Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I21
(407 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 179 7e-46
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 68 3e-12
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 66 1e-11
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 63 7e-11
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 46 2e-05
06_01_1053 - 8328902-8329156,8330538-8330804,8330895-8332343,833... 32 0.15
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 32 0.15
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 29 1.1
08_02_0582 + 18993816-18993890,18994050-18994446,18995645-189957... 29 1.4
10_08_0521 + 18500105-18500529,18501216-18501284,18501467-185015... 29 1.9
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 29 1.9
08_02_0372 - 16381571-16381721,16381915-16381993,16382535-16382724 29 1.9
08_01_0700 + 6171521-6171710,6172253-6172331,6172525-6172675 29 1.9
08_01_0033 + 244930-245105,245297-245344,245835-246539,246652-24... 29 1.9
01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54... 29 1.9
07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708 28 2.5
10_08_0413 + 17742993-17743500,17744301-17744426,17745196-177453... 27 4.3
05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818 27 4.3
04_04_0605 + 26549904-26551939,26553931-26554180,26554764-265548... 27 5.7
01_05_0592 - 23483834-23484285,23484357-23484455,23484534-234847... 27 7.6
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 179 bits (436), Expect = 7e-46
Identities = 82/131 (62%), Positives = 108/131 (82%)
Frame = +2
Query: 8 ASKLIGADADFFSEMVVDAAQAIKITDSKGNSAYPIKAVNILKAHGRSARESILVKGYAL 187
+SKLI +D+DFF+ +VVDA QA+K T++KG YPIK++NILKAHG+SA++S L+ GYAL
Sbjct: 142 SSKLINSDSDFFANLVVDAVQAVKTTNAKGEVKYPIKSINILKAHGKSAKDSYLLNGYAL 201
Query: 188 NCTVASQAMPKKILNAKIACLDFSLQKTKMKLGVQVLITDPEKLDAIRARELDITKERLQ 367
N A+Q MP ++ A+IACLDF+LQKTKM+LGVQVL+TDP +L+ IR RE DITKER++
Sbjct: 202 NTGRAAQGMPTRVTPARIACLDFNLQKTKMQLGVQVLVTDPRELEKIRQRESDITKERIE 261
Query: 368 KILSTGVNVIL 400
KIL G NV+L
Sbjct: 262 KILKAGANVVL 272
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 67.7 bits (158), Expect = 3e-12
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +2
Query: 8 ASKLIGADADFFSEMVVDAAQAIKITDSKGNSAYPIKAVNILKAHGRSARESILVKGYAL 187
+SKLIG + +FF+ MVVDA AI D + + I K G + R+S LV G A
Sbjct: 167 SSKLIGGEKEFFASMVVDAVLAISNDDR-------LNLLGIKKVPGGTMRDSFLVNGVAF 219
Query: 188 NCTVAS---QAMPKKILNAKIACLDFSLQKTKMKLGVQVLITDPEKLDAIRARELDITKE 358
T + + PKK L+ KI L+ L+ K ++ ++DP + +I E +I +
Sbjct: 220 KKTFSYAGFEQQPKKFLSPKILLLNIELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYD 279
Query: 359 RLQKILSTGVNVIL 400
+L K + +G ++L
Sbjct: 280 KLDKCVKSGAKIVL 293
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 66.1 bits (154), Expect = 1e-11
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Frame = +2
Query: 8 ASKLIGADADFFSEMVVDAAQAIKITDSKGNSAYPIKAVNILKAHGRSARESILVKGYAL 187
