Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_J16
(319 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 174 1e-44
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 174 1e-44
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 174 1e-44
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 55 1e-08
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 45 1e-05
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 45 1e-05
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 0.41
Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical p... 29 0.55
Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical pr... 29 0.55
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 0.55
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 28 1.3
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 1.3
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 1.3
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 1.3
AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical ... 27 2.9
Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z99277-6|CAB16484.1| 677|Caenorhabditis elegans Hypothetical pr... 26 5.1
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 26 5.1
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 26 5.1
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 26 5.1
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 26 5.1
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 26 5.1
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 26 6.8
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 26 6.8
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 26 6.8
AF036700-1|AAB88364.1| 258|Caenorhabditis elegans Hypothetical ... 26 6.8
Z81069-6|CAB02993.1| 237|Caenorhabditis elegans Hypothetical pr... 25 8.9
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 25 8.9
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 25 8.9
U46753-6|AAO21474.1| 740|Caenorhabditis elegans Hypothetical pr... 25 8.9
U46753-5|ABB88235.1| 803|Caenorhabditis elegans Hypothetical pr... 25 8.9
U46753-4|AAO21475.1| 764|Caenorhabditis elegans Hypothetical pr... 25 8.9
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 174 bits (424), Expect = 1e-44
Identities = 80/103 (77%), Positives = 88/103 (85%)
Frame = +2
Query: 11 GQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPL 190
GQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPL
Sbjct: 317 GQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPL 376
Query: 191 CVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKVTK 319
CVESF ++ PLGRFAVRDMRQTVAVGVIK+V + GKVTK
Sbjct: 377 CVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGKVTK 419
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 174 bits (424), Expect = 1e-44
Identities = 80/103 (77%), Positives = 88/103 (85%)
Frame = +2
Query: 11 GQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPL 190
GQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPL
Sbjct: 351 GQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPL 410
Query: 191 CVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKVTK 319
CVESF ++ PLGRFAVRDMRQTVAVGVIK+V + GKVTK
Sbjct: 411 CVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGKVTK 453
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 174 bits (424), Expect = 1e-44
Identities = 80/103 (77%), Positives = 88/103 (85%)
Frame = +2
Query: 11 GQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPL 190
GQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+KPL
Sbjct: 351 GQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPL 410
Query: 191 CVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKVTK 319
CVESF ++ PLGRFAVRDMRQTVAVGVIK+V + GKVTK
Sbjct: 411 CVESFTDYAPLGRFAVRDMRQTVAVGVIKSVEKSDGSSGKVTK 453
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 54.8 bits (126), Expect = 1e-08
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +2
Query: 17 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCV 196
I++GY+ VL +A + +D++TG+ + K +K + I+ L +P +
Sbjct: 444 IASGYSCVLHIQSAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEKCIMRLESPEPFVL 501
Query: 197 ESFQEFPPLGRFAVRDMRQTVAVG-VIKAV 283
E F+E+P LGRF +RD +T+A+G V+K V
Sbjct: 502 EPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +2
Query: 17 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCV 196
I G L H+ + C F + +++ G+ + P+ I G +A+V + + +
Sbjct: 500 IIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAI 559
Query: 197 ESFQEFPPLGRFAVRDMRQTVAVGVIKAV 283
E+F LGR R T+A G+++ V
Sbjct: 560 ETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +2
Query: 17 ISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCV 196
I G L H+ + C F + +++ G+ + P+ I G +A+V + + +
Sbjct: 518 IIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAI 577
Query: 197 ESFQEFPPLGRFAVRDMRQTVAVGVIKAV 283
E+F LGR R T+A G+++ V
Sbjct: 578 ETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 0.41
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 43 GLPHSPHSLQICRNQRESRPSYW*INR 123
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>Z81476-10|CAN86579.1| 224|Caenorhabditis elegans Hypothetical
protein C25F9.13 protein.
Length = 224
Score = 29.5 bits (63), Expect = 0.55
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 102 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 221
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFLNLKLSIVPSTKWRPPSSCTMYPANSTFP 188
>Z81476-1|CAB03921.2| 431|Caenorhabditis elegans Hypothetical
protein C25F9.1 protein.
Length = 431
Score = 29.5 bits (63), Expect = 0.55
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 102 VVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSPSRNSHP 221
++L++ T L L + P + W PPS C P+ ++ P
Sbjct: 149 LILISSLITCFFNLKLEIVPSTKWRPPSSCTMYPANSTFP 188
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 29.5 bits (63), Expect = 0.55
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 75 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWS 200
LPK+ T V + TT+ P +PP +T PP +S
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPPITTTYS 305
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 251 ASCHARRNDRGVGIPGRTPHTGAW 180
+SC +NDRG P R+ +GAW
Sbjct: 15 SSCGYCKNDRGERTPARSAKSGAW 38
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 41 LDCHTAHIACKFAEIKEKVDRRTGKSTE 124
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 41 LDCHTAHIACKFAEIKEKVDRRTGKSTE 124
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 1.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 41 LDCHTAHIACKFAEIKEKVDRRTGKSTE 124
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical
protein Y55F3AM.9 protein.
Length = 379
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 77 AEIKEKVDRRTGKSTEDNPKS 139
AEI + +D+ GKSTE++P++
Sbjct: 27 AEILQSLDKSLGKSTEESPEA 47
>Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical
protein K01C8.3b protein.
