Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_J09
(461 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 270 2e-73
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 270 2e-73
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 270 2e-73
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 232 1e-61
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 170 4e-43
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 170 4e-43
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 156 8e-39
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 125 2e-29
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 75 2e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 75 2e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 75 2e-14
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 72 2e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 72 2e-13
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 57 7e-09
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 9e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 53 1e-07
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 42 2e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 37 3e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 37 0.008
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 35 0.033
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 35 0.033
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z66500-3|CAA91310.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.40
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.53
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 30 0.70
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.93
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.93
AF125446-1|AAY86267.1| 198|Caenorhabditis elegans Hypothetical ... 29 1.6
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 2.1
U23182-3|AAK70642.1| 252|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 3.7
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 3.7
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 3.7
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 27 6.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 27 6.5
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 27 8.6
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 270 bits (663), Expect = 2e-73
Identities = 125/135 (92%), Positives = 130/135 (96%)
Frame = +3
Query: 57 GQRKGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLD 236
G+ K HINIVVIGHVDSGKSTTTGHLIY+CGGI KRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 237 KLQAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
KL+AERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 417 EFEAGISKNGQTREH 461
EFEAGISKNGQTREH
Sbjct: 122 EFEAGISKNGQTREH 136
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 270 bits (663), Expect = 2e-73
Identities = 125/135 (92%), Positives = 130/135 (96%)
Frame = +3
Query: 57 GQRKGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLD 236
G+ K HINIVVIGHVDSGKSTTTGHLIY+CGGI KRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 237 KLQAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
KL+AERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 417 EFEAGISKNGQTREH 461
EFEAGISKNGQTREH
Sbjct: 122 EFEAGISKNGQTREH 136
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 270 bits (663), Expect = 2e-73
Identities = 125/135 (92%), Positives = 130/135 (96%)
Frame = +3
Query: 57 GQRKGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLD 236
G+ K HINIVVIGHVDSGKSTTTGHLIY+CGGI KRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 237 KLQAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
KL+AERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTG
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTG 121
Query: 417 EFEAGISKNGQTREH 461
EFEAGISKNGQTREH
Sbjct: 122 EFEAGISKNGQTREH 136
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 232 bits (567), Expect = 1e-61
Identities = 107/116 (92%), Positives = 112/116 (96%)
Frame = +3
Query: 57 GQRKGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLD 236
G+ K HINIVVIGHVDSGKSTTTGHLIY+CGGI KRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 237 KLQAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 404
KL+AERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 170 bits (414), Expect = 4e-43
Identities = 76/132 (57%), Positives = 97/132 (73%)
Frame = +3
Query: 66 KGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQ 245
K IN++V+GHVD+GKST GHL+++ + RTI+KF+ EA GK SF YAWVLD+ +
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227
Query: 246 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 425
ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 228 EERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFE 287
Query: 426 AGISKNGQTREH 461
G GQT+EH
Sbjct: 288 TGFENGGQTKEH 299
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 170 bits (414), Expect = 4e-43
Identities = 76/132 (57%), Positives = 97/132 (73%)
Frame = +3
Query: 66 KGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQ 245
K IN++V+GHVD+GKST GHL+++ + RTI+KF+ EA GK SF YAWVLD+ +
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245
Query: 246 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 425
ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE
Sbjct: 246 EERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFE 305
Query: 426 AGISKNGQTREH 461
G GQT+EH
Sbjct: 306 TGFENGGQTKEH 317
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 156 bits (378), Expect = 8e-39
Identities = 69/136 (50%), Positives = 97/136 (71%)
Frame = +3
Query: 54 NGQRKGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVL 233
+G K HIN+V +GHVD+GKST G L++ G + KRT+EK+E+EA+E G+ S+ +W +
Sbjct: 103 DGTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCM 162
Query: 234 DKLQAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 413
D ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A
Sbjct: 163 DTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARR 222
Query: 414 GEFEAGISKNGQTREH 461
GEFE G + GQTREH
Sbjct: 223 GEFETGFDRGGQTREH 238
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 125 bits (301), Expect = 2e-29
Identities = 57/66 (86%), Positives = 61/66 (92%)
Frame = +3
Query: 57 GQRKGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLD 236
G+ K HINIVVIGHVDSGKSTTTGHLIY+CGGI KRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 237 KLQAER 254
KL+ +
Sbjct: 62 KLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 74.9 bits (176), Expect = 2e-14
Identities = 53/132 (40%), Positives = 67/132 (50%)
Frame = +3
Query: 66 KGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQ 245
K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 47 KPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DNAP 91
Query: 246 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 425
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 92 EEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP 151
Query: 426 AGISKNGQTREH 461
QTREH
Sbjct: 152 -------QTREH 156
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 74.9 bits (176), Expect = 2e-14
Identities = 53/132 (40%), Positives = 67/132 (50%)
Frame = +3
Query: 66 KGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQ 245
K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DNAP 92
Query: 246 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 425
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 93 EEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP 152
Query: 426 AGISKNGQTREH 461
QTREH
Sbjct: 153 -------QTREH 157
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 74.9 bits (176), Expect = 2e-14
Identities = 53/132 (40%), Positives = 67/132 (50%)
Frame = +3
Query: 66 KGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQ 245
K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DNAP 92
Query: 246 AERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 425
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 93 EEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP 152
Query: 426 AGISKNGQTREH 461
QTREH
Sbjct: 153 -------QTREH 157
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 71.7 bits (168), Expect = 2e-13
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Frame = +3
Query: 66 KGHINIVVIGHVDSGKSTTTGHL--IYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDK 239
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 240 LQAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 419
+ E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 420 FEAGISKNGQTREH 461
E QT+EH
Sbjct: 146 ME-------QTKEH 152
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 71.7 bits (168), Expect = 2e-13
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Frame = +3
Query: 66 KGHINIVVIGHVDSGKSTTTGHL--IYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDK 239
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 240 LQAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 419
+ E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 420 FEAGISKNGQTREH 461
E QT+EH
Sbjct: 146 ME-------QTKEH 152
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 56.8 bits (131), Expect = 7e-09
Identities = 38/113 (33%), Positives = 51/113 (45%)
Frame = +3
Query: 78 NIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQAERE 257
N ++ HVD GKST L+ CG + Q+ +LDKLQ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAV---------PPGQKQ---------MLDKLQVERE 85
Query: 258 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.4 bits (130), Expect = 9e-09
Identities = 39/113 (34%), Positives = 54/113 (47%)
Frame = +3
Query: 78 NIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQAERE 257
NI VI HVD+GK+T T L+Y G I+ A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 258 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 52.8 bits (121), Expect = 1e-07
Identities = 36/113 (31%), Positives = 52/113 (46%)
Frame = +3
Query: 78 NIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQAERE 257
NI + H+DSGK+T T ++Y G I ++ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRI----------DSMHEVRGKDDVGATMDFMDLERQ 95
Query: 258 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 42.3 bits (95), Expect = 2e-04
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Frame = +3
Query: 63 RKGHI-NIVVIGHVDSGKSTTTGHLIYECGGI--YKRTIEKF---EKEAQE----MGKGS 212
RK +I N+ VI HVD GKST T L+ + G I K +F K+ QE + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 213 FKYAWVLDKLQAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 380
+ L+K E +G T+++ K + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVT 134
Query: 381 DCAVLIVAAGTG 416
D A+++V +G
Sbjct: 135 DGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 41.9 bits (94), Expect = 2e-04
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Frame = +3
Query: 63 RKGHI-NIVVIGHVDSGKSTTTGHLIYECGGI--YKRTIEKF---EKEAQE----MGKGS 212
RK +I N+ VI HVD GKST T L+ + G I K +F K+ QE + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 213 FKYAWVLDKLQAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQA 380
+ L+K E +G T+++ K + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVT 134
Query: 381 DCAVLIVAAGTG 416
D A+++V +G
Sbjct: 135 DGALVVVDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.1 bits (82), Expect(2) = 3e-04
Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 201 GKGSFKYAWVLDKLQAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 377
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 378 ADCAVLIVAAGTG 416
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
Score = 23.4 bits (48), Expect(2) = 3e-04
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +3
Query: 27 ADCNP*LT---KNGQRKGHINIVVIGHVDSGKST 119
AD +P L K+ +R+ I + ++GHVD GK+T