+SK++ D ++F+E+ VDA +K + + ++A+ ILK G S ++S L +G+ L
Sbjct: 161 SSKILSQDKEYFAELAVDAVLRLKGSTN-------LEAIQILKIPGGSLKDSFLDEGFIL 213
Query: 188 NCTVASQAMPKKILNAKIACLDFSLQKTKMKL-GVQVLITDPEKLDAIRARELDITKERL 364
+ + PK+I NAKI + ++ K+K+ G +V + K+ I A E +E++
Sbjct: 214 DKKIGL-GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEAAEKQKMREKV 272
Query: 365 QKILSTGVN 391
QKI+ G+N
Sbjct: 273 QKIIGHGIN 281
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 63.3 bits (147), Expect = 7e-11
Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = +2
Query: 8 ASKLIGADADFFSEMVVDAAQAIKITDSKGNSAYPIKAVNILKAHGRSARESILVKGYAL 187
+SK++ D ++F+ + VDA +K + + ++A+ ILK G S ++S L +G+ L
Sbjct: 138 SSKILSQDKEYFAGLAVDAVLRLKGSTN-------LEAIQILKKTGGSLKDSFLDEGFIL 190
Query: 188 NCTVASQAMPKKILNAKIACLDFSLQKTKMKL-GVQVLITDPEKLDAIRARELDITKERL 364
+ + PK+I NAKI + ++ K+K+ G +V + K+ I A E +E++
Sbjct: 191 DKKIGL-GQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMAKVAEIEAAEKQKMREKV 249
Query: 365 QKILSTGVN 391
QKI+ G+N
Sbjct: 250 QKIIGHGIN 258
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 45.6 bits (103), Expect = 2e-05
Identities = 35/132 (26%), Positives = 60/132 (45%)
Frame = +2
Query: 8 ASKLIGADADFFSEMVVDAAQAIKITDSKGNSAYPIKAVNILKAHGRSARESILVKGYAL 187
+SK++ +E+ V A A+ + K + IK + G ++ LV G +
Sbjct: 170 SSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDLIKVEGKV---GGKLEDTELVYGIIV 226
Query: 188 NCTVASQAMPKKILNAKIACLDFSLQKTKMKLGVQVLITDPEKLDAIRARELDITKERLQ 367
+ ++ MPK+I +AKIA L + K K +V I EK +R +E E +Q
Sbjct: 227 DKDMSHPQMPKRIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQMLREQEQKYFDEMVQ 286
Query: 368 KILSTGVNVILC 403
K G +++C
Sbjct: 287 KCKDVGATLVIC 298
>06_01_1053 -
8328902-8329156,8330538-8330804,8330895-8332343,
8332461-8332619,8333246-8333372,8333444-8333775,
8333859-8334593,8334735-8335073,8335160-8335313,
8335405-8336154,8336242-8336372
Length = 1565
Score = 32.3 bits (70), Expect = 0.15
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 32 ADFFSEMVVDAAQAIKITDSKGNSAYPIKAVNILKAHGRSARESILVKGYALNCTVASQA 211
+D S + AA ++ SKG S P V + + +S +KG + V +
Sbjct: 251 SDIISSLAWQAATFVRPDTSKGGSMDPTDYVKVKCVASGNPNDSTFIKGVVCSKNVKHKR 310
Query: 212 MPKKILNAKIACLDFSL--QKTKMKLGVQVLITDPEK 316
M K N ++ L +L QK KL I + EK
Sbjct: 311 MVSKHENPRLLLLGGALEHQKASNKLASINSILEQEK 347
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 32.3 bits (70), Expect = 0.15
Identities = 31/131 (23%), Positives = 53/131 (40%)
Frame = +2
Query: 8 ASKLIGADADFFSEMVVDAAQAIKITDSKGNSAYPIKAVNILKAHGRSARESILVKGYAL 187
ASK G + D +V DA + K + + + V + K G S +V+G L
Sbjct: 166 ASKQFGQE-DILCPLVADACMQVC---PKNPANFNVDNVRVAKLLGGGLHNSSVVRGMVL 221
Query: 188 NCTVASQAMPKKILNAKIACLDFSLQKTKMKLGVQVLITDPEKLDAIRARELDITKERLQ 367
K++ AKIA + + + VLI E+L+ E +E ++
Sbjct: 222 KNDAVGSI--KRVEKAKIAVFAGGVDTSATETKGTVLIHSAEQLENYAKTEEAKVEELIK 279
Query: 368 KILSTGVNVIL 400
+ +G VI+
Sbjct: 280 AVADSGAKVIV 290
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 29.5 bits (63), Expect = 1.1