Length = 705
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 147 LVMPPLSTWFPPSPCVWSPSRNSHPSVVS 233
L+MP ++ W P + P+ NS PS+++
Sbjct: 139 LIMPGITHWQHPRFHAYFPAGNSFPSIIA 167
>Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical
protein K01C8.3a protein.
Length = 650
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 147 LVMPPLSTWFPPSPCVWSPSRNSHPSVVS 233
L+MP ++ W P + P+ NS PS+++
Sbjct: 139 LIMPGITHWQHPRFHAYFPAGNSFPSIIA 167
>Z99277-6|CAB16484.1| 677|Caenorhabditis elegans Hypothetical
protein Y53C12A.1 protein.
Length = 677
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 93 KSTVVLVNQQRTTLNP-LNLVMPPLSTWFPPSPCVWSPSRNSHPSVVSP 236
+ T + ++R + P P + PP+ +WS + S P +V+P
Sbjct: 36 RETPLSTKRERQAITPRFRRPAPKMIKTMPPTRSIWSVRKESVPLLVTP 84
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 41 LDCHTAHIACKFAEIKEKVDRRTGKSTE 124
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 26.2 bits (55), Expect = 5.1
Identities = 23/74 (31%), Positives = 29/74 (39%)
Frame = +3
Query: 24 TDTHLYWIATQPT*PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSPCVWSP 203
T T + I T PT PANL T VN +T P V P T P P V +
Sbjct: 508 TPTTVGTIGTSPTAPANL----TTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTT 563
Query: 204 SRNSHPSVVSPCVT 245
+ + S + T
Sbjct: 564 TPTTTTSTTTTTTT 577
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 41 LDCHTAHIACKFAEIKEKVDRRTGKSTE 124
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 26.2 bits (55), Expect = 5.1
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = -2
Query: 312 TLPPPASLKFTAFITPTATVCLMSRTAKRPRGGNSWKDSTHRGL---EGTRLTMAASP 148
T PP + + T TP TV + RT P +S + HR +G RL P
Sbjct: 346 TTVPPTTTRTTTTTTPRPTVPTVPRTTTVPSWWSSAQAPRHRDTSPRQGFRLKAVIDP 403
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 41 LDCHTAHIACKFAEIKEKVDRRTGKSTE 124
L C ++C+ + +K+K + T KS E
Sbjct: 525 LQCQNEKLSCELSSLKDKHEEATSKSIE 552
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 25.8 bits (54), Expect = 6.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 195 WSPSRNSHPSVVSPC 239
W P NSHP+V C
Sbjct: 339 WKPGTNSHPNVCQQC 353
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 25.8 bits (54), Expect = 6.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 195 WSPSRNSHPSVVSPC 239
W P NSHP+V C
Sbjct: 339 WKPGTNSHPNVCQQC 353
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 25.8 bits (54), Expect = 6.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 195 WSPSRNSHPSVVSPC 239
W P NSHP+V C
Sbjct: 339 WKPGTNSHPNVCQQC 353
>AF036700-1|AAB88364.1| 258|Caenorhabditis elegans Hypothetical
protein M04G7.1 protein.
Length = 258
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 264 TATVCLMSRTAKRPRGGNSWKDSTHRG 184
T ++CL + K P GN+ D T RG
Sbjct: 182 TCSLCLWAAATKIPNCGNTLPDCTTRG 208
>Z81069-6|CAB02993.1| 237|Caenorhabditis elegans Hypothetical
protein F25H9.6 protein.
Length = 237
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 144 NLVMPPLSTWFPPSPCVWSPSRNSH 218
NLV + W PC ++P+ N+H
Sbjct: 148 NLVTSIIRAWDLSKPCYFAPAMNTH 172
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +3
Query: 81 KSKRKSTVVLVNQQR---TTLNP--LNLVMPPLSTWFPPSPCVWSPSRNSHPSVVSP 236
+S STV+++N+ + T P ++ MP W PS P+ S+PS SP
Sbjct: 409 RSLDDSTVIMLNKSKAKPTKSEPEMMSHTMPEDRKWLYPSTQNLYPTSTSNPSSPSP 465
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = +3
Query: 81 KSKRKSTVVLVNQQR---TTLNP--LNLVMPPLSTWFPPSPCVWSPSRNSHPSVVSP 236
+S STV+++N+ + T P ++ MP W PS P+ S+PS SP
Sbjct: 409 RSLDDSTVIMLNKSKAKPTKSEPEMMSHTMPEDRKWLYPSTQNLYPTSTSNPSSPSP 465
>U46753-6|AAO21474.1| 740|Caenorhabditis elegans Hypothetical
protein C34F11.3a protein.
Length = 740
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 66 PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSP 188
PANLPK + K+T V +T+ NP + PP W P
Sbjct: 158 PANLPKHRVKNTETTV---QTSFNPPD---PPKDHWGKNDP 192
>U46753-5|ABB88235.1| 803|Caenorhabditis elegans Hypothetical
protein C34F11.3c protein.
Length = 803
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 66 PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSP 188
PANLPK + K+T V +T+ NP + PP W P
Sbjct: 221 PANLPKHRVKNTETTV---QTSFNPPD---PPKDHWGKNDP 255
>U46753-4|AAO21475.1| 764|Caenorhabditis elegans Hypothetical
protein C34F11.3b protein.
Length = 764
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 66 PANLPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPPSP 188
PANLPK + K+T V +T+ NP + PP W P
Sbjct: 182 PANLPKHRVKNTETTV---QTSFNPPD---PPKDHWGKNDP 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,827,707
Number of Sequences: 27780
Number of extensions: 203362
Number of successful extensions: 685
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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