Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I22
(489 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 151 3e-37
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 149 1e-36
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 140 5e-34
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 129 1e-30
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 128 2e-30
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 127 4e-30
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 126 7e-30
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 77 8e-15
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 59 2e-09
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 58 3e-09
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 58 4e-09
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 56 2e-08
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 54 8e-08
10_08_0620 - 19321612-19323237 50 1e-06
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 48 4e-06
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 45 4e-05
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 44 5e-05
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 40 0.001
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340... 29 1.5
03_05_0205 - 21965782-21965979,21969169-21969417 29 1.5
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 28 3.5
10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-38... 28 3.5
12_02_0555 - 20410659-20410898 28 4.6
08_02_0866 + 22006822-22006899,22006997-22007080,22007621-220077... 28 4.6
07_01_0956 + 8029297-8030285,8033204-8033330,8033350-8033640 27 6.1
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 27 8.1
11_06_0291 + 22008412-22012284 27 8.1
04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871 27 8.1
03_05_0527 + 25220375-25221425,25221513-25222182,25222347-252224... 27 8.1
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 151 bits (366), Expect = 3e-37
Identities = 68/117 (58%), Positives = 93/117 (79%)
Frame = +3
Query: 138 FYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGV 317
+ AKD++FG + RALML+GV+ LADAV VTMGPKGR V++EQS+G+PK+TKDGVTVAK +
Sbjct: 70 YAAKDIKFGVEARALMLRGVEELADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSI 129
Query: 318 ELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEIR 488
E ++ +N+GA LV+ VAN TN+ AGDGTT ATVL +AI EG + ++ G +++R
Sbjct: 130 EFSNRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFAEGCKSVAAGMNAMDLR 186
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 149 bits (361), Expect = 1e-36
Identities = 75/130 (57%), Positives = 98/130 (75%), Gaps = 10/130 (7%)
Frame = +3
Query: 129 LARFYA-KDVRFGADVRALMLQGVDILADAVAVTMGPK---------GRNVILEQSWGSP 278
L+R YA KD++FG + RALML+GV+ LADAV VTMGPK GRNV++EQS+GSP
Sbjct: 28 LSRNYAAKDIKFGVEARALMLRGVEELADAVKVTMGPKIGLNVSIMQGRNVVIEQSYGSP 87
Query: 279 KITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKI 458
K+TKDGVTVAK +E KD+ +N+GA LV+ VAN TN+ AGDGTT ATVL +AI EG + +
Sbjct: 88 KVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFTEGCKSV 147
Query: 459 SKGAKPIEIR 488
+ G +++R
Sbjct: 148 AAGMNAMDLR 157
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 140 bits (339), Expect = 5e-34
Identities = 70/120 (58%), Positives = 90/120 (75%), Gaps = 1/120 (0%)
Frame = +3
Query: 132 ARFYA-KDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVA 308
AR YA K+V FG RA +LQGV+ LADAV VTMGPKGRNVI+E+S +PK+TKDGVTVA
Sbjct: 114 ARGYAAKEVAFGVGARAALLQGVNDLADAVKVTMGPKGRNVIIERSHRAPKVTKDGVTVA 173
Query: 309 KGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEIR 488
K +E +D +N+GA LV+ VA TN+ AGDGTT ATVL +AI EG + ++ G +++R
Sbjct: 174 KSIEFEDSAKNVGANLVKQVAEATNKVAGDGTTCATVLTQAILTEGCKAVAAGVNVMDLR 233
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 129 bits (312), Expect = 1e-30
Identities = 62/132 (46%), Positives = 90/132 (68%)
Frame = +3
