Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I19
(365 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 111 1e-25
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 111 1e-25
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 110 3e-25
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 110 3e-25
AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical ... 29 0.77
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 28 1.8
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 28 1.8
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 1.8
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 1.8
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 1.8
Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical p... 27 3.1
Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical pr... 27 3.1
AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical ... 27 3.1
AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA bind... 27 3.1
AF040645-1|AAB94973.1| 377|Caenorhabditis elegans Hypothetical ... 27 3.1
AF024492-6|AAF98616.1| 277|Caenorhabditis elegans Hypothetical ... 27 3.1
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 27 3.1
AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine re... 27 4.1
Z70684-6|CAA94595.1| 230|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical pr... 27 5.4
U39645-3|AAA80362.3| 439|Caenorhabditis elegans Gustatory recep... 27 5.4
AF387605-1|AAK70488.1| 427|Caenorhabditis elegans putative chem... 27 5.4
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 26 7.2
AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacti... 26 7.2
Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical pr... 26 9.5
AC006618-3|AAK68251.3| 960|Caenorhabditis elegans Patched relat... 26 9.5
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 111 bits (268), Expect = 1e-25
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 180 AAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKHEMAEEYR 359
AAMK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+K ++A+EYR
Sbjct: 26 AAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYR 85
Query: 360 VK 365
VK
Sbjct: 86 VK 87
Score = 44.4 bits (100), Expect = 3e-05
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 104 MSVDKEELVQRAKLAEQAERYDDMA 178
MS EELVQRAKLAEQAERYDDMA
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMA 25
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 111 bits (268), Expect = 1e-25
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 180 AAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKHEMAEEYR 359
AAMK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+K ++A+EYR
Sbjct: 26 AAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYR 85
Query: 360 VK 365
VK
Sbjct: 86 VK 87
Score = 44.4 bits (100), Expect = 3e-05
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 104 MSVDKEELVQRAKLAEQAERYDDMA 178
MS EELVQRAKLAEQAERYDDMA
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMA 25
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 110 bits (264), Expect = 3e-25
Identities = 53/62 (85%), Positives = 58/62 (93%)
Frame = +3
Query: 180 AAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKHEMAEEYR 359
A+MK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+K +MA+EYR
Sbjct: 26 ASMKKVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYR 85
Query: 360 VK 365
K
Sbjct: 86 EK 87
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 104 MSVDKEELVQRAKLAEQAERYDDMA 178
MS KEELV RAKLAEQAERYDDMA
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMA 25
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 110 bits (264), Expect = 3e-25
Identities = 53/62 (85%), Positives = 58/62 (93%)
Frame = +3
Query: 180 AAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKHEMAEEYR 359
A+MK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+K +MA+EYR
Sbjct: 26 ASMKKVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYR 85
Query: 360 VK 365
K
Sbjct: 86 EK 87
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 104 MSVDKEELVQRAKLAEQAERYDDMA 178
MS KEELV RAKLAEQAERYDDMA
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMA 25
>AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical
protein F57B10.9 protein.
Length = 476
Score = 29.5 bits (63), Expect = 0.77
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
Frame = +3
Query: 189 KEVTETGVELSNEERNLLSVAYKN--VVGARRSSW-------RVISSIEQKTE 320
KE E ELS EE+N +S N + G ++ +W RVIS +E E
Sbjct: 237 KEQAEPSTELSKEEKNRISTTISNFLIKGGQKIAWGVETTTVRVISRVEDNGE 289
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1425 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1470
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1437 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1482
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1324 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1369
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1406 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1451
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1425 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1470
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1437 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1482
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1324 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1369
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1406 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1451
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 98 STMSVDKEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQRRKKP 238
S+ +KE + +R + ++AER+ D + ++ D RR+ ++P
Sbjct: 747 SSKKKEKENIGRRDRGDKRAERHRDQSVENKDKDRRRRQDSDENRRP 793
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 98 STMSVDKEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQRRKKP 238
S+ +KE + +R + ++AER+ D + ++ D RR+ ++P
Sbjct: 747 SSKKKEKENIGRRDRGDKRAERHRDQSVENKDKDRRRRQDSDENRRP 793
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1437 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1482
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1437 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1482
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 116 KEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQ---RRKKPSF 244
+EE +R + AE +R D R + RRR ++ RRKKP F
Sbjct: 1437 REEEERRRREAEDRKRRQDEEDRRRREEEERRRREEEEKRRKKPDF 1482
>Z81128-10|CAB03395.3| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 152 QAERYDDMACRDEGSDGNRRRAQQRRKKPSF 244
+ E+ + + + DGNRR A RR PSF
Sbjct: 271 EKEKLSNQSDLQQAIDGNRREAPGRRTAPSF 301
>Z81033-3|CAD36479.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 152 QAERYDDMACRDEGSDGNRRRAQQRRKKPSF 244
+ E+ + + + DGNRR A RR PSF
Sbjct: 271 EKEKLSNQSDLQQAIDGNRREAPGRRTAPSF 301
>Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical
protein ZK1128.2b protein.
Length = 464
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 255 KNVVGARRSSWRVISSIEQKTEGSERKHEMAEE 353
KNV+GAR+ +W+ I+ T+G E+ +A E
Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHE 127
>AL023824-1|CAD36497.1| 467|Caenorhabditis elegans Hypothetical
protein T23D8.8 protein.
