Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_J07
         (251 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    25   0.11 
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    22   1.0  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   2.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   2.4  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    20   4.2  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   5.5  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    19   7.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    19   7.3  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    19   7.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    19   7.3  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 25.4 bits (53), Expect = 0.11
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -3

Query: 183 ALPRKTKH*IGFYSI--FRSFNYHTRNPNYFPKFYYCTLCYME*LQLSKKNPI 31
           +L  KT H    Y+   + ++NY+  N N + K YY  + Y+E + +    PI
Sbjct: 84  SLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYY-NINYIEQIPVPVPVPI 135


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 1.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 144 SIFRSFNYHTRNPNYFPKFYYCTLCYME 61
           +I  + NY+  N N + K YY  + Y+E
Sbjct: 89  TIHNNNNYNNNNYNNYKKLYY-NINYIE 115


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 126 NYHTRNPNYFPKFYY 82
           NY+  N N + K YY
Sbjct: 340 NYNNNNYNNYKKLYY 354


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 105 NYFPKFYYCTLCY 67
           +Y  K Y CTLC+
Sbjct: 254 HYGEKVYKCTLCH 266


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 126 NYHTRNPNYFPKFYYCTLCYME*LQLSKKNPI 31
           NY+    NY  K YY  + Y+E + +    P+
Sbjct: 96  NYNNNYNNYNKKLYY-NINYIEQIPVPVPVPV 126


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 128 LIIIRGTLIIFQNFTIV 78
           ++I R  LIIF  FTI+
Sbjct: 524 MVIDRMCLIIFTLFTII 540


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 174 GEVLEFIRIFLVFIFMRNF*LYP 242
           G VL  IRI L      N  LYP
Sbjct: 146 GSVLYSIRISLTLSCPMNLKLYP 168


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 174 GEVLEFIRIFLVFIFMRNF*LYP 242
           G VL  IRI L      N  LYP
Sbjct: 146 GSVLYSIRISLTLSCPMNLKLYP 168


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 129 FNYHTRNPNYFPKFYYCTLCYME*LQLSKKNPI 31
           +NY+  N N   K  Y  + Y+E + +    PI
Sbjct: 98  YNYNNNNYNNNCKKLYYNINYIEQIPVPVPVPI 130


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 152 PIQCLVLRGSA*VYKNFFSFY 214
           P QCL       +Y +  SFY
Sbjct: 333 PDQCLFYNTDFIIYSSLSSFY 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,769
Number of Sequences: 438
Number of extensions: 1085
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4527252
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)