Query: 93 VRQSVTLHKTHQLARFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWG 272
VR++ + R AKD+ F RA + GV+ LA+AV VT+GP+GRNV+L++ +G
Sbjct: 22 VRRAKNGRAQRLVVRADAKDIAFDQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDE-YG 80
Query: 273 SPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFE 452
SPK+ DGVT+A+ +EL D +N GA L++ VA+ TN+ AGDGTTTA+VLAR I K G
Sbjct: 81 SPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLL 140
Query: 453 KISKGAKPIEIR 488
++ GA P+ ++
Sbjct: 141 SVTSGANPVSLK 152
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 128 bits (310), Expect = 2e-30
Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 2/116 (1%)
Frame = +3
Query: 144 AKDVRFGADVRAL--MLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGV 317
AK++ F D A+ + GV+ LAD V VT+GPKGRNV+LE +GSPKI DGVTVAK V
Sbjct: 53 AKELYFNKDGLAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEV 112
Query: 318 ELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
EL+D +NIGAKLV+ A TN+ AGDGTTT+ VLA+ + EG + ++ GA P++I
Sbjct: 113 ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQI 168
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 127 bits (307), Expect = 4e-30
Identities = 60/120 (50%), Positives = 86/120 (71%)
Frame = +3
Query: 129 LARFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVA 308
+ R AK++ F R+ + GV+ LA AVAVT+GP+GRNV+L++ +GSPK+ DGVT+A
Sbjct: 39 VVRASAKEIAFDQGSRSSLQAGVEKLAAAVAVTLGPRGRNVVLDE-FGSPKVVNDGVTIA 97
Query: 309 KGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEIR 488
+ +EL D +N GA L++ VA+ TN+ AGDGTTTA+VLAR I K G ++ GA P+ I+
Sbjct: 98 RAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIK 157
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 126 bits (305), Expect = 7e-30
Identities = 64/116 (55%), Positives = 85/116 (73%), Gaps = 2/116 (1%)
Frame = +3
Query: 144 AKDVRFGADVRALM-LQ-GVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGV 317
AK++ F D A+ LQ GV+ LAD V VT+GPKGRNV+LE +GSP+I DGVTVA+ V
Sbjct: 57 AKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREV 116
Query: 318 ELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
EL+D +NIGAKLV+ A TN+ AGDGTTT+ VLA+ + EG + ++ GA P++I
Sbjct: 117 ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQI 172
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 77.0 bits (181), Expect = 8e-15
Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Frame = +3
Query: 228 MGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN----VANNTNEEAG 395
+ GRNV+++Q PK+ DG+T+AK +EL + ++ GA L+Q +A+ TN G
Sbjct: 590 LSTSGRNVVIDQD-DVPKVINDGITIAKAIELPNAVEHAGAMLLQEHVNQIASKTNSSVG 648
Query: 396 DGTTTATVLARAIAKEGFEKISKGAKPIEIR 488
DGTTTA +LAR I G ++ GA P+ +R
Sbjct: 649 DGTTTAIILAREIINLGLLAVATGANPVALR 679
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 58.8 bits (136), Expect = 2e-09
Identities = 33/109 (30%), Positives = 55/109 (50%)
Frame = +3
Query: 150 DVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKD 329
D + DVR L + +ADAV ++GP+G + ++ IT DG T+ + L
Sbjct: 20 DTKRRDDVRGLNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQ 79
Query: 330 KFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKP 476
A+++ ++ + + AGDGTTT VLA ++ + +S GA P
Sbjct: 80 P----AARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHP 124
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 58.4 bits (135), Expect = 3e-09
Identities = 29/92 (31%), Positives = 49/92 (53%)
Frame = +3
Query: 201 ILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNT 380
++AD V T+GP+G + ++ G I+ DG T+ + +++ AK++ ++A +
Sbjct: 34 VVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMRLLDIIHP----AAKILVDIAKSQ 89
Query: 381 NEEAGDGTTTATVLARAIAKEGFEKISKGAKP 476
+ E GDGTTT +LA KE I G P
Sbjct: 90 DSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHP 121
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 58.0 bits (134), Expect = 4e-09
