BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_J12
(246 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016114-1|AAV36999.1| 949|Drosophila melanogaster LD10780p pro... 106 5e-24
AE013599-1182|AAF58744.1| 949|Drosophila melanogaster CG12325-P... 106 5e-24
AY119557-1|AAM50211.1| 330|Drosophila melanogaster GH28859p pro... 29 1.1
AE014296-3054|AAF49233.1| 330|Drosophila melanogaster CG6877-PA... 29 1.1
AY058308-1|AAL13537.1| 828|Drosophila melanogaster GH07092p pro... 27 2.6
AE014296-1712|AAF50221.1| 889|Drosophila melanogaster CG6761-PA... 27 2.6
>BT016114-1|AAV36999.1| 949|Drosophila melanogaster LD10780p
protein.
Length = 949
Score = 106 bits (254), Expect = 5e-24
Identities = 48/72 (66%), Positives = 60/72 (83%)
Frame = +1
Query: 31 SADGSCILGGGNSKHVCLYSVKDSILIKKFVITQNRSLDAVNDFINRRLLSEFGNMALVE 210
SADG CIL G S ++C+Y V+++IL+KKF ITQN SLD +NDFI+R+ LSEFGNMALVE
Sbjct: 636 SADGECILAAGKSANICIYHVREAILLKKFEITQNHSLDGLNDFISRKHLSEFGNMALVE 695
Query: 211 QREDLEGGDVNI 246
+RE+LEGG V I
Sbjct: 696 EREELEGGRVAI 707
>AE013599-1182|AAF58744.1| 949|Drosophila melanogaster CG12325-PA
protein.
Length = 949
Score = 106 bits (254), Expect = 5e-24
Identities = 48/72 (66%), Positives = 60/72 (83%)
Frame = +1
Query: 31 SADGSCILGGGNSKHVCLYSVKDSILIKKFVITQNRSLDAVNDFINRRLLSEFGNMALVE 210
SADG CIL G S ++C+Y V+++IL+KKF ITQN SLD +NDFI+R+ LSEFGNMALVE
Sbjct: 636 SADGECILAAGKSANICIYHVREAILLKKFEITQNHSLDGLNDFISRKHLSEFGNMALVE 695
Query: 211 QREDLEGGDVNI 246
+RE+LEGG V I
Sbjct: 696 EREELEGGRVAI 707
>AY119557-1|AAM50211.1| 330|Drosophila melanogaster GH28859p
protein.
Length = 330
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 241 SHPHLPGPRAVPPAPC 194
SHPHLPGP PC
Sbjct: 264 SHPHLPGPNMASVHPC 279
>AE014296-3054|AAF49233.1| 330|Drosophila melanogaster CG6877-PA
protein.
Length = 330
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 241 SHPHLPGPRAVPPAPC 194
SHPHLPGP PC
Sbjct: 264 SHPHLPGPNMASVHPC 279
>AY058308-1|AAL13537.1| 828|Drosophila melanogaster GH07092p
protein.
Length = 828
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -3
Query: 238 HPHLPGPRAVPPAPC-YRTHSTGDDL 164
H H P P A P APC + H GD L
Sbjct: 172 HSHGPLPAATPSAPCLQQAHPGGDAL 197
>AE014296-1712|AAF50221.1| 889|Drosophila melanogaster CG6761-PA
protein.
Length = 889
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -3
Query: 238 HPHLPGPRAVPPAPC-YRTHSTGDDL 164
H H P P A P APC + H GD L
Sbjct: 233 HSHGPLPAATPSAPCLQQAHPGGDAL 258
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,711,806
Number of Sequences: 53049
Number of extensions: 210263
Number of successful extensions: 725
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 24,988,368
effective HSP length: 61
effective length of database: 21,752,379
effective search space used: 435047580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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