Length = 467
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 152 QAERYDDMACRDEGSDGNRRRAQQRRKKPSF 244
+ E+ + + + DGNRR A RR PSF
Sbjct: 271 EKEKLSNQSDLQQAIDGNRREAPGRRTAPSF 301
>AF487547-1|AAL93258.1| 467|Caenorhabditis elegans ARID DNA binding
protein CFI-1 protein.
Length = 467
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 152 QAERYDDMACRDEGSDGNRRRAQQRRKKPSF 244
+ E+ + + + DGNRR A RR PSF
Sbjct: 271 EKEKLSNQSDLQQAIDGNRREAPGRRTAPSF 301
>AF040645-1|AAB94973.1| 377|Caenorhabditis elegans Hypothetical
protein F52C6.5 protein.
Length = 377
Score = 27.5 bits (58), Expect = 3.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 141 SWLSRLNDMMTWRAAMKEVTETGVELSNE 227
+W SR ND + A+++ + TG+E N+
Sbjct: 321 NWASRCNDEFVFEASVRILNTTGIEDEND 349
>AF024492-6|AAF98616.1| 277|Caenorhabditis elegans Hypothetical
protein F14F9.2 protein.
Length = 277
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 236 VSFFVAELDAGFRHFLHRGTPCHHIVQPAQP 144
+S FV L A RH H TP H+ A P
Sbjct: 11 LSVFVVGLSAAPRHHKHHSTPSVHLKTDAPP 41
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 174 WRAAMKEVTETGVELSNEERNLLSVA 251
W TE G ELSN ERN + VA
Sbjct: 111 WARHKLTFTEDGAELSNRERNRMLVA 136
>AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine
receptor, class w protein95 protein.
Length = 363
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 74 DALVGRVKQVIN*QIAKLFRFF 9
D LVG+V Q+IN I+KLF F
Sbjct: 226 DGLVGKVYQLINGTISKLFPCF 247
>Z70684-6|CAA94595.1| 230|Caenorhabditis elegans Hypothetical
protein F28D1.6 protein.
Length = 230
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 107 SVDKEELVQRAKLAEQAERYDDMACRDEGSDGNRRRAQQRRKKPS 241
+ +KE+ + KL + E YD+ + GSD + +KPS
Sbjct: 99 ATEKEKEKKETKLTKSEEEYDETQSKITGSDIDSMFGDHDTEKPS 143
>Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical
protein F55G7.2 protein.
Length = 383
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 198 SLPSSRHAMSSYRSACSANLARCTSSSLS 112
S+ S RHAMS + S ++ R T S++S
Sbjct: 300 SVASRRHAMSDFGSMSNSRTLRATESNVS 328
>U39645-3|AAA80362.3| 439|Caenorhabditis elegans Gustatory receptor
family protein 2 protein.
Length = 439
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 24 FCNLLVNYLFYPSNKGISEINIFHRPRCPSIRRN 125
FC LL +Y + S IS + I C IRR+
Sbjct: 209 FCVLLDSYALFVSRAAISALAILFYQHCSVIRRS 242
>AF387605-1|AAK70488.1| 427|Caenorhabditis elegans putative
chemoreceptor GUR-2 protein.
Length = 427
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 24 FCNLLVNYLFYPSNKGISEINIFHRPRCPSIRRN 125
FC LL +Y + S IS + I C IRR+
Sbjct: 197 FCVLLDSYALFVSRAAISALAILFYQHCSVIRRS 230
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 201 ETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKHEMAEEYRVK 365
+ VELSN+ N + Y V + ++ +S E+KT +E + + EY VK
Sbjct: 97 DVDVELSNDVSNENPIVYYQKVASSTTNPVYNNSSEEKTHSAENQDNI--EYGVK 149
>AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacting
protein (scaffoldprotein) protein 1 protein.
Length = 998
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 167 DDMACRDEGSDGNRRRAQQRR 229
+D ++G +GNRRR QQR+
Sbjct: 734 EDSYYEEDGINGNRRRRQQRK 754
>Z81509-7|CAJ85751.1| 544|Caenorhabditis elegans Hypothetical
protein F21A3.2b protein.
Length = 544
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 168 MTWRAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSI 305
MT+ +K + E G ++S+ E ++ + G + S WR I +
Sbjct: 114 MTYDDTLKSIVEYGTDISDLEHSVEGRCAVFLDGQKHSVWRYIHRV 159
>Z81509-6|CAB04153.2| 431|Caenorhabditis elegans Hypothetical
protein F21A3.2a protein.
Length = 431
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 168 MTWRAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSI 305
MT+ +K + E G ++S+ E ++ + G + S WR I +
Sbjct: 1 MTYDDTLKSIVEYGTDISDLEHSVEGRCAVFLDGQKHSVWRYIHRV 46
>AC006618-3|AAK68251.3| 960|Caenorhabditis elegans Patched related
family protein 4 protein.
Length = 960
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 111 SIRRN*YNAPSWLSRLNDMMTWRAAMKEVTETGVELS 221
S + + Y SW R +++ WR +KE E + LS
Sbjct: 732 SFQTSFYGLDSWDKRQSELFYWRDILKEFPEFDMFLS 768
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,758,289
Number of Sequences: 27780
Number of extensions: 176670
Number of successful extensions: 601
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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