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Frame = +3
Query: 162 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWG---SPKITKDGVTVAKGVELKDK 332
G R G +AD V T+GPKG + IL QS G S +T DG T+ K + +
Sbjct: 14 GERARMAAFIGAMAIADLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLHI--- 69
Query: 333 FQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
N AK++ +++ ++E GDGTT+ VLA + +E + ++ P+ I
Sbjct: 70 -DNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTI 119
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Frame = +3
Query: 162 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWG---SPKITKDGVTVAKGVELKDK 332
G R G ++D V T+GPKG + IL QS G S +T DG T+ K + +
Sbjct: 15 GERARMASFVGGMAISDLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLHI--- 70
Query: 333 FQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
N AK++ +++ ++E GDGTT+ VLA + +E + ++ P+ I
Sbjct: 71 -DNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTI 120
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 53.6 bits (123), Expect = 8e-08
Identities = 29/108 (26%), Positives = 58/108 (53%)
Frame = +3
Query: 162 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 341
G D + + +A + ++GPKG + +L+ G IT DG T+ + +++ ++
Sbjct: 26 GLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI-- 83
Query: 342 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
AKL+ ++ + + E GDGTT V+A ++ ++ + + +G PI I
Sbjct: 84 --AKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRI 129
>10_08_0620 - 19321612-19323237
Length = 541
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Frame = +3
Query: 150 DVRFGADVRALMLQGVDILADAVAVTMGPKGRN-VILEQSWGSPK---ITKDGVTVAKGV 317
D + DVR L + +A A ++GP+G + +I S G + IT DG T+ +
Sbjct: 20 DTKRRDDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRM 79
Query: 318 ELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKP 476
L A+++ +++ + + AGDGTTT VLA ++ + +S GA P
Sbjct: 80 PLLQP----AARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHP 128
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 48.0 bits (109), Expect = 4e-06
Identities = 28/91 (30%), Positives = 46/91 (50%)
Frame = +3
Query: 204 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 383
L D + +GPKG +L G K+TKDG T+ K +++ QN A ++ A +
Sbjct: 29 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQI----QNPTAIMIARTAVAQD 84
Query: 384 EEAGDGTTTATVLARAIAKEGFEKISKGAKP 476
+ +GDGTT+ + + K+ I +G P
Sbjct: 85 DTSGDGTTSTVLFIGELMKQSERCIDEGTHP 115
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/88 (28%), Positives = 44/88 (50%)
Frame = +3
Query: 162 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 341
G V +Q +AD + T+GP+ +L + G +T DG + + +++ +
Sbjct: 19 GTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDI----AH 74
Query: 342 IGAKLVQNVANNTNEEAGDGTTTATVLA 425
AK + ++ +EE GDGTT+ VLA
Sbjct: 75 PAAKSMIELSRTQDEEVGDGTTSVIVLA 102
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/108 (27%), Positives = 49/108 (45%)
Frame = +3
Query: 162 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 341
G V +Q +AD + T+GP+ +L + G +T DG + + ++L +
Sbjct: 19 GTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDL----AH 74
Query: 342 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
AK + ++ +EE GDGTT+ VLA + I K P I
Sbjct: 75 PAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVI 122
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +3
Query: 270 GSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGF 449
G IT DG T+ + +E+ ++ AK++ +A + E GDGTT+ ++A + K G
Sbjct: 7 GDVTITNDGATILRMLEV----EHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGN 62
Query: 450 EKISKGAKPIEI 485
+ + P I
Sbjct: 63 DLVRNKIHPTSI 74
>12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,
3404071-3404562,3404718-3404821,3404913-3404994,
3405085-3405441,3405532-3406089,3406376-3406479,
3406575-3406650,3406764-3406898,3407192-3407494,
3407581-3408345,3409459-3412591,3412763-3412882