Sbjct: 139 ADLHPQLEASPKDLERRPPI-VTIMGHVDHGKTT 171
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 36.7 bits (81), Expect = 0.008
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +3
Query: 72 HI-NIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQA 248
HI N+ ++ HVD GK++ L+ I R G +Y +D +
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSRED 63
Query: 249 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 401
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 36.7 bits (81), Expect = 0.008
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +3
Query: 72 HI-NIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQA 248
HI N+ ++ HVD GK++ L+ I R G +Y +D +
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSRED 63
Query: 249 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 401
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.033
Identities = 28/113 (24%), Positives = 48/113 (42%)
Frame = +3
Query: 78 NIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQAERE 257
N+ + GH+ GK+T +C + ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTT-----FLDC--LMEQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 258 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.7 bits (76), Expect = 0.033
Identities = 28/113 (24%), Positives = 48/113 (42%)
Frame = +3
Query: 78 NIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQAERE 257
N+ + GH+ GK+T +C + ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTT-----FLDC--LMEQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 258 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 31.9 bits (69), Expect = 0.23
Identities = 34/131 (25%), Positives = 57/131 (43%)
Frame = +3
Query: 69 GHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQA 248
G +N+ ++GHVDSGK+T T I E G + F+ A
Sbjct: 12 GPLNLGILGHVDSGKTTLT-RRIAELG-----STSAFDAHATSTTTDGI----------- 54
Query: 249 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 428
R + + + +G+ + +ID PGH I+ ++ ++ D A++I+ + A
Sbjct: 55 -RRNTLDLGFSTMTSLSGR-RLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVA 107
Query: 429 GISKNGQTREH 461
GI QT EH
Sbjct: 108 GIQP--QTAEH 116
>Z66500-3|CAA91310.1| 309|Caenorhabditis elegans Hypothetical
protein T05C12.3 protein.
Length = 309
Score = 31.1 bits (67), Expect = 0.40
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 33 CNP*LTKNGQRKGHINIVVIGHVDSGK--STTTGHLIYECGGIYKRTIEKFEKEAQEMGK 206
CN + ++G KG + +V G GK +TT HL I R +EK E+ A+E+ K
Sbjct: 13 CNSPILRDGALKGKVALVTGGGTGIGKAIATTFAHLGASV-AIAARRMEKLEQTAEEIMK 71
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.53
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 309 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 404
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 30.3 bits (65), Expect = 0.70
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 69 GHINIVVIGHVDSGKSTTT 125
G +N+ ++GHVDSGK+T T
Sbjct: 12 GPLNLGILGHVDSGKTTLT 30
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 332 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 243
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 318 IIDAPGHRDFIKNMITGTSQADCAVLIV 401
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AF125446-1|AAY86267.1| 198|Caenorhabditis elegans Hypothetical
protein R05C11.4 protein.
Length = 198
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 96 HVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEM 200
H + K T L+ E G+Y ++E FEKE Q+M
Sbjct: 48 HCCASKLPPTNTLLKEKHGVYCCSLEDFEKEKQDM 82
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 285 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 407
++ E G+ V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>U23182-3|AAK70642.1| 252|Caenorhabditis elegans Hypothetical
protein F40B5.3 protein.
Length = 252
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 87 RQCLCDLFFAHFWLVTDYNQR 25
RQ DLF+ H LV+DYNQ+
Sbjct: 68 RQKQADLFWNHITLVSDYNQK 88
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 225 WVLDKLQAERERGITIDIALWKFETGKYYVTII 323
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 401 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 270
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 401 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 270
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 225 WVLDKLQAERERGITIDIALWKFETGKYYVTII 323
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 225 WVLDKLQAERERGITIDIALWKFETGKYYVTII 323
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 401 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 270
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 401 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 270
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 27.1 bits (57), Expect = 6.5
Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 8/122 (6%)
Frame = +3
Query: 75 INIVVIGHVDSGKSTTTGHLIYEC--GGIYKRTIEKFEKEAQEMGKGSFKYAWVLDKLQA 248
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 249 ERERGITIDIALWKF----ETGKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 410
RG ++ A E VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAAD 285
Query: 411 TG 416
G
Sbjct: 286 RG 287
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 159 KRTIEKFEKEAQEMGKGSFKYAWVLDKLQAERE 257
KR ++ EKE + F Y LDK++ ER+
Sbjct: 273 KRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 159 KRTIEKFEKEAQEMGKGSFKYAWVLDKLQAERE 257
KR ++ EKE + F Y LDK++ ER+
Sbjct: 208 KRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 428 GFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAG 297
GF FT+ D KH + + S+ +LDE+ + DG + + G
Sbjct: 74 GFTFTNEYPDQKHINIERQNYSNALLDELGI-----DGKMAYIG 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,330,618
Number of Sequences: 27780
Number of extensions: 246736
Number of successful extensions: 885
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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