Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_J07
(251 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D31887-1|BAA06685.1| 531|Homo sapiens KIAA0062 protein. 28 6.3
BC015770-1|AAH15770.1| 481|Homo sapiens SLC39A14 protein protein. 28 6.3
AK172810-1|BAD18780.1| 492|Homo sapiens protein ( Homo sapiens ... 28 6.3
Z11899-1|CAA77952.1| 265|Homo sapiens octamer binding protein 3... 27 8.3
Z11898-1|CAA77951.1| 360|Homo sapiens octamer binding protein 3... 27 8.3
BX088580-3|CAI18709.1| 360|Homo sapiens POU domain class 5 tran... 27 8.3
BX088580-2|CAI18708.1| 265|Homo sapiens POU domain class 5 tran... 27 8.3
BC117437-1|AAI17438.1| 360|Homo sapiens POU class 5 homeobox 1 ... 27 8.3
BC117435-1|AAI17436.1| 360|Homo sapiens POU class 5 homeobox 1 ... 27 8.3
BA000025-59|BAB63311.1| 265|Homo sapiens POU-type homeodomain-c... 27 8.3
AL773544-9|CAI18486.1| 360|Homo sapiens POU domain, class 5, tr... 27 8.3
AL773544-8|CAI18485.1| 265|Homo sapiens POU domain, class 5, tr... 27 8.3
AL662844-17|CAI18331.1| 360|Homo sapiens POU domain, class 5, t... 27 8.3
AL662833-12|CAI17408.1| 360|Homo sapiens POU domain, class 5, t... 27 8.3
AL662833-11|CAI17407.1| 265|Homo sapiens POU domain, class 5, t... 27 8.3
AF268618-1|AAG53085.1| 359|Homo sapiens POU 5 domain protein pr... 27 8.3
AF268613-1|AAG53082.1| 286|Homo sapiens POU 5 domain protein pr... 27 8.3
AB202105-2|BAE78630.1| 360|Homo sapiens POU domain, class 5, tr... 27 8.3
AB103619-2|BAF31281.1| 360|Homo sapiens OTF3 protein protein. 27 8.3
AB088113-2|BAC54946.1| 265|Homo sapiens POU domain, class 5, tr... 27 8.3
>D31887-1|BAA06685.1| 531|Homo sapiens KIAA0062 protein.
Length = 531
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 149 NPIQCLVLRGSA*VYKNFFSFYFYEKLLTVSL 244
NP++ + SA V+ F+ F+F EK+L + L
Sbjct: 253 NPLEDYYVSKSAVVFGGFYLFFFTEKILKILL 284
>BC015770-1|AAH15770.1| 481|Homo sapiens SLC39A14 protein protein.
Length = 481
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 149 NPIQCLVLRGSA*VYKNFFSFYFYEKLLTVSL 244
NP++ + SA V+ F+ F+F EK+L + L
Sbjct: 214 NPLEDYYVSKSAVVFGGFYLFFFTEKILKILL 245
>AK172810-1|BAD18780.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ23971 fis, clone HEP18208. ).
Length = 492
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 149 NPIQCLVLRGSA*VYKNFFSFYFYEKLLTVSL 244
NP++ + SA V+ F+ F+F EK+L + L
Sbjct: 214 NPLEDYYVSKSAVVFGGFYLFFFTEKILKILL 245
>Z11899-1|CAA77952.1| 265|Homo sapiens octamer binding protein 3B
protein.
Length = 265
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 84 FSQTTICRFEALQLSFKNMCKLRP 107
>Z11898-1|CAA77951.1| 360|Homo sapiens octamer binding protein 3A
protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 179 FSQTTICRFEALQLSFKNMCKLRP 202
>BX088580-3|CAI18709.1| 360|Homo sapiens POU domain class 5
transcription factor 1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 179 FSQTTICRFEALQLSFKNMCKLRP 202
>BX088580-2|CAI18708.1| 265|Homo sapiens POU domain class 5
transcription factor 1 protein.
Length = 265
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 84 FSQTTICRFEALQLSFKNMCKLRP 107
>BC117437-1|AAI17438.1| 360|Homo sapiens POU class 5 homeobox 1
protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 179 FSQTTICRFEALQLSFKNMCKLRP 202
>BC117435-1|AAI17436.1| 360|Homo sapiens POU class 5 homeobox 1
protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 179 FSQTTICRFEALQLSFKNMCKLRP 202
>BA000025-59|BAB63311.1| 265|Homo sapiens POU-type
homeodomain-containing DNA-binding protein protein.
Length = 265
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 84 FSQTTICRFEALQLSFKNMCKLRP 107
>AL773544-9|CAI18486.1| 360|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 179 FSQTTICRFEALQLSFKNMCKLRP 202
>AL773544-8|CAI18485.1| 265|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 265
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 84 FSQTTICRFEALQLSFKNMCKLRP 107
>AL662844-17|CAI18331.1| 360|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 179 FSQTTICRFEALQLSFKNMCKLRP 202
>AL662833-12|CAI17408.1| 360|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 179 FSQTTICRFEALQLSFKNMCKLRP 202
>AL662833-11|CAI17407.1| 265|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 265
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 84 FSQTTICRFEALQLSFKNMCKLRP 107
>AF268618-1|AAG53085.1| 359|Homo sapiens POU 5 domain protein
protein.
Length = 359
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 179 FSQTTICRFEALQLSFKNMCKLRP 202
>AF268613-1|AAG53082.1| 286|Homo sapiens POU 5 domain protein
protein.
Length = 286
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 172 FSQTTICRFEGLQLSFKNMCKLRP 195
>AB202105-2|BAE78630.1| 360|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 179 FSQTTICRFEALQLSFKNMCKLRP 202
>AB103619-2|BAF31281.1| 360|Homo sapiens OTF3 protein protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 179 FSQTTICRFEALQLSFKNMCKLRP 202
>AB088113-2|BAC54946.1| 265|Homo sapiens POU domain, class 5,
transcription factor 1 protein.
Length = 265
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 90 FYYCTLCYME*LQLSKKNPIKIRP 19
F T+C E LQLS KN K+RP
Sbjct: 84 FSQTTICRFEALQLSFKNMCKLRP 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,025,982
Number of Sequences: 237096
Number of extensions: 484094
Number of successful extensions: 632
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 76,859,062
effective HSP length: 61
effective length of database: 62,396,206
effective search space used: 1372716532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -