Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_J06
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 247 2e-66
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 247 2e-66
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 247 2e-66
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 247 2e-66
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 147 2e-36
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 147 2e-36
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 140 3e-34
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 134 2e-32
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 74 3e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 74 3e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 74 3e-14
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 73 8e-14
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 73 8e-14
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 54 3e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 54 4e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 54 5e-08
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 43 1e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 42 1e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 36 0.001
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.004
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 32 0.14
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 32 0.14
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 32 0.14
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 32 0.14
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.42
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.73
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.73
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 0.96
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 0.96
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 2.9
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 2.9
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 2.9
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 2.9
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 27 5.1
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 27 5.1
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 27 6.8
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 26 9.0
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 26 9.0
J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein ( C.ele... 26 9.0
AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kina... 26 9.0
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 247 bits (605), Expect = 2e-66
Identities = 114/117 (97%), Positives = 116/117 (99%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 401
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 247 bits (605), Expect = 2e-66
Identities = 114/117 (97%), Positives = 116/117 (99%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 401
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 247 bits (605), Expect = 2e-66
Identities = 114/117 (97%), Positives = 116/117 (99%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 401
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 247 bits (605), Expect = 2e-66
Identities = 114/117 (97%), Positives = 116/117 (99%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 401
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 147 bits (357), Expect = 2e-36
Identities = 66/115 (57%), Positives = 86/115 (74%)
Frame = +3
Query: 60 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 239
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 240 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNA 281
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 147 bits (357), Expect = 2e-36
Identities = 66/115 (57%), Positives = 86/115 (74%)
Frame = +3
Query: 60 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 239
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 240 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNA 299
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 140 bits (339), Expect = 3e-34
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 231 DKLKAER 251
DKLK +
Sbjct: 61 DKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 134 bits (325), Expect = 2e-32
Identities = 59/117 (50%), Positives = 85/117 (72%)
Frame = +3
Query: 54 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 233
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 234 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISA 220
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 74.1 bits (174), Expect = 3e-14
Identities = 43/116 (37%), Positives = 61/116 (52%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 145
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 74.1 bits (174), Expect = 3e-14
Identities = 43/116 (37%), Positives = 61/116 (52%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 146
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 74.1 bits (174), Expect = 3e-14
Identities = 43/116 (37%), Positives = 61/116 (52%)
Frame = +3
Query: 57 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAA 146
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 72.9 bits (171), Expect = 8e-14
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +3
Query: 63 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAA 141
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 72.9 bits (171), Expect = 8e-14
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = +3
Query: 63 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 236
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 237 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAA 141
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 54.4 bits (125), Expect = 3e-08
Identities = 36/90 (40%), Positives = 46/90 (51%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDF 344
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 54.0 bits (124), Expect = 4e-08
Identities = 36/110 (32%), Positives = 51/110 (46%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
RGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 53.6 bits (123), Expect = 5e-08
Identities = 36/108 (33%), Positives = 51/108 (47%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
RGITI A + + IID PGH DF + D AVL++
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL 143
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 42.7 bits (96), Expect = 1e-04
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 227
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 228 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 395
L+K E +G T+++ K + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVV 140
Query: 396 V 398
V
Sbjct: 141 V 141
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 42.3 bits (95), Expect = 1e-04
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 13/121 (10%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 227
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 228 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 395
L+K E +G T+++ K + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVV 140
Query: 396 V 398
V
Sbjct: 141 V 141
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 35.5 bits (78), Expect(2) = 0.001
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 198 GKGSFKYAWVLDKLKAERERGITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQ 374
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 375 ADCAVLIVAA 404
AD VL+VAA
Sbjct: 228 ADIVVLVVAA 237
Score = 23.0 bits (47), Expect(2) = 0.001
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +3
Query: 78 IVVIGHVDSGKST 116
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.004
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 57 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 233
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 234 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 37.5 bits (83), Expect = 0.004
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 57 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 233
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 234 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 398
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.3 bits (70), Expect = 0.14
Identities = 27/110 (24%), Positives = 46/110 (41%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
+ + I + Y + IID PGH +F M AD V++V A
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDA 234
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.3 bits (70), Expect = 0.14
Identities = 27/110 (24%), Positives = 46/110 (41%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 255 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 404
+ + I + Y + IID PGH +F M AD V++V A
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDA 109
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.14
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 30 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 137
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 32.3 bits (70), Expect = 0.14
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 30 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 137
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.42
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 306 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 401
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.73
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 329 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 240
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.73
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 315 IIDAPGHRDFIKNMITGTSQADCAVLIV 398
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 0.96
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 153 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.96
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 153 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 29.1 bits (62), Expect = 1.3
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Frame = +3
Query: 27 IVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMG 200
+++R P+ ++ + + + V+G D GKST G L C G K I F + E+
Sbjct: 155 VLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVR 212
Query: 201 KGSFKYAWVLDKLKAERERGITIDIALWKF----ETGKYYVTIIDAPGHRDFIKNMITGT 368
G K + V + + RG ++ A E VT+ID G + K I G
Sbjct: 213 TG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGL 270
Query: 369 S--QADCAVLIVAA 404
+ A L+VAA
Sbjct: 271 TGYTPHFACLVVAA 284
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTT 122
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 72 INIVVIGHVDSGKSTTT 122
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 1.7
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 282 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 404
++ E G+ V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 222 WVLDKLKAERERGITIDIALWKFETGKYYVTII 320
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 222 WVLDKLKAERERGITIDIALWKFETGKYYVTII 320
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 222 WVLDKLKAERERGITIDIALWKFETGKYYVTII 320
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1396
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 398 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESNID 267
D++H AV + +S+H +++ S S + DIV E +S+ D
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSSDD 1369
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 203
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 203
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 45 PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG--IDKRTIEKFEKEAQEMGK 203
PK +EK+ I + +V+ G TTG +CGG ++ R + + AQE K
Sbjct: 1299 PKGFEEKLEKVITTLSNVEMGLDDTTGIDGSECGGALMEVRALVRMLDGAQEKWK 1353
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 26.6 bits (56), Expect = 6.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 33 IRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY-KCGGIDKRTIEKFEKEAQEMGK 203
IR+ K+GK K+ + ++ D GKS +L + G D +F+ ++GK
Sbjct: 11 IREAWKLGKNKIFLRACILYEYDQGKSVYESYLSFCDAVGDDFMEYREFDFWYYKLGK 68
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +3
Query: 75 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 254
+I+ GH+D S GH +K GI E FE E ++ + + + ERE
Sbjct: 1633 SIIPSGHIDQPISLPRGHTGFKPAGIVNED-ELFETERKQREESPTRESGYATSTSYERE 1691
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 103 PASPQQLVT*STNAVVSTNVPSKSS 177
P+SPQQL NA STNV + S
Sbjct: 120 PSSPQQLHLAFANATTSTNVTNAKS 144
>J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein (
C.elegans casein kinaseII-alpha gene, complete cds. ).
Length = 360
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 361
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
>AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kinase
protein 3 protein.
Length = 360
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 260 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 361
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,430,192
Number of Sequences: 27780
Number of extensions: 189341
Number of successful extensions: 651
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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