Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_J01
(474 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 210 3e-55
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 207 4e-54
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 200 3e-52
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 199 7e-52
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 198 1e-51
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 198 1e-51
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 138 2e-33
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 138 2e-33
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 106 9e-24
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 102 1e-22
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 102 1e-22
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 101 2e-22
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 100 5e-22
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 100 5e-22
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 100 5e-22
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 100 5e-22
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 98 3e-21
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 97 6e-21
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 97 6e-21
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 96 1e-20
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 96 1e-20
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 96 1e-20
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 96 1e-20
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 93 7e-20
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 71 3e-13
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 71 3e-13
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 2.3
Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 27 6.9
AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical... 27 6.9
AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical... 27 6.9
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 6.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 210 bits (514), Expect = 3e-55
Identities = 94/101 (93%), Positives = 99/101 (98%)
Frame = +2
Query: 113 GAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFG 292
GAY+GDSDLQLERINVYYNEASGGKYVPRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFG
Sbjct: 34 GAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFG 93
Query: 293 QSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGFQ 415
QSGAGNNWAKGHYTEGAELVD+VLDVVR EAESCDC+QGFQ
Sbjct: 94 QSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQ 134
Score = 35.9 bits (79), Expect = 0.015
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1
Query: 25 EIVHIQPAQCGNQIGAK 75
EIVHIQ QCGNQIGAK
Sbjct: 3 EIVHIQAGQCGNQIGAK 19
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 207 bits (505), Expect = 4e-54
Identities = 93/107 (86%), Positives = 99/107 (92%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 HG-STHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 274
HG G Y G+SDLQLERINVYYNEA+GGKYVPRA+LVDLEPGTMDSVRSGPFGQ+FRP
Sbjct: 28 HGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 275 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGFQ 415
DNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVR EAE CDC+QGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQ 134
Score = 35.5 bits (78), Expect = 0.020
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 25 EIVHIQPAQCGNQIGAK 75
EIVH+Q QCGNQIGAK
Sbjct: 3 EIVHVQAGQCGNQIGAK 19
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 200 bits (489), Expect = 3e-52
Identities = 89/107 (83%), Positives = 98/107 (91%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 HG-STHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 274
HG G + G+SDLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMDSVRSGPFGQ+FRP
Sbjct: 28 HGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 275 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGFQ 415
DNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+R EAE CDC+QGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQ 134
Score = 34.3 bits (75), Expect = 0.045
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 25 EIVHIQPAQCGNQIGAK 75
EIVH+Q QCGNQIG+K
Sbjct: 3 EIVHVQAGQCGNQIGSK 19
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 199 bits (486), Expect = 7e-52
Identities = 88/107 (82%), Positives = 98/107 (91%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 HG-STHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 274
HG G + G++DLQLERI+VYYNEA+ GKYVPRA+LVDLEPGTMDSVRSGPFGQ+FRP
Sbjct: 28 HGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 275 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGFQ 415
DNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+R EAE CDC+QGFQ
Sbjct: 88 DNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQ 134
Score = 34.3 bits (75), Expect = 0.045
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 25 EIVHIQPAQCGNQIGAK 75
EIVH+Q QCGNQIG+K
Sbjct: 3 EIVHVQAGQCGNQIGSK 19
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 198 bits (484), Expect = 1e-51
Identities = 91/107 (85%), Positives = 96/107 (89%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 HG-STHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 274
HG G Y GDSDLQLERINVYYNEA KYVPRA+LVDLEPGTMDSVRSGPFGQ+FRP
Sbjct: 28 HGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 275 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGFQ 415
DN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVR EAES DC+QGFQ
Sbjct: 88 DNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQ 134
Score = 34.7 bits (76), Expect = 0.034
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 25 EIVHIQPAQCGNQIGAK 75
EIVHIQ QCGNQIG+K
Sbjct: 3 EIVHIQAGQCGNQIGSK 19
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 198 bits (484), Expect = 1e-51
Identities = 91/107 (85%), Positives = 96/107 (89%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 HG-STHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 274
HG G Y GDSDLQLERINVYYNEA KYVPRA+LVDLEPGTMDSVRSGPFGQ+FRP
Sbjct: 28 HGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Query: 275 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGFQ 415
DN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVR EAES DC+QGFQ
Sbjct: 88 DNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQ 134
Score = 34.7 bits (76), Expect = 0.034
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1
Query: 25 EIVHIQPAQCGNQIGAK 75
EIVHIQ QCGNQIG+K
Sbjct: 3 EIVHIQAGQCGNQIGSK 19
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 138 bits (333), Expect = 2e-33
Identities = 62/107 (57%), Positives = 81/107 (75%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 HG-STHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 274
HG T G Y GD+ QLERI YY E G KYVPRAILVDL+P +++ VRS +G++F P
Sbjct: 28 HGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDP 87
Query: 275 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGFQ 415
+N V G+SGAGNNW++G+Y +GAE+VD VL V+R EAE+ D ++GFQ
Sbjct: 88 ENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQ 134
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 22 EEIVHIQPAQCGNQIGAK 75
+EI+++Q QCGNQIGAK
Sbjct: 2 KEIINVQVGQCGNQIGAK 19
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 138 bits (333), Expect = 2e-33
Identities = 62/107 (57%), Positives = 81/107 (75%), Gaps = 1/107 (0%)
Frame = +2
Query: 98 HG-STHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 274
HG T G Y GD+ QLERI YY E G KYVPRAILVDL+P +++ VRS +G++F P
Sbjct: 28 HGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDP 87
Query: 275 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGFQ 415
+N V G+SGAGNNW++G+Y +GAE+VD VL V+R EAE+ D ++GFQ
Sbjct: 88 ENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQ 134
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 22 EEIVHIQPAQCGNQIGAK 75
+EI+++Q QCGNQIGAK
Sbjct: 2 KEIINVQVGQCGNQIGAK 19
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 106 bits (254), Expect = 9e-24
Identities = 42/89 (47%), Positives = 64/89 (71%)
Frame = +2
Query: 146 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 325
+ + +++E+ GK+VPRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+G
Sbjct: 50 QSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARG 109
Query: 326 HYTEGAELVDSVLDVVRNEAESCDCIQGF 412
HYT G EL+D VLD +R + E+C+ +QGF
Sbjct: 110 HYTIGKELIDVVLDRIRKQTENCEGLQGF 138
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 102 bits (245), Expect = 1e-22
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 HG-STHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 274
HG G D E ++++ G+YVPR+I VDLEP +D +R+G + ++F P
Sbjct: 28 HGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHP 87
Query: 275 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGF 412
+ + G+ A NN+A+GHYT G EL+D+VLD +R A++C +QGF
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 102 bits (245), Expect = 1e-22
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 HG-STHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRP 274
HG G D E ++++ G+YVPR+I VDLEP +D +R+G + ++F P
Sbjct: 28 HGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHP 87
Query: 275 DNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGF 412
+ + G+ A NN+A+GHYT G EL+D+VLD +R A++C +QGF
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 101 bits (243), Expect = 2e-22
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 HGST-HGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIF 268
HG T G D+ +E N +++E GK+VPRAI VDLEP +D VR+G + ++F
Sbjct: 28 HGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLF 87
Query: 269 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGF 412
P+ + G+ A NN+A+GHYT G EL+D V+D VR E C +QGF
Sbjct: 88 HPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGF 135
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 100 bits (240), Expect = 5e-22
Identities = 39/89 (43%), Positives = 62/89 (69%)
Frame = +2
Query: 146 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 325
E ++++ G+YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+G
Sbjct: 45 ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 326 HYTEGAELVDSVLDVVRNEAESCDCIQGF 412
HYT G EL+D+VLD +R A++C +QGF
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 100 bits (240), Expect = 5e-22
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 HGSTHGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIF 268
HG YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G + +F
Sbjct: 34 HGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLF 93
Query: 269 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGF 412
P+ + G+ A N +A+G YT G E++D V+D V+ AE+C+ +QGF
Sbjct: 94 HPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 141
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 100 bits (240), Expect = 5e-22
Identities = 39/89 (43%), Positives = 62/89 (69%)
Frame = +2
Query: 146 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 325
E ++++ G+YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+G
Sbjct: 45 ESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 326 HYTEGAELVDSVLDVVRNEAESCDCIQGF 412
HYT G EL+D+VLD +R A++C +QGF
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 100 bits (240), Expect = 5e-22
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 HGSTHGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIF 268
HG YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G + +F
Sbjct: 6 HGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLF 65
Query: 269 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQGF 412
P+ + G+ A N +A+G YT G E++D V+D V+ AE+C+ +QGF
Sbjct: 66 HPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 97.9 bits (233), Expect = 3e-21
Identities = 40/89 (44%), Positives = 61/89 (68%)
Frame = +2
Query: 146 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 325
+ N +++E GK+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+G
Sbjct: 52 DSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARG 111
Query: 326 HYTEGAELVDSVLDVVRNEAESCDCIQGF 412
HYT G E++D V+D VR E+C +QGF
Sbjct: 112 HYTIGKEIIDVVMDRVRRLVENCRGLQGF 140
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 97.1 bits (231), Expect = 6e-21
Identities = 37/84 (44%), Positives = 60/84 (71%)
Frame = +2
Query: 161 YYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 340
++++ G+YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 341 AELVDSVLDVVRNEAESCDCIQGF 412
EL+D+ LD +R A++C +QGF
Sbjct: 110 KELIDTTLDRIRRLADNCSGLQGF 133
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 97.1 bits (231), Expect = 6e-21
Identities = 37/84 (44%), Positives = 60/84 (71%)
Frame = +2
Query: 161 YYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 340
++++ G+YVPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 341 AELVDSVLDVVRNEAESCDCIQGF 412
EL+D+ LD +R A++C +QGF
Sbjct: 110 KELIDTTLDRIRRLADNCSGLQGF 133
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 95.9 bits (228), Expect = 1e-20
Identities = 36/89 (40%), Positives = 61/89 (68%)
Frame = +2
Query: 146 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 325
+ + +++E G++VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 326 HYTEGAELVDSVLDVVRNEAESCDCIQGF 412
HYT G E++D LD +R A++C +QGF
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGF 135
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 95.9 bits (228), Expect = 1e-20
Identities = 36/89 (40%), Positives = 61/89 (68%)
Frame = +2
Query: 146 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 325
+ + +++E G++VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+G
Sbjct: 46 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 105
Query: 326 HYTEGAELVDSVLDVVRNEAESCDCIQGF 412
HYT G E++D LD +R A++C +QGF
Sbjct: 106 HYTIGKEIIDLTLDRIRRLADNCTGLQGF 134
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 95.9 bits (228), Expect = 1e-20
Identities = 36/89 (40%), Positives = 61/89 (68%)
Frame = +2
Query: 146 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 325
+ + +++E G++VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 326 HYTEGAELVDSVLDVVRNEAESCDCIQGF 412
HYT G E++D LD +R A++C +QGF
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGF 135
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 95.9 bits (228), Expect = 1e-20
Identities = 36/89 (40%), Positives = 61/89 (68%)
Frame = +2
Query: 146 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 325
+ + +++E G++VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 326 HYTEGAELVDSVLDVVRNEAESCDCIQGF 412
HYT G E++D LD +R A++C +QGF
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGF 135
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 93.5 bits (222), Expect = 7e-20
Identities = 35/87 (40%), Positives = 61/87 (70%)
Frame = +2
Query: 152 INVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 331
+ ++++ G++VPR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHY
Sbjct: 46 LGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHY 105
Query: 332 TEGAELVDSVLDVVRNEAESCDCIQGF 412
T G E++D+ LD +R A +C+ +QGF
Sbjct: 106 TVGKEIIDTTLDRIRRLANNCEGLQGF 132
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 71.3 bits (167), Expect = 3e-13
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Frame = +2
Query: 98 HGSTHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGP-FGQIFRP 274
HG D ++ ++ + +A YVPRA+LVDLEP ++ + P F +F
Sbjct: 31 HGINERGQTTHEDDMNDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNT 90
Query: 275 DNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQG 409
DN GAGNNWA G Y +G E+ + ++D++ EAE+ + + G
Sbjct: 91 DNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDG 136
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 71.3 bits (167), Expect = 3e-13
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Frame = +2
Query: 98 HGSTHGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGP-FGQIFRP 274
HG D ++ ++ + +A YVPRA+LVDLEP ++ + P F +F
Sbjct: 31 HGINERGQTTHEDDMNDKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNT 90
Query: 275 DNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRNEAESCDCIQG 409
DN GAGNNWA G Y +G E+ + ++D++ EAE+ + + G
Sbjct: 91 DNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDG 136
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 2.3
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -1
Query: 396 SHDSASLRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTES 232
S A R + + S SS+PS CP LL PAP P + G PK +
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVP 353
Query: 231 MVPGSRST 208
PG+ T
Sbjct: 354 EPPGNMKT 361
>Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical
protein Y57G11C.51 protein.
Length = 160
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 249 DPSDRSSAPTTSFSDSPAPVTTGLRDTTRK 338
DPS SS+ ++S S SP+ +T L T R+
Sbjct: 123 DPSTPSSSTSSSTSSSPSSSSTPLTSTQRR 152
>AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical
protein Y48C3A.18b protein.
Length = 171
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -3
Query: 70 LQSGFRIVRAGCA 32
++SGFRIVR+GCA
Sbjct: 114 VESGFRIVRSGCA 126
>AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical
protein Y48C3A.18a protein.
Length = 244
Score = 27.1 bits (57), Expect = 6.9
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -3
Query: 70 LQSGFRIVRAGCA 32
++SGFRIVR+GCA
Sbjct: 187 VESGFRIVRSGCA 199
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = -1
Query: 411 NPCIQSHDSASLRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTES 232
NP + S+S +T + T++T +PS ++Q P T ++ + + + + +
Sbjct: 390 NPTTTAQLSSSSKTLTSTQTTQGSPST---VSQTTPGVSSASTGMTTSQASLRSTQNSVT 446
Query: 231 MVPGS 217
PGS
Sbjct: 447 STPGS 451
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,246,752
Number of Sequences: 27780
Number of extensions: 194433
Number of successful extensions: 789
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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