Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I19
(365 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 73 5e-14
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 73 9e-14
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 71 2e-13
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 71 3e-13
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 69 9e-13
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 69 1e-12
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 58 2e-09
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 55 1e-08
01_06_1306 + 36151907-36154369 30 0.48
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 29 1.5
02_01_0167 - 1159231-1159263,1159348-1159419,1159957-1160052,116... 29 1.5
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322... 28 2.6
09_04_0325 + 16689613-16689772,16690043-16690329 27 3.4
06_03_0536 + 21906583-21908037 27 3.4
06_01_0929 - 7171395-7171676,7172019-7172219,7172438-7172524,717... 27 3.4
03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559 27 3.4
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 27 6.0
07_03_0244 - 15715047-15715163,15716672-15716824,15718629-157187... 27 6.0
03_05_0915 + 28755584-28756139,28756695-28756846,28756994-287569... 27 6.0
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239... 26 7.9
10_06_0033 + 9865963-9866090,9868173-9868253,9868358-9868375,986... 26 7.9
01_06_0928 + 33085403-33089224 26 7.9
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 73.3 bits (172), Expect = 5e-14
Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Frame = +3
Query: 153 RLNDMMTWRAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GS 326
R +M+ + + + T+ G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E G+
Sbjct: 23 RYEEMVEFMEKVAKTTDVG-ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGN 81
Query: 327 ERKHEMAEEYR 359
E +EYR
Sbjct: 82 EAYVASIKEYR 92
Score = 32.3 bits (70), Expect = 0.12
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 98 STMSVDKEELVQRAKLAEQAERYDDM 175
S +EE V AKLAEQAERY++M
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEM 27
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 72.5 bits (170), Expect = 9e-14
Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 4/64 (6%)
Frame = +3
Query: 186 MKEVTET--GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKHEMAEE 353
M++V +T EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E G+E + + +E
Sbjct: 250 MEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRCTLIKE 309
Query: 354 YRVK 365
YR K
Sbjct: 310 YRGK 313
Score = 32.7 bits (71), Expect = 0.091
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 95 SSTMSVDKEELVQRAKLAEQAERYDDM 175
S + +EE V AKLAEQAERY++M
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEM 246
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 71.3 bits (167), Expect = 2e-13
Identities = 38/64 (59%), Positives = 50/64 (78%), Gaps = 4/64 (6%)
Frame = +3
Query: 186 MKEVTET--GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKHEMAEE 353
M++V +T EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK E G+E + + ++
Sbjct: 32 MEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDRVTLIKD 91
Query: 354 YRVK 365
YR K
Sbjct: 92 YRGK 95
Score = 33.1 bits (72), Expect = 0.069
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 95 SSTMSVDKEELVQRAKLAEQAERYDDM 175
S+ + +EE V AKLAEQAERY++M
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEM 28
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 70.9 bits (166), Expect = 3e-13
Identities = 35/53 (66%), Positives = 43/53 (81%), Gaps = 2/53 (3%)
Frame = +3
Query: 213 ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GSERKHEMAEEYRVK 365
EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK E G+E + +EYR K
Sbjct: 37 ELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGK 89
Score = 31.9 bits (69), Expect = 0.16
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2
Query: 110 VDKEELVQRAKLAEQAERYDDM 175
+ +EE V AKLAEQAERY++M
Sbjct: 1 MSREENVYMAKLAEQAERYEEM 22
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 69.3 bits (162), Expect = 9e-13
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +3
Query: 207 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEG 323
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEG 56
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 68.5 bits (160), Expect = 1e-12
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 207 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEG 323
G EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK EG
Sbjct: 45 GGELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEG 83
Score = 33.5 bits (73), Expect = 0.052
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDM 175
+EE+V AKLAEQAERY++M
Sbjct: 10 REEMVYMAKLAEQAERYEEM 29
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 58.4 bits (135), Expect = 2e-09
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +3
Query: 183 AMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKHEMAEEY 356
AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E EY
Sbjct: 4 AMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQTAEY 63
Query: 357 RVK 365
R K
Sbjct: 64 RRK 66
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 55.2 bits (127), Expect = 1e-08
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = +3
Query: 153 RLNDMMTWRAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSER 332
