Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_J04
         (485 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81035-2|CAB02736.1|  379|Caenorhabditis elegans Hypothetical pr...    28   3.1  
U41013-4|AAA82303.2|  329|Caenorhabditis elegans Serpentine rece...    27   5.5  
AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or cys...    27   5.5  
AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin prote...    27   5.5  
Z99286-1|CAH60792.1|  311|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AF067609-5|AAC17534.1|  644|Caenorhabditis elegans Hypothetical ...    27   7.2  

>Z81035-2|CAB02736.1|  379|Caenorhabditis elegans Hypothetical
           protein C15H11.2 protein.
          Length = 379

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 8/21 (38%), Positives = 17/21 (80%)
 Frame = -3

Query: 87  LLVLQHMLSWRPFHLMRFWLV 25
           LL+L + ++W P++L+ +W+V
Sbjct: 298 LLILTYAVTWLPYNLLSWWMV 318


>U41013-4|AAA82303.2|  329|Caenorhabditis elegans Serpentine
           receptor, class t protein73 protein.
          Length = 329

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 476 FYLILTSCFFSI*-TINELEKLSSIRVGIDVSLINTLFVFVHFSFPFNSSNYK 321
           F++IL      +  T  +L+KLS+ ++   +S  +T+ +F+H +  F   N K
Sbjct: 49  FFIILQFLVMRVMITDKDLKKLSAFQIMFMISFFDTIQLFIHLTAVFYILNSK 101


>AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 422 EKLSSIRVGIDVSLINTLFV-FVHFSFPFNSSNYKIKEKCITAKEGPN*LLTKIAQL 255
           E L S+      +LIN ++  ++  +FP    +YKI  K   AK G   L T+ A L
Sbjct: 239 ENLKSLNAAKFHNLINNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADL 295


>AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin protein
           1 protein.
          Length = 366

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 422 EKLSSIRVGIDVSLINTLFV-FVHFSFPFNSSNYKIKEKCITAKEGPN*LLTKIAQL 255
           E L S+      +LIN ++  ++  +FP    +YKI  K   AK G   L T+ A L
Sbjct: 239 ENLKSLNAAKFHNLINNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADL 295


>Z99286-1|CAH60792.1|  311|Caenorhabditis elegans Hypothetical
           protein Y7A9C.7 protein.
          Length = 311

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 195 FIEINHFVYLKVSYKFVQLNQLCYFC 272
           F  +NHF  +  +  F+ L+ +C+FC
Sbjct: 59  FPAVNHFYQMTRNTYFIYLSFICFFC 84


>AF067609-5|AAC17534.1|  644|Caenorhabditis elegans Hypothetical
           protein C23H5.7 protein.
          Length = 644

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 201 EINHFVYLKVSYKFVQLNQLCYFCK*SVWSFFSSYALFFN 320
           +I H  + ++ Y +V  N   Y+    +WSFF S+ + +N
Sbjct: 27  DILHDSFHRLLYFYVPFNSKYYY----IWSFFVSFGVMYN 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,043,135
Number of Sequences: 27780
Number of extensions: 149286
Number of successful extensions: 305
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)