAKVLSNMIKQKRKEKAGKWDVPIPKVRAQSDAEVFKVLKTGKTKRKA 144

Query: 394 WKRMVTKVTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSS 215
           WKRMVTKVT+VGENFTRKPPKFERFIRPM LR KKAHVTHPELKATF LPIIGVKKNPSS
Sbjct: 145 WKRMVTKVTFVGENFTRKPPKFERFIRPMGLRMKKAHVTHPELKATFNLPIIGVKKNPSS 204

Query: 214 QMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 50
            M+TSLGVITKGTVIEVNISELGLVTQ GKVVWGKYAQVTNNPENDG INAVLLV
Sbjct: 205 PMFTSLGVITKGTVIEVNISELGLVTQTGKVVWGKYAQVTNNPENDGVINAVLLV 259


>AY118472-1|AAM49841.1|  259|Drosophila melanogaster GM13959p
           protein.
          Length = 259

 Score =  334 bits (821), Expect = 5e-92
 Identities = 160/175 (91%), Positives = 166/175 (94%)
 Frame = -3

Query: 574 LPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKA 395
           LP YLLDR +QS AKVLSNMIKQKRKEKAGKWDVPIPKVRAQ+DAEVFKVL++GKTKRKA
Sbjct: 85  LPHYLLDRGIQSSAKVLSNMIKQKRKEKAGKWDVPIPKVRAQSDAEVFKVLKTGKTKRKA 144

Query: 394 WKRMVTKVTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSS 215
           WKRMVTKVT+VGENFTRKPPKFERFIRPM LR KKAHVTHPELKATF LPIIGVKKNPSS
Sbjct: 145 WKRMVTKVTFVGENFTRKPPKFERFIRPMGLRMKKAHVTHPELKATFNLPIIGVKKNPSS 204

Query: 214 QMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 50
            M+TSLGVITKGTVIEVNISELGLVTQ GKVVWGKYAQVTNNPENDG INAVLLV
Sbjct: 205 PMFTSLGVITKGTVIEVNISELGLVTQTGKVVWGKYAQVTNNPENDGVINAVLLV 259


>AE014134-1874|AAF52940.2|  259|Drosophila melanogaster CG5277-PA
           protein.
          Length = 259

 Score =  334 bits (821), Expect = 5e-92
 Identities = 160/175 (91%), Positives = 166/175 (94%)
 Frame = -3

Query: 574 LPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKA 395
           LP YLLDR +QS AKVLSNMIKQKRKEKAGKWDVPIPKVRAQ+DAEVFKVL++GKTKRKA
Sbjct: 85  LPHYLLDRGIQSSAKVLSNMIKQKRKEKAGKWDVPIPKVRAQSDAEVFKVLKTGKTKRKA 144

Query: 394 WKRMVTKVTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPSS 215
           WKRMVTKVT+VGENFTRKPPKFERFIRPM LR KKAHVTHPELKATF LPIIGVKKNPSS
Sbjct: 145 WKRMVTKVTFVGENFTRKPPKFERFIRPMGLRMKKAHVTHPELKATFNLPIIGVKKNPSS 204

Query: 214 QMYTSLGVITKGTVIEVNISELGLVTQAGKVVWGKYAQVTNNPENDGCINAVLLV 50
            M+TSLGVITKGTVIEVNISELGLVTQ GKVVWGKYAQVTNNPENDG INAVLLV
Sbjct: 205 PMFTSLGVITKGTVIEVNISELGLVTQTGKVVWGKYAQVTNNPENDGVINAVLLV 259


>BT029408-1|ABK57065.1|  134|Drosophila melanogaster IP02459p
           protein.
          Length = 134

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 553 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEV 434
           RDV+ R  V  N +++ R     K D+  P++R  ADAE+
Sbjct: 42  RDVKRRKCVKENAVERLRVNSLRKNDILPPELREVADAEI 81


>BT023293-1|AAY55709.1|  128|Drosophila melanogaster IP02458p
           protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 553 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEV 434
           RDV+ R  V  N +++ R     K D+  P++R  ADAE+
Sbjct: 36  RDVKRRKCVKENAVERLRVNSLRKNDILPPELREVADAEI 75


>AE014298-2843|AAF48956.2|  128|Drosophila melanogaster CG32531-PA
           protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 553 RDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEV 434
           RDV+ R  V  N +++ R     K D+  P++R  ADAE+
Sbjct: 36  RDVKRRKCVKENAVERLRVNSLRKNDILPPELREVADAEI 75