Length = 2445
Score = 29.5 bits (63), Expect = 1.5
Identities = 24/116 (20%), Positives = 54/116 (46%)
Frame = +3
Query: 90 VVRQSVTLHKTHQLARFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSW 269
V R + T+ +TH+ ++ +V G+D + VD+ +++ G + + S
Sbjct: 806 VNRDNATVEETHR-EQWVNSEVH-GSDSSDTAHEYVDLRTESIIHLSGISSEE-LGQSSS 862
Query: 270 GSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIA 437
+ +++ G++ V L D ++GA + Q + N+NEE + +A ++
Sbjct: 863 ITELVSRAGISSENKVLLDDAEADLGAAVAQTLNANSNEEVLEDLDNPAAIAEELS 918
>03_05_0205 - 21965782-21965979,21969169-21969417
Length = 148
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +3
Query: 216 VAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVAN 374
V V G +G Q G P+ +G A+ VEL KF I A V A+
Sbjct: 37 VGVAPGHRGMAASAGQEGGPPRDFSEGAVRARVVELVKKFDRIDADKVTETAD 89
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -3
Query: 280 LGEPQDCSRITFLPFGPIVTATASARMSTPCSIRALTS--APNLTSFA*NR--ANWC 122
L + + C +T + PIV A + TP +R+L S A +L+ R NWC
Sbjct: 67 LHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWC 123
>10_01_0030 -
386008-388056,388166-388360,388931-389062,389167-389538,
389753-389894,392274-392533,392737-393015,394796-394939
Length = 1190
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 237 KGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGA-KLVQNVANN 377
KG V+ + SWG TKDG+ + L D F N + ++QN+ +N
Sbjct: 103 KGPGVVQDDSWGGLSTTKDGL-----LTLLDCFINTNSLHVLQNIFDN 145
>12_02_0555 - 20410659-20410898
Length = 79
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 345 GAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKG 467
GA Q VAN T +E G + LA + +G +SKG
Sbjct: 12 GASEEQRVANTTVDEIGKTPLSEVELAELVQAQGAIMVSKG 52
>08_02_0866 +
22006822-22006899,22006997-22007080,22007621-22007719,
22007864-22007908,22008170-22008265,22009150-22009227,
22009864-22009949,22010038-22010104,22010192-22010254,
22010332-22010433,22010559-22010663,22010748-22010840,
22011380-22011468,22012049-22012268,22012816-22012899,
22013221-22013337,22013399-22013473,22013589-22013675,
22013766-22013828,22014833-22014949,22015231-22015323,
22015794-22015919,22015992-22016092,22016917-22016996,
22017023-22017093,22017200-22017256,22017430-22017573
Length = 839
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -2
Query: 311 LSDCHSIFCDLR--GTPGLLQNHVSAF 237
LS+CHS+FC+ R G++Q +S F
Sbjct: 287 LSECHSLFCEQRLYLIRGMVQQRISEF 313
>07_01_0956 + 8029297-8030285,8033204-8033330,8033350-8033640
Length = 468
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 296 SIFCDLRGTPGLLQNHVSAFWTHCDGN 216
S+F L+ PG NH+S ++ H N
Sbjct: 411 SLFDTLKSLPGFKDNHISFYYAHLVAN 437
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -3
Query: 280 LGEPQDCSRITFLPFGPIVTATASARMSTPCSIRALTS--APNLTSFA*NR--ANWC 122
L + + C +T + P+V A + TP +R+L S A +L+ R NWC
Sbjct: 67 LHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWC 123
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +2
Query: 209 GRGCRHNGSKRQKRDSGAVLGFP*DHKRWSDSR*GGRTERQIPEHRCQ 352
G G R G + ++D G G + D GG ++ P H Q
Sbjct: 417 GDGDREEGKEENEKDKGEADGEGEQEEEMKDKEKGGEERKEEPHHEKQ 464
>04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871
Length = 398
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 111 LHKTHQLARFYAKDVRFGADVRALMLQGVD 200
LH+ ++LAR+ +DVR A+ + L G+D
Sbjct: 128 LHEFNRLARYEPEDVRTDAEKQEKFLAGLD 157
>03_05_0527 +
25220375-25221425,25221513-25222182,25222347-25222440,
25222688-25222870
Length = 665
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 111 LHKTHQLARFYAKDVRFGADVRALMLQGVD 200
LH+ ++LAR+ +DVR A+ + L G+D
Sbjct: 201 LHEFNRLARYTPEDVRTDAEKQEKFLAGLD 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,081,119
Number of Sequences: 37544
Number of extensions: 235608
Number of successful extensions: 732
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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