Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_I22
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   3.2  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   4.2  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    23   5.6  
DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    23   7.4  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    22   9.8  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    22   9.8  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       22   9.8  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       22   9.8  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       22   9.8  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 290 RWSDSR*GGRTERQIPEHR 346
           RW+ S  GG  + +IP HR
Sbjct: 69  RWNSSEYGGVRDLRIPPHR 87


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 290 RWSDSR*GGRTERQIPEHR 346
           RW+ S  GG  + +IP HR
Sbjct: 101 RWNTSEYGGVRDLRIPPHR 119


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 143 CKRCEIRC*CKSPN 184
           CK C   C C SPN
Sbjct: 3   CKTCVADCKCTSPN 16


>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 92  CSSKCYFTQNTPISAILCKRCEIRC*CK 175
           C+S C      P + +  K+C I C C+
Sbjct: 36  CASSCQDICFEPPAELCDKKCNIGCFCE 63


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 86  SCCSSKCYFTQNTPISAILC 145
           SC S++C  T  TP     C
Sbjct: 125 SCSSNECVSTTETPTRHFFC 144


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +3

Query: 363 NVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEIR 488
           ++ ++TNE+ GD   T    A  +      + +KG  P   R
Sbjct: 365 SMCDSTNEDDGDDGHTLERAAEELTVRRSSRSTKGVPPQRFR 406


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +3

Query: 363 NVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEIR 488
           ++ ++TNE+ GD   T    A  +      + +KG  P   R
Sbjct: 135 SMCDSTNEDDGDDGHTLERAAEELTVRRSSRSTKGVPPQRFR 176


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +3

Query: 363 NVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEIR 488
           ++ ++TNE+ GD   T    A  +      + +KG  P   R
Sbjct: 141 SMCDSTNEDDGDDGHTLERAAEELTVRRSSRSTKGVPPQRFR 182


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +3

Query: 363 NVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEIR 488
           ++ ++TNE+ GD   T    A  +      + +KG  P   R
Sbjct: 135 SMCDSTNEDDGDDGHTLERAAEELTVRRSSRSTKGVPPQRFR 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,835
Number of Sequences: 2352
Number of extensions: 8938
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)