>AY069745-1|AAL39890.1|  325|Drosophila melanogaster LP07727p
           protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 556 DRDVQSRAKVLSNMIKQKRKEKAGKWDVPIP 464
           D D   +A  L+  ++++ K++  KWD P P
Sbjct: 259 DMDKVEQATALARKVEEEAKKRKSKWDQPAP 289


>AE013599-842|AAF58957.2|  325|Drosophila melanogaster CG2063-PA
           protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 556 DRDVQSRAKVLSNMIKQKRKEKAGKWDVPIP 464
           D D   +A  L+  ++++ K++  KWD P P
Sbjct: 259 DMDKVEQATALARKVEEEAKKRKSKWDQPAP 289


>BT003221-1|AAO24976.1|  534|Drosophila melanogaster RE03224p
           protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 20/97 (20%), Positives = 35/97 (36%)
 Frame = -3

Query: 556 DRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKAWKRMVT 377
           + + +   K++     + +     K  V +PKV+ Q       + +S +           
Sbjct: 337 ETETRKDTKIVPESDNEAKPSAPKKTAVEVPKVQTQVSPPKTTIERSPEVNTV----QTE 392

Query: 376 KVTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPEL 266
           K+     N    P   ERF+ P      + HVT  EL
Sbjct: 393 KIEQASSNNAMSPSPIERFLPPAPTSTAQFHVTWKEL 429


>AY118638-1|AAM50007.1| 1775|Drosophila melanogaster SD02391p
           protein.
          Length = 1775

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = -3

Query: 457 RAQADAEVFKVLQSGKTKRKAWKRMVTKVTYVGENFTRKPPKFERFIRPMALRFKK 290
           R +AD EVF++ Q     R+   ++  ++  +G+    +P   E   R +  + KK
Sbjct: 194 RQEADQEVFQLGQKNSRLREEISKLQEEIHNLGQRVNEEPTAVEDLRRQLEAKSKK 249


>AJ252086-1|CAB64598.2|  534|Drosophila melanogaster spaghetti
           protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 20/97 (20%), Positives = 35/97 (36%)
 Frame = -3

Query: 556 DRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKAWKRMVT 377
           + + +   K++     + +     K  V +PKV+ Q       + +S +           
Sbjct: 337 ETETRKDTKIVPESDNEAKPSAPKKTAVEVPKVQTQVSPPKTTIERSPEVNTV----QTE 392

Query: 376 KVTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPEL 266
           K+     N    P   ERF+ P      + HVT  EL
Sbjct: 393 KIEQASSNNAMSPSPIERFLPPAPTSTAQFHVTWKEL 429


>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
            protein.
          Length = 2779

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = -3

Query: 457  RAQADAEVFKVLQSGKTKRKAWKRMVTKVTYVGENFTRKPPKFERFIRPMALRFKK 290
            R +AD EVF++ Q     R+   ++  ++  +G+    +P   E   R +  + KK
Sbjct: 1198 RQEADQEVFQLGQENSRLREEISKLQEEIHNLGQRVNEEPTAVEDLRRQLEAKSKK 1253


>AE014297-3694|AAF56383.3|  331|Drosophila melanogaster CG31107-PA
           protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 390 FQAFLFVLP-DCNTLNTSASACALTFGIGTSHLPAFSLRFC 509
           +  F FV+  DCN  NT A        I TS LPA  L++C
Sbjct: 23  YYLFFFVISCDCNYTNTYAKPN----NISTSPLPAVKLKYC 59


>AE013599-3831|AAF47175.1|  534|Drosophila melanogaster CG13570-PA
           protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 20/97 (20%), Positives = 35/97 (36%)
 Frame = -3

Query: 556 DRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKAWKRMVT 377
           + + +   K++     + +     K  V +PKV+ Q       + +S +           
Sbjct: 337 ETETRKDTKIVPESDNEAKPSAPKKTAVEVPKVQTQVSPPKTTIERSPEVNTV----QTE 392

Query: 376 KVTYVGENFTRKPPKFERFIRPMALRFKKAHVTHPEL 266
           K+     N    P   ERF+ P      + HVT  EL
Sbjct: 393 KIEQASSNNAMSPSPIERFLPPAPTSTAQFHVTWKEL 429


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,822,474
Number of Sequences: 53049
Number of extensions: 557927
Number of successful extensions: 1626
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1626
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)