BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_J14
(561 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071297-1|AAL48919.1| 223|Drosophila melanogaster RE32705p pro... 184 7e-47
AE014296-1551|AAN11977.1| 215|Drosophila melanogaster CG5021-PB... 182 4e-46
AE014296-1550|AAF50344.2| 218|Drosophila melanogaster CG5021-PA... 182 4e-46
DQ062772-1|AAY56645.1| 270|Drosophila melanogaster carbonic anh... 28 9.9
AY058327-1|AAL13556.1| 270|Drosophila melanogaster GH09688p pro... 28 9.9
AY051604-1|AAK93028.1| 433|Drosophila melanogaster GH24605p pro... 28 9.9
AE014298-1415|AAN09627.1| 183|Drosophila melanogaster CG32691-P... 28 9.9
AE014297-2519|AAF55554.2| 433|Drosophila melanogaster CG31232-P... 28 9.9
AE014134-2400|AAF53332.1| 270|Drosophila melanogaster CG7820-PA... 28 9.9
>AY071297-1|AAL48919.1| 223|Drosophila melanogaster RE32705p
protein.
Length = 223
Score = 184 bits (448), Expect = 7e-47
Identities = 76/115 (66%), Positives = 91/115 (79%), Gaps = 3/115 (2%)
Frame = +2
Query: 224 HPYIVFFHLIFRSSAILVYILCGWFSDSFIASFXXXXXXXSADFWTVKNISGRLLVGLRW 403
HPY+ FFHL FR +AIL+Y+ CGWFSDSFI SF SADFWTVKNISGRLLVGLRW
Sbjct: 37 HPYVTFFHLFFRGAAILIYMFCGWFSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRW 96
Query: 404 WNYVDDNGKSHWVSEAR---QFQNRINQNESRLFWMGLILCPLIWSSMFVFCLFG 559
WNYVDD+G SHWV E++ +Q+R+N+NE R+FW+GLILCP+ W F+F LFG
Sbjct: 97 WNYVDDDGVSHWVFESKNSESYQSRVNKNEQRIFWLGLILCPVFWGLFFLFALFG 151
>AE014296-1551|AAN11977.1| 215|Drosophila melanogaster CG5021-PB,
isoform B protein.
Length = 215
Score = 182 bits (442), Expect = 4e-46
Identities = 75/112 (66%), Positives = 89/112 (79%)
Frame = +2
Query: 224 HPYIVFFHLIFRSSAILVYILCGWFSDSFIASFXXXXXXXSADFWTVKNISGRLLVGLRW 403
HPY+ FFHL FR +AIL+Y+ CGWFSDSFI SF SADFWTVKNISGRLLVGLRW
Sbjct: 34 HPYVTFFHLFFRGAAILIYMFCGWFSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRW 93
Query: 404 WNYVDDNGKSHWVSEARQFQNRINQNESRLFWMGLILCPLIWSSMFVFCLFG 559
WNYVDD+G SHWV E++ +R+N+NE R+FW+GLILCP+ W F+F LFG
Sbjct: 94 WNYVDDDGVSHWVFESK--NSRVNKNEQRIFWLGLILCPVFWGLFFLFALFG 143
>AE014296-1550|AAF50344.2| 218|Drosophila melanogaster CG5021-PA,
isoform A protein.
Length = 218
Score = 182 bits (442), Expect = 4e-46
Identities = 75/112 (66%), Positives = 89/112 (79%)
Frame = +2
Query: 224 HPYIVFFHLIFRSSAILVYILCGWFSDSFIASFXXXXXXXSADFWTVKNISGRLLVGLRW 403
HPY+ FFHL FR +AIL+Y+ CGWFSDSFI SF SADFWTVKNISGRLLVGLRW
Sbjct: 37 HPYVTFFHLFFRGAAILIYMFCGWFSDSFITSFVFVVLFLSADFWTVKNISGRLLVGLRW 96
Query: 404 WNYVDDNGKSHWVSEARQFQNRINQNESRLFWMGLILCPLIWSSMFVFCLFG 559
WNYVDD+G SHWV E++ +R+N+NE R+FW+GLILCP+ W F+F LFG
Sbjct: 97 WNYVDDDGVSHWVFESK--NSRVNKNEQRIFWLGLILCPVFWGLFFLFALFG 146
>DQ062772-1|AAY56645.1| 270|Drosophila melanogaster carbonic
anhydrase 1 protein.
Length = 270
Score = 27.9 bits (59), Expect = 9.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 404 WNYVDDNGKSHWVSEARQ 457
W Y ++NG +HW E Q
Sbjct: 5 WGYTEENGPAHWAKEYPQ 22
>AY058327-1|AAL13556.1| 270|Drosophila melanogaster GH09688p
protein.
Length = 270
Score = 27.9 bits (59), Expect = 9.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 404 WNYVDDNGKSHWVSEARQ 457
W Y ++NG +HW E Q
Sbjct: 5 WGYTEENGPAHWAKEYPQ 22
>AY051604-1|AAK93028.1| 433|Drosophila melanogaster GH24605p
protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -2
Query: 518 GRGSGPSRTAGSHSGLSDSGTVVLRKPNVIFH--CHPHSSTISNQL 387
GR SG + G HS + G + PN +H P SS++ N L
Sbjct: 134 GRRSGSVQIEGHHSEVEQGGALQQDHPNPDYHSGVRPGSSSMKNVL 179
>AE014298-1415|AAN09627.1| 183|Drosophila melanogaster CG32691-PA
protein.
Length = 183
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -1
Query: 396 KPTSRRPLMFLTVQKSADSNNTTKTKLAMNESENQPQRMYTNIADERKIRWK 241
K +RR L T +K N +K+ + EN+P R DER R K
Sbjct: 111 KTATRRVLCRATKKKEWHKNRVHASKIQRSAYENEPARGKATGHDERNARKK 162
>AE014297-2519|AAF55554.2| 433|Drosophila melanogaster CG31232-PA,
isoform A protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -2
Query: 518 GRGSGPSRTAGSHSGLSDSGTVVLRKPNVIFH--CHPHSSTISNQL 387
GR SG + G HS + G + PN +H P SS++ N L
Sbjct: 134 GRRSGSVQIEGHHSEVEQGGALQQDHPNPDYHSGVRPGSSSMKNVL 179
>AE014134-2400|AAF53332.1| 270|Drosophila melanogaster CG7820-PA
protein.
Length = 270
Score = 27.9 bits (59), Expect = 9.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 404 WNYVDDNGKSHWVSEARQ 457
W Y ++NG +HW E Q
Sbjct: 5 WGYTEENGPAHWAKEYPQ 22
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,030,710
Number of Sequences: 53049
Number of extensions: 584271
Number of successful extensions: 1941
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -