Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_I24
         (354 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC128160-1|AAI28161.1|  100|Homo sapiens glutathione peroxidase ...    29   3.1  
BC128159-1|AAI28160.1|  100|Homo sapiens glutathione peroxidase ...    29   3.1  
AY882013-1|AAW56939.1|  221|Homo sapiens glutathione peroxidase ...    29   3.1  
AL049543-2|CAB71121.1|  221|Homo sapiens dJ1186N24.2 (glutathion...    29   3.1  
AJ005277-1|CAA06463.1|  221|Homo sapiens glutathione peroxidase ...    29   3.1  

>BC128160-1|AAI28161.1|  100|Homo sapiens glutathione peroxidase 5
           (epididymal androgen-related protein) protein.
          Length = 100

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 204 DCKGDRKKLLVDYFHANLNTQNFYAFRFFIREVLNFINV 320
           DC  D K  + DY    LN   + +F+ ++ + + F+NV
Sbjct: 31  DCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNV 69


>BC128159-1|AAI28160.1|  100|Homo sapiens glutathione peroxidase 5
           (epididymal androgen-related protein) protein.
          Length = 100

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 204 DCKGDRKKLLVDYFHANLNTQNFYAFRFFIREVLNFINV 320
           DC  D K  + DY    LN   + +F+ ++ + + F+NV
Sbjct: 31  DCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNV 69


>AY882013-1|AAW56939.1|  221|Homo sapiens glutathione peroxidase 5
           (epididymal androgen-related protein) protein.
          Length = 221

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 204 DCKGDRKKLLVDYFHANLNTQNFYAFRFFIREVLNFINV 320
           DC  D K  + DY    LN   + +F+ ++ + + F+NV
Sbjct: 31  DCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNV 69


>AL049543-2|CAB71121.1|  221|Homo sapiens dJ1186N24.2 (glutathione
           peroxidase 5 (epididymalsubunit protein.
          Length = 221

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 204 DCKGDRKKLLVDYFHANLNTQNFYAFRFFIREVLNFINV 320
           DC  D K  + DY    LN   + +F+ ++ + + F+NV
Sbjct: 31  DCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNV 69


>AJ005277-1|CAA06463.1|  221|Homo sapiens glutathione peroxidase
           type 5 (GPX5) protein.
          Length = 221

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 204 DCKGDRKKLLVDYFHANLNTQNFYAFRFFIREVLNFINV 320
           DC  D K  + DY    LN   + +F+ ++ + + F+NV
Sbjct: 31  DCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNV 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,004,125
Number of Sequences: 237096
Number of extensions: 922347
Number of successful extensions: 1819
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1819
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)