Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I19
(365 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 29 0.072
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 25 0.89
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 24 2.0
Z69977-1|CAA93817.1| 151|Anopheles gambiae ribosomal protein RS... 23 3.6
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 3.6
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 23 3.6
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 4.7
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 22 6.3
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 22 6.3
AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR ... 22 8.3
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 22 8.3
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 28.7 bits (61), Expect = 0.072
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 50 VLPFQQGHQ*NQYLPSSTMS-VDKEELVQRAKLAEQAERYDDMACRDEGSD 199
+ P QQ H LP T + D E+++ +QAE Y DM+C + GSD
Sbjct: 638 IQPKQQQH--GTGLPLRTQNKTDAEKILSHVHALKQAEGYIDMSCAN-GSD 685
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 25.0 bits (52), Expect = 0.89
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 156 LNDMMTWRAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQ 311
L D ++W +KEVTE ++++ LL +N R S ++++S+ +
Sbjct: 737 LQDKLSWLPHVKEVTERAGKIADATSRLL----RNHSEPRASKAKLLASVSE 784
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 23.8 bits (49), Expect = 2.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -3
Query: 285 MMTVGRRPHFYKQRKEGFFLRC*ARRRFPSLPSSRHAMSSYRSACSANLAR 133
+ V RR +QR+E +C R PS+PSS S R+ A +AR
Sbjct: 1053 LRNVARRTQTVRQREE----QCGER---PSMPSSSPRTSERRANIRARMAR 1096
>Z69977-1|CAA93817.1| 151|Anopheles gambiae ribosomal protein RS11
protein.
Length = 151
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 304 LNRKPKGRKENMRWQKNIGL 363
LNRK RK+ +R +IGL
Sbjct: 18 LNRKNVSRKKGLRMHHSIGL 37
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 152 QAERYDDMACRDEGSDGNRRRAQQRRKK 235
+A+R + R+E + NRR A RR++
Sbjct: 1097 EAQRAEVRRARNERRNANRRAATARRRE 1124
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -1
Query: 158 QPAQPTWRVVLVPPYR 111
+P +P W V +PP+R
Sbjct: 78 RPGRPWWSVPGIPPFR 93
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 22.6 bits (46), Expect = 4.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 210 RRFPSLPSSRHAMSSYRSACSANLARCTSSS 118
RR PS+P+S ++ + +A LA T +S
Sbjct: 1161 RRSPSIPNSNAGAATPTATTAAPLAPTTGNS 1191
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 22.2 bits (45), Expect = 6.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 335 FSFRPFGFLFNRG 297
FS +PFG +N+G
Sbjct: 121 FSSKPFGIYYNKG 133
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 22.2 bits (45), Expect = 6.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 335 FSFRPFGFLFNRG 297
FS +PFG +N+G
Sbjct: 121 FSSKPFGIYYNKG 133
>AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR
protein.
Length = 640
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1
Query: 365 FNPIFFCHLMFSFRPFGFL 309
+NPI +C++ FR GF+
Sbjct: 562 YNPIIYCYMNARFRS-GFI 579
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 21.8 bits (44), Expect = 8.3
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +2
Query: 92 PSSTMSVDKEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQRRKKPSFRCL*KCGRR 271
PS + +++ Q ++L E +++ G + N +R+KK S + K +R
Sbjct: 58 PSGLQRLQQQQQ-QPSRLTPVREAVENIPSPRNGPNINEGSINKRKKKKSKKKQNKPRKR 116
Query: 272 PTVIMAS 292
P ++ S
Sbjct: 117 PEALLIS 123
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,203
Number of Sequences: 2352
Number of extensions: 6897
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27514560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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