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = +2
Query: 62 AAQAIKITDSKGNSAYPIKAVNILKAHGRSARESILVKGYALNCTVASQAMPKKILNAKI 241
AA ++ KG S P V + +S LV+G + V + M + +NAK+
Sbjct: 296 AAGYVRPDTKKGGSMDPTDYVKVKCLASGDPSDSNLVRGVVCSKNVKHKRMASEHVNAKL 355
Query: 242 ACLDFSL--QKTKMKLGVQVLITDPEKLDAIRARELDITKERLQKIL 376
L +L QK KL I + EK + +RA I R +L
Sbjct: 356 LILGGALEYQKVTNKLASIDTILEQEK-EHLRAIVAKIESRRPNVLL 401
>08_02_0582 +
18993816-18993890,18994050-18994446,18995645-18995748,
18995863-18996004,18996118-18996237,18996341-18996465,
18996903-18997061,18997161-18997323,18997420-18997545,
18997628-18997711,18997761-18998173,18998199-18998273,
18998463-18998663,18998862-18998971,18999072-18999156,
18999365-18999493,18999596-18999701,18999825-18999913,
19000064-19000366
Length = 1001
Score = 29.1 bits (62), Expect = 1.4
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -2
Query: 379 GENLLQAFLRDIKFPCTYRIQLLRISYQYLNAEFH-LCLLQREVQTGDLRIKYLLRHG 209
GE LLQ F+ DI FP RI +L I Y L +H CLL++ + T +L + L G
Sbjct: 484 GEALLQLFIEDITFP---RI-ILNI-YWILIKNYHSTCLLEQWLVTMELVPGFALYRG 536
>10_08_0521 + 18500105-18500529,18501216-18501284,18501467-18501555,
18501726-18501838,18502023-18502124,18502576-18502663,
18502795-18503361,18503766-18504149,18504168-18504384,
18504466-18504548,18505174-18505256,18505796-18506032,
18506481-18506658,18506814-18507328,18507740-18507916,
18508385-18508768,18508885-18509031
Length = 1285
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 202 GDSTVQGVTLDQYTLPSTPAVR-F*DVHSFDRICGVTLGVCDLYSLR 65
G S+ ++++ T P TPAVR D H R+C + L C L+ R
Sbjct: 921 GRSSFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLL-FCLLFRRR 966
>09_01_0155 -
2301903-2302151,2302334-2302491,2302651-2302819,
2303796-2304839,2305792-2306075,2306318-2307333,
2307937-2308085
Length = 1022
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 11 SKLIGADADFFSEMVVDAAQAIKITDSKGNSAYPIKAVNILKAHGRSARE 160
S L+ + D E + A + D GNS P+K V L HG+S +E
Sbjct: 326 SDLLHIERDAELEFTQEELNATPVMD--GNSKKPLKPVEYLVTHGQSQQE 373
>08_02_0372 - 16381571-16381721,16381915-16381993,16382535-16382724
Length = 139
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 227 LNAKIACLDFSLQKTKMKLGVQVLITD 307
+ AK+AC D+ + ++ LGVQV ITD
Sbjct: 103 MGAKLAC-DYMCDRGQISLGVQVYITD 128
>08_01_0700 + 6171521-6171710,6172253-6172331,6172525-6172675
Length = 139
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 227 LNAKIACLDFSLQKTKMKLGVQVLITD 307
+ AK+AC D+ + ++ LGVQV ITD
Sbjct: 103 MGAKLAC-DYMCDRGQISLGVQVYITD 128
>08_01_0033 +
244930-245105,245297-245344,245835-246539,246652-246796,
246893-247240,247882-248721,248786-248832,249470-249596,
249672-249836,249973-251370,251453-251713,251802-252161
Length = 1539
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +2
Query: 35 DFFSEMVVDAAQAIKITDSKGNSAYPIKAVNILKAHGRSARESILVKGYALNCTVASQAM 214
D + + +AA IK SKG P + + + R+S ++KG A + M
Sbjct: 268 DILTSLSWEAALLIKPDASKGKEMDPGSYIKVKCIASGTRRQSEVIKGLVFKKNAAHKHM 327