R +DM+ + MK + V++S EER L SV +K +GARR+SWR++ S+EQK ++
Sbjct: 19 RYDDMVEF---MKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRILESLEQKVTAGDQ 75
Query: 333 KHEMAEEYRVK 365
Y+ K
Sbjct: 76 PGVTINGYKKK 86
Score = 35.9 bits (79), Expect = 0.010
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +2
Query: 113 DKEELVQRAKLAEQAERYDDM 175
++E++V+ AKLAEQAERYDDM
Sbjct: 3 EREKVVRLAKLAEQAERYDDM 23
>01_06_1306 + 36151907-36154369
Length = 820
Score = 30.3 bits (65), Expect = 0.48
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 129 YNAPSWLSRLNDMMTWRAAMKEVTETGVELSNEERNLLSVA 251
YNAP +++R + + +A+ ++ ET + NE+R L+ A
Sbjct: 688 YNAPFFVTRFREALFHYSAIFDMLETNIPKDNEQRLLIESA 728
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 331 LSDPSVFCSIEEMTRHDDRRAPTTFL*ATERR 236
L+D S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>02_01_0167 -
1159231-1159263,1159348-1159419,1159957-1160052,
1160248-1160358,1160768-1160800,1160963-1161076
Length = 152
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 229 KETFFPLLIKMWSAPDGHH-GESFPLLNRKPKGRKENMRWQ 348
+E PLL+++++ GHH E F + ++PK + W+
Sbjct: 36 REKTCPLLLRVFTKVGGHHQNEEFAVRGKEPKDEVQIYTWK 76
>11_01_0419 +
3226224-3226756,3228010-3228169,3228256-3228435,
3228525-3228659,3229262-3229344,3229442-3229535,
3229649-3229735
Length = 423
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +2
Query: 188 EGSDGNRRRAQQ-RRKKPSFRCL*KCGRRPTVIM 286
E +DG RRR++Q RR++P R + G RP++ M
Sbjct: 95 EAADGGRRRSRQGRRRRPQRRR--RRGSRPSLFM 126
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 155 AERYDDMACRDEGSDGNRRRAQQRRKKP 238
A R+DD+ D G +G RR ++ K P
Sbjct: 25 AARHDDLLSPDAGHEGTRRSRRRTAKSP 52
>06_03_0536 + 21906583-21908037
Length = 484
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -1
Query: 197 HFLHRGTPCHHIVQPAQPTWRVVLVPPYRRTSWTMEDIDFTDALVGRVKQVIN 39
H LH CH ++ + WR V +P +R S ++ +T++L + ++N
Sbjct: 359 HPLHVTAFCHRLLSGDEREWRPVCMPEHR--SNISSNLVWTESLFALLYSILN 409
>06_01_0929 -
7171395-7171676,7172019-7172219,7172438-7172524,
7172973-7173023,7173883-7173987,7174074-7174185,
7174284-7174366,7174434-7174557,7174822-7174973
Length = 398
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 165 MMTWRAAMKEVTETGVELSN--EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKH 338
++T RA + + E+ N +ERN + +Y N +RSS R + K E ++
Sbjct: 289 ILTKRAELSKFETEYREIDNLLKERNEIHASYTNNSPLKRSSSRSKAKSPSKFSKGEEEN 348
Query: 339 EMAEEYRVK 365
+E +VK
Sbjct: 349 SQRKEKKVK 357
>03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559
Length = 789
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGN----RRRAQQRRKKPSFRCL*KCGRRPTVI 283
K E + K A + E D RD G N RRR ++R P + + C R +
Sbjct: 417 KAEAKGKTKRASREEEEDGKVVRDRGGAANAGAERRRRREREPAPRRQLVAACERMDSFD 476
Query: 284 MA 289
MA
Sbjct: 477 MA 478
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 9 EKPKKFCNLLVNYLFYPSNKGISEI 83
EKP KFC+ VN L Y + +G +I
Sbjct: 508 EKPDKFCSQFVNKLIY-AREGAKDI 531
>07_03_0244 -
15715047-15715163,15716672-15716824,15718629-15718748,
15718830-15719045,15719902-15719968,15720051-15720125,
15720607-15720698,15721053-15721154,15721642-15721711,
15721788-15721846,15721947-15722031,15722443-15722520,
15722627-15722725,15722819-15722910,15725572-15725661,
15725937-15725995,15727966-15728281,15728627-15728702,
15729998-15730308,15730577-15730634,15731082-15731092,
15731247-15731397,15733372-15733778
Length = 967
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = -2
Query: 361 TLYSSAISCFLSDPSVFCSIEEMTRHDD 278
+L ++ IS +DP ++CS+ ++T +DD
Sbjct: 567 SLINARISVTPNDPRLWCSLGDVTNNDD 594
>03_05_0915 +
28755584-28756139,28756695-28756846,28756994-28756996,
28757587-28757690,28758033-28758121,28758682-28758825,
28759194-28759291,28759380-28759502,28760045-28760113,
28760206-28760406
Length = 512
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +2
Query: 122 ELVQRAKLAEQAERYDDMACR---DEGSDGNRRRAQQRRKKPSFR 247
EL+ LA + DD++ R D SDG RRR ++ ++K R
Sbjct: 13 ELLGEGGLAAADDADDDLSPRSFPDTTSDGQRRRRRRSKRKRGLR 57
>11_01_0319 -
2396835-2396951,2397035-2397105,2397219-2397297,
2397417-2397458,2397670-2397723,2397836-2397868,
2397959-2398039,2398144-2398230,2398313-2398388,
2398633-2398808,2398912-2399034,2399249-2399361,
2399521-2399632,2400054-2400273,2401986-2402314,
2402408-2402713,2403580-2403878,2404079-2404181,
2404266-2404369,2404840-2404906,2404911-2405076,
2405241-2405956
Length = 1157
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 95 SSTMSVDKEELVQRAKLAEQAERYDDMACRDEGS-DGNRRRAQQRRKKPS 241
SS+ D+ + + + + +R D RD G D RRR+ QRRK+P+
Sbjct: 44 SSSGDDDRSRRHRHDESSRRRQR-DQSHRRDRGGHDERRRRSPQRRKEPT 92
>10_06_0033 +
9865963-9866090,9868173-9868253,9868358-9868375,
9869257-9869374,9869724-9869795,9870049-9870066,
9870231-9870551,9870652-9870760,9871562-9871736,
9871761-9871828,9873147-9873227,9873541-9873767
Length = 471
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -1
Query: 272 GADHIFISNGKKVSFFVAELDAGFRHFLHRGTPCHHIVQPAQPTWRVVL 126
GA+++ N + +S++ + DA + + RGT H ++ P W L
Sbjct: 260 GANYVERQNSE-ISYYADDEDANRKKYTKRGTFRHKFLRMLLPFWSSAL 307
>01_06_0928 + 33085403-33089224
Length = 1273
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 141 SWLSRLNDMMTWRAAMK 191
S LSR D+ TWRAA+K
Sbjct: 370 SQLSRKKDIATWRAALK 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,419,257
Number of Sequences: 37544
Number of extensions: 209692
Number of successful extensions: 776
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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