Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I17
(341 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 106 9e-24
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 106 9e-24
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 106 9e-24
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 106 9e-24
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 106 9e-24
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 106 9e-24
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 106 9e-24
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 102 1e-22
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 48 3e-06
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 48 3e-06
U19269-5|AAC46510.1| 1065|Drosophila melanogaster Dachshund vari... 27 8.4
U19269-4|AAC46509.1| 1072|Drosophila melanogaster Dachshund vari... 27 8.4
U19269-3|AAC46508.1| 1072|Drosophila melanogaster Dachshund vari... 27 8.4
U19269-2|AAC46507.1| 1074|Drosophila melanogaster Dachshund vari... 27 8.4
U19269-1|AAC46506.1| 1081|Drosophila melanogaster Dachshund prot... 27 8.4
AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC... 27 8.4
AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB... 27 8.4
AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA... 27 8.4
AE014134-2727|AAN10945.1| 1081|Drosophila melanogaster CG4952-PE... 27 8.4
AE014134-2726|AAN10944.1| 1081|Drosophila melanogaster CG4952-PB... 27 8.4
AE014134-2725|AAN10943.1| 1074|Drosophila melanogaster CG4952-PD... 27 8.4
AE014134-2724|AAX52668.1| 1072|Drosophila melanogaster CG4952-PF... 27 8.4
AE014134-2723|AAF53538.3| 1072|Drosophila melanogaster CG4952-PA... 27 8.4
AE014134-2722|AAN10942.1| 1065|Drosophila melanogaster CG4952-PC... 27 8.4
AE014134-2721|AAX52667.1| 1063|Drosophila melanogaster CG4952-PG... 27 8.4
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 106 bits (254), Expect = 9e-24
Identities = 51/69 (73%), Positives = 55/69 (79%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRRVTTSR 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR +
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGG-NDKQ 59
Query: 198 ASLMKQGVL 224
MKQGVL
Sbjct: 60 GFPMKQGVL 68
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 172 VAGG*RQAGLPL*NRESLTNSRVRLLMSKGHSCYRPRR 285
+AGG + G P+ + LT+ RVRLL+ KGHSCYRPRR
Sbjct: 52 IAGGNDKQGFPM-KQGVLTHGRVRLLLKKGHSCYRPRR 88
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 106 bits (254), Expect = 9e-24
Identities = 51/69 (73%), Positives = 55/69 (79%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRRVTTSR 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR +
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGG-NDKQ 59
Query: 198 ASLMKQGVL 224
MKQGVL
Sbjct: 60 GFPMKQGVL 68
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 172 VAGG*RQAGLPL*NRESLTNSRVRLLMSKGHSCYRPRR 285
+AGG + G P+ + LT+ RVRLL+ KGHSCYRPRR
Sbjct: 52 IAGGNDKQGFPM-KQGVLTHGRVRLLLKKGