Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_I22
         (489 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084153-6|AAK84594.1|  568|Caenorhabditis elegans Heat shock pr...   192   1e-49
L36035-1|AAA28077.1|  568|Caenorhabditis elegans HSP60 protein.       187   4e-48
Z68318-10|CAA92697.1|  529|Caenorhabditis elegans Hypothetical p...    60   6e-10
U25632-1|AAA93233.1|  529|Caenorhabditis elegans CCT-2 protein.        60   6e-10
AL031268-2|CAA20331.1|  529|Caenorhabditis elegans Hypothetical ...    60   6e-10
Z35599-3|CAA84660.1|  542|Caenorhabditis elegans Hypothetical pr...    56   1e-08
Z32840-7|CAA83681.1|  542|Caenorhabditis elegans Hypothetical pr...    56   1e-08
U25698-1|AAA92843.1|  542|Caenorhabditis elegans CCT-5 protein.        56   1e-08
Z49068-8|CAA88861.1|  540|Caenorhabditis elegans Hypothetical pr...    56   1e-08
U25697-1|AAA92842.1|  540|Caenorhabditis elegans CCT-4 protein.        56   1e-08
AF067947-11|AAO25994.1|  455|Caenorhabditis elegans Hypothetical...    55   2e-08
AF067947-10|AAC19232.2|  535|Caenorhabditis elegans Hypothetical...    55   2e-08
Z66500-12|CAA91308.1|  549|Caenorhabditis elegans Hypothetical p...    52   3e-07
U07941-1|AAB05072.1|  549|Caenorhabditis elegans CCT-1 protein.        52   3e-07
U13070-3|AAM22058.1|  429|Caenorhabditis elegans Chaperonin cont...    43   1e-04
U13070-2|AAC46642.1|  539|Caenorhabditis elegans Chaperonin cont...    43   1e-04
AC024136-4|AAF35963.3|  543|Caenorhabditis elegans Hypothetical ...    43   1e-04
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ...    30   0.78 
Z81081-2|CAB03091.2|  451|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical ...    27   7.3  
AC024805-7|AAK39344.3|  248|Caenorhabditis elegans Hypothetical ...    27   7.3  
Z50109-2|CAA90434.1|  105|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF304121-1|AAG50234.1|  105|Caenorhabditis elegans 60S ribosomal...    27   9.7  

>AC084153-6|AAK84594.1|  568|Caenorhabditis elegans Heat shock
           protein protein 60 protein.
          Length = 568

 Score =  192 bits (468), Expect = 1e-49
 Identities = 90/120 (75%), Positives = 105/120 (87%)
 Frame = +3

Query: 129 LARFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVA 308
           + R YAKDV+FGA+ R  ML GV++LADAV+VTMGPKGRNVI+EQSWGSPKITKDGVTVA
Sbjct: 13  VVRSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVA 72

Query: 309 KGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEIR 488
           K ++LKDK+QN+GAKL+Q+VAN  NEEAGDGTT ATVLARAIAKEGFE I +G   +EIR
Sbjct: 73  KSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIRQGGNAVEIR 132


>L36035-1|AAA28077.1|  568|Caenorhabditis elegans HSP60 protein.
          Length = 568

 Score =  187 bits (455), Expect = 4e-48
 Identities = 88/120 (73%), Positives = 103/120 (85%)
 Frame = +3

Query: 129 LARFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVA 308
           + R YAKDV+FGA+ R  ML GV++LADAV+VTMGPKGRNVI+EQSWGSPKITKDGVTVA
Sbjct: 13  VVRSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVA 72

Query: 309 KGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEIR 488
           K ++LKDK+QN+GAKL+Q+VAN  NEEAGDGTT ATVL RAIAKEGFE+ S     +EIR
Sbjct: 73  KSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHSSRGNAVEIR 132


>Z68318-10|CAA92697.1|  529|Caenorhabditis elegans Hypothetical
           protein T21B10.7 protein.
          Length = 529

 Score = 60.5 bits (140), Expect = 6e-10
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
 Frame = +3

Query: 126 QLARFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 293
           Q+ +  A++ R G   R     G   + D V  T+GPKG + IL     +S G  K+T D
Sbjct: 5   QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63

Query: 294 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAK 473
           G T+ K + +     N  AK++ +++   + E GDGTT+ TVLA  + KE  + +++   
Sbjct: 64  GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119

Query: 474 P 476
           P
Sbjct: 120 P 120


>U25632-1|AAA93233.1|  529|Caenorhabditis elegans CCT-2 protein.
          Length = 529

 Score = 60.5 bits (140), Expect = 6e-10
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
 Frame = +3

Query: 126 QLARFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 293
           Q+ +  A++ R G   R     G   + D V  T+GPKG + IL     +S G  K+T D
Sbjct: 5   QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63

Query: 294 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAK 473
           G T+ K + +     N  AK++ +++   + E GDGTT+ TVLA  + KE  + +++   
Sbjct: 64  GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119

Query: 474 P 476
           P
Sbjct: 120 P 120


>AL031268-2|CAA20331.1|  529|Caenorhabditis elegans Hypothetical
           protein T21B10.7 protein.
          Length = 529

 Score = 60.5 bits (140), Expect = 6e-10
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
 Frame = +3

Query: 126 QLARFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 293
           Q+ +  A++ R G   R     G   + D V  T+GPKG + IL     +S G  K+T D
Sbjct: 5   QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63

Query: 294 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAK 473
           G T+ K + +     N  AK++ +++   + E GDGTT+ TVLA  + KE  + +++   
Sbjct: 64  GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119

Query: 474 P 476
           P
Sbjct: 120 P 120


>Z35599-3|CAA84660.1|  542|Caenorhabditis elegans Hypothetical
           protein C07G2.3a protein.
          Length = 542

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 31/94 (32%), Positives = 55/94 (58%)
 Frame = +3

Query: 204 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 383
           +A+ +  ++GP+G + +L    G   IT DG T+ + +++    Q+  AKL+  ++ + +
Sbjct: 45  VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100

Query: 384 EEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
            E GDGTT   VLA A+ +E  + I +G  PI+I
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134


>Z32840-7|CAA83681.1|  542|Caenorhabditis elegans Hypothetical
           protein C07G2.3a protein.
          Length = 542

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 31/94 (32%), Positives = 55/94 (58%)
 Frame = +3

Query: 204 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 383
           +A+ +  ++GP+G + +L    G   IT DG T+ + +++    Q+  AKL+  ++ + +
Sbjct: 45  VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100

Query: 384 EEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
            E GDGTT   VLA A+ +E  + I +G  PI+I
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134


>U25698-1|AAA92843.1|  542|Caenorhabditis elegans CCT-5 protein.
          Length = 542

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 31/94 (32%), Positives = 55/94 (58%)
 Frame = +3

Query: 204 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 383
           +A+ +  ++GP+G + +L    G   IT DG T+ + +++    Q+  AKL+  ++ + +
Sbjct: 45  VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100

Query: 384 EEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
            E GDGTT   VLA A+ +E  + I +G  PI+I
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134


>Z49068-8|CAA88861.1|  540|Caenorhabditis elegans Hypothetical
           protein K01C8.10 protein.
          Length = 540

 Score = 56.0 bits (129), Expect = 1e-08
 Identities = 35/113 (30%), Positives = 55/113 (48%)
 Frame = +3

Query: 147 KDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELK 326
           KD      VR   +     +ADAV  ++GP+G + +++   G   IT DG T+   + + 
Sbjct: 24  KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83

Query: 327 DKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
                  AK++  ++   + EAGDGTTT  V+A A+       +SKG  P  I
Sbjct: 84  HPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTI 132


>U25697-1|AAA92842.1|  540|Caenorhabditis elegans CCT-4 protein.
          Length = 540

 Score = 56.0 bits (129), Expect = 1e-08
 Identities = 35/113 (30%), Positives = 55/113 (48%)
 Frame = +3

Query: 147 KDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELK 326
           KD      VR   +     +ADAV  ++GP+G + +++   G   IT DG T+   + + 
Sbjct: 24  KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83

Query: 327 DKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
                  AK++  ++   + EAGDGTTT  V+A A+       +SKG  P  I
Sbjct: 84  HPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTI 132


>AF067947-11|AAO25994.1|  455|Caenorhabditis elegans Hypothetical
           protein T10B5.5b protein.
          Length = 455

 Score = 55.2 bits (127), Expect = 2e-08
 Identities = 29/97 (29%), Positives = 52/97 (53%)
 Frame = +3

Query: 186 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 365
           +    ++AD++  T+GP+G + ++  S G+  I+ DG T+ K +++        A  + +
Sbjct: 26  INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFP----AASTMVD 81

Query: 366 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKP 476
           +A + + E GDGTT+  VLA  I K+    I  G  P
Sbjct: 82  IARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHP 118


>AF067947-10|AAC19232.2|  535|Caenorhabditis elegans Hypothetical
           protein T10B5.5a protein.
          Length = 535

 Score = 55.2 bits (127), Expect = 2e-08
 Identities = 29/97 (29%), Positives = 52/97 (53%)
 Frame = +3

Query: 186 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 365
           +    ++AD++  T+GP+G + ++  S G+  I+ DG T+ K +++        A  + +
Sbjct: 26  INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFP----AASTMVD 81

Query: 366 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKP 476
           +A + + E GDGTT+  VLA  I K+    I  G  P
Sbjct: 82  IARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHP 118


>Z66500-12|CAA91308.1|  549|Caenorhabditis elegans Hypothetical
           protein T05C12.7 protein.
          Length = 549

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 29/108 (26%), Positives = 54/108 (50%)
 Frame = +3

Query: 162 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 341
           G  +R+  +     +A+ V  ++GP G + +L    G   +T DG T+ K +E+    ++
Sbjct: 18  GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV----EH 73

Query: 342 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
              K++  +A   +EE GDGTT+  ++A  + K   E + +   P  I
Sbjct: 74  PAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTI 121


>U07941-1|AAB05072.1|  549|Caenorhabditis elegans CCT-1 protein.
          Length = 549

 Score = 51.6 bits (118), Expect = 3e-07
 Identities = 29/108 (26%), Positives = 54/108 (50%)
 Frame = +3

Query: 162 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 341
           G  +R+  +     +A+ V  ++GP G + +L    G   +T DG T+ K +E+    ++
Sbjct: 18  GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV----EH 73

Query: 342 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKPIEI 485
              K++  +A   +EE GDGTT+  ++A  + K   E + +   P  I
Sbjct: 74  PAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTI 121


>U13070-3|AAM22058.1|  429|Caenorhabditis elegans Chaperonin
           containing tcp-1 protein6, isoform b protein.
          Length = 429

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 26/99 (26%), Positives = 46/99 (46%)
 Frame = +3

Query: 180 LMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLV 359
           L + G   L D +   +GPKG   +L    G  K+TKDG  +   + +    Q+  A ++
Sbjct: 22  LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAI----QHPTASMI 77

Query: 360 QNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKP 476
              +   ++  GDGTT+  +L   + K+    + +G  P
Sbjct: 78  AKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHP 116


>U13070-2|AAC46642.1|  539|Caenorhabditis elegans Chaperonin
           containing tcp-1 protein6, isoform a protein.
          Length = 539

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 26/99 (26%), Positives = 46/99 (46%)
 Frame = +3

Query: 180 LMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLV 359
           L + G   L D +   +GPKG   +L    G  K+TKDG  +   + +    Q+  A ++
Sbjct: 22  LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAI----QHPTASMI 77

Query: 360 QNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAKP 476
              +   ++  GDGTT+  +L   + K+    + +G  P
Sbjct: 78  AKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHP 116


>AC024136-4|AAF35963.3|  543|Caenorhabditis elegans Hypothetical
           protein F54A3.3 protein.
          Length = 543

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 24/88 (27%), Positives = 42/88 (47%)
 Frame = +3

Query: 162 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 341
           G  V+   +     +AD +  ++GP+    +L    G   +T DG  + + + +K     
Sbjct: 21  GHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHP--- 77

Query: 342 IGAKLVQNVANNTNEEAGDGTTTATVLA 425
             AK +  +A   +EE GDGTT+  +LA
Sbjct: 78  -AAKSMIEIARTQDEETGDGTTSVIILA 104


>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
           protein M01E10.2 protein.
          Length = 1286

 Score = 30.3 bits (65), Expect = 0.78
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -3

Query: 328 SFSSTPLATVTPSFVILGEPQDCSRITFLPFGPIVTATASARMST 194
           S  + P  TVTP  V   E  D +    +P  PIVT T +A  ST
Sbjct: 610 SSPTVPTTTVTPEVVREDEDYDYTNEFAIPNEPIVTTTTTAIAST 654


>Z81081-2|CAB03091.2|  451|Caenorhabditis elegans Hypothetical
           protein F42D1.3 protein.
          Length = 451

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -3

Query: 463 FEIFSNPSLAIALARTXXXXXXXXXXSFVLFATFCTNLAPMFWNLSFSS 317
           F +F+N ++A+ L++            ++  A     L P+ W L F S
Sbjct: 71  FAVFANAAVALVLSKKHMITPTNVVLKYMAIAELLVGLVPLPWTLFFFS 119


>Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical
           protein R11G10.2 protein.
          Length = 576

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 246 NVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKL 356
           N+++   WG P++ +DG   +   EL++  ++ GA+L
Sbjct: 259 NLMISSEWGHPRLLRDGFMPS---ELENVSESFGARL 292


>AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical
           protein Y95B8A.7 protein.
          Length = 608

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = +2

Query: 143 CKRCEIRC*CKSPNAAGR*HSSGRGCRHNGSKRQKRDSGAVLGFP*DHKRWSDSR 307
           CK C+  C    PNA    H  GR  RH  S RQK D   V+     +KR  + R
Sbjct: 177 CKLCD--CKFSDPNAK-EIHIKGR--RHRVSYRQKIDPTLVVDVKPSNKRSQEKR 226


>AC024805-7|AAK39344.3|  248|Caenorhabditis elegans Hypothetical
           protein Y51H7C.5 protein.
          Length = 248

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 168 DVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDG 296
           ++  L L G D+L D   +T G +   + +E  W S +   +G
Sbjct: 161 NITNLTLHGKDVLTDPTLLTKGLRWTTLGVEYDWNSKEYPPNG 203


>Z50109-2|CAA90434.1|  105|Caenorhabditis elegans Hypothetical
           protein C09H10.2 protein.
          Length = 105

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 338 EHRCQISTKRCK*YERGGRRR 400
           +H+ Q+  KRCK +E GG+++
Sbjct: 77  KHKKQLPIKRCKHFELGGQKK 97


>AF304121-1|AAG50234.1|  105|Caenorhabditis elegans 60S ribosomal
           protein L44 L41 protein.
          Length = 105

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 338 EHRCQISTKRCK*YERGGRRR 400
           +H+ Q+  KRCK +E GG+++
Sbjct: 77  KHKKQLPIKRCKHFELGGQKK 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,571,306
Number of Sequences: 27780
Number of extensions: 213451
Number of successful extensions: 569
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)