Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_J12
         (246 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   0.74 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   1.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   1.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   3.0  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    20   3.9  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    20   3.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    19   6.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    19   6.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   6.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    19   9.1  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 22.6 bits (46), Expect = 0.74
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 97  DSILIKKFVITQNR 138
           D++LIK+ V+T NR
Sbjct: 230 DNVLIKELVVTPNR 243


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 145 DAVNDFINRRLLSEFGNM 198
           D +ND+INR   S F N+
Sbjct: 123 DDLNDYINRLNYSAFVNL 140


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 1.7
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = -1

Query: 192 TELTQQATIYKIVNSIQRSVLSYDKLLDQNRI 97
           TE+  + T  ++V+ +      +D L ++NR+
Sbjct: 434 TEICSRITPMEVVSMLNAMYSLFDTLTERNRV 465


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 3.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 135 VLSYDKLLDQNRILDAVE 82
           +  +D +LDQN+  D ++
Sbjct: 821 ISDFDAILDQNKFKDIIK 838


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 244 CSHPHLPGPRAVPPAP 197
           CSH  LP PR    +P
Sbjct: 43  CSHLCLPAPRINSKSP 58


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 244 CSHPHLPGPRAVPPAP 197
           CSH  LP PR    +P
Sbjct: 43  CSHLCLPAPRINSKSP 58


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 138  SVLSYDKLLDQNRILD 91
            ++LSYD+ +DQ   +D
Sbjct: 1253 TLLSYDEKMDQKPKMD 1268


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = -1

Query: 192 TELTQQATIYKIVNSIQRSVLSYDKLLDQ 106
           TE+   AT   ++N +Q     +D    Q
Sbjct: 501 TEICSTATPMMVINMLQNLYEQFDSFCGQ 529


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 241 SHPHLPGPRA 212
           SHPH PG  A
Sbjct: 646 SHPHEPGAPA 655


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 88  CRGRHV*SYRHPKYR 44
           C   +V +  HPKYR
Sbjct: 322 CLDPYVYAISHPKYR 336


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,169
Number of Sequences: 438
Number of extensions: 1230
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4275738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)