Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_J09
(461 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 272 9e-76
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 270 5e-75
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 166 9e-44
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 135 3e-34
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.001
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 26 0.23
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 25 0.40
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 25 0.52
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 2.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 2.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 3.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.5
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 8.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 272 bits (668), Expect = 9e-76
Identities = 128/135 (94%), Positives = 131/135 (97%)
Frame = +3
Query: 57 GQRKGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLD 236
G+ K HINIVVIGHVDSGKSTTTGHLIY+CGGI KRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 237 KLQAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
KL+AERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG
Sbjct: 62 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 121
Query: 417 EFEAGISKNGQTREH 461
EFEAGISKNGQTREH
Sbjct: 122 EFEAGISKNGQTREH 136
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 270 bits (662), Expect = 5e-75
Identities = 127/135 (94%), Positives = 130/135 (96%)
Frame = +3
Query: 57 GQRKGHINIVVIGHVDSGKSTTTGHLIYECGGIYKRTIEKFEKEAQEMGKGSFKYAWVLD 236
G+ K HINIVVIGHVDSGKSTTTGHLIY+CGGI KRTIEKFEKEAQEMGKGSFKYAWVLD
Sbjct: 2 GKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 61
Query: 237 KLQAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
KL+AERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG G
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIG 121
Query: 417 EFEAGISKNGQTREH 461
EFEAGISKNGQTREH
Sbjct: 122 EFEAGISKNGQTREH 136
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 166 bits (404), Expect = 9e-44
Identities = 77/79 (97%), Positives = 78/79 (98%)
Frame = +3
Query: 225 WVLDKLQAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 404
WVLDKL+AERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 405 AGTGEFEAGISKNGQTREH 461
AGTGEFEAGISKNGQTREH
Sbjct: 61 AGTGEFEAGISKNGQTREH 79
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 135 bits (326), Expect = 3e-34
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +3
Query: 273 DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 452
DIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 453 REH 461
REH
Sbjct: 61 REH 63
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.001
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 312 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 416
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.0 bits (52), Expect = 0.40
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 66 KGHINIVVIGHVDSGKST 119
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.8 bits (54), Expect = 0.23
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 63 RKGHINIVVIGHVDSGKST 119
R+ INI IGHV GKST
Sbjct: 39 RQATINIGTIGHVAHGKST 57
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 25.0 bits (52), Expect = 0.40
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 62 KKRSHKHCRHRTRRLRQVHNNW 127
KKR+ K RH++ R ++ NW
Sbjct: 13 KKRTKKFIRHQSDRYSKLKRNW 34
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 24.6 bits (51), Expect = 0.52
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -3
Query: 144 IRRSSD-QLLWTCRSRRVR*RQCLC 73
IR S D Q L CRSRR CLC
Sbjct: 334 IRESLDTQFLQVCRSRRHSDSCCLC 358
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 2.1
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Frame = +2
Query: 125 WSLDLRMRWYLQTYH------RKVREGSPGNG*GFLQIRL 226
WSL M W L T H K E +P +G G+L + L
Sbjct: 101 WSLVPHMAWQLSTAHLLAQLFLKSTEVTPRDGLGWLLLML 140
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.2 bits (45), Expect = 2.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 297 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 398
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 3.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 297 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 398
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 8.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 139 TNAVVSTNVPSKSSRRKPRKWVRVPSNTLGYWTN 240
TNA + S+S R+ ++ RVPS G T+
Sbjct: 1767 TNASAHSRSGSQSMPRQNGRYSRVPSQGGGSGTH 1800
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 20.6 bits (41), Expect = 8.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 230 YPSVFEGTLTHFLG 189
YPS+ +GT ++ LG
Sbjct: 25 YPSIRQGTTSYCLG 38
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,963
Number of Sequences: 438
Number of extensions: 3243
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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