Query: 215 PKKILNAKIACL 250
P N ++ L
Sbjct: 328 PTSCHNPRLLLL 339
>01_01_0071 +
548255-548399,548478-548651,548787-548892,548992-549130,
549216-549293,549395-549460,550061-550201,550417-550527,
550614-550655,550739-550825,551033-551118,551681-551684
Length = 392
Score = 28.7 bits (61), Expect = 1.9
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +2
Query: 68 QAIKITDSKGNSAYPIKAVNILKAHGRSARESILVKGYAL-NCTVASQAMPKKILNAKIA 244
+AI DS G ++ I V I + GR I+ K +L CT +P KI + A
Sbjct: 198 RAIAARDS-GTFSWEIAPVEI--SSGRGKPPLIVDKDESLAKCTSLPSRLPSKIRSDGAA 254
Query: 245 CLDF-SLQKTKMKLGVQVLITDPEKLDAIRARELDITKERL 364
+ S QK K LG+QV+ DA +A EL T L
Sbjct: 255 AIVLVSGQKAK-SLGLQVIARIRGYADAAQAPELFTTTPAL 294
>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
Length = 2033
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -3
Query: 348 ISSSRARIASNFSGSVIST*TPSFIFVFCSEKSKQAIFALSIFLGMACEATVQ 190
+ SRAR+ + G + +FV+CS + A+F + + L + +ATV+
Sbjct: 1859 VRRSRARLLARSPGEAARVPSDGKVFVYCS-SAHLALFVVVLALNSSRDATVE 1910
>10_08_0413 +
17742993-17743500,17744301-17744426,17745196-17745323,
17745462-17745675,17745932-17746163,17746233-17746383,
17746744-17746896,17747132-17747155
Length = 511
Score = 27.5 bits (58), Expect = 4.3
Identities = 7/20 (35%), Positives = 17/20 (85%)
Frame = -2
Query: 295 YLNAEFHLCLLQREVQTGDL 236
YL+ EFH+C++ R++++ ++
Sbjct: 350 YLHQEFHVCIIHRDIKSSNV 369
>05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818
Length = 743
Score = 27.5 bits (58), Expect = 4.3
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +2
Query: 158 ESILVKGYALNCTVASQAMPKKILNAKIACLDFSLQKTKMKLGVQVLITDPEKLDAIRAR 337
ES + K N ++A+ K+L+ ++A + LQKT+ KL V T + + + AR
Sbjct: 478 ESNIAKQVLTNKIAEAEAV-SKVLSDELASVRDVLQKTQEKLDV----TSNQLVSTMEAR 532
Query: 338 ELDITKERL 364
E D+ KE L
Sbjct: 533 E-DLNKELL 540
>04_04_0605 + 26549904-26551939,26553931-26554180,26554764-26554829,
26555194-26555388,26555830-26556141,26556537-26556595,
26557138-26557381,26557466-26557528,26557997-26558386
Length = 1204
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/81 (22%), Positives = 34/81 (41%)
Frame = +2
Query: 122 VNILKAHGRSARESILVKGYALNCTVASQAMPKKILNAKIACLDFSLQKTKMKLGVQVLI 301
VN+++AHG S K ++ + KK +I CL KT + + + VL
Sbjct: 884 VNLIEAHGWPTGGSSAYKVAKAALNAYTRILAKKYPTLRINCLTPGYVKTDISMHMGVLT 943
Query: 302 TDPEKLDAIRARELDITKERL 364
+ ++++ R T +
Sbjct: 944 PEEGASNSVKNRNRGTTSSAI 964
>01_05_0592 -
23483834-23484285,23484357-23484455,23484534-23484702,
23485049-23485363,23485561-23485767,23485852-23486106,
23486575-23486736
Length = 552
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 305 DPEKLDAIRARELDITKERLQKILSTGVNV 394
DP + D + E I KER+ KI STG+ V
Sbjct: 92 DPNREDP-ESLEFKIMKERMYKIFSTGIVV 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,977,754
Number of Sequences: 37544
Number of extensions: 217257
Number of successful extensions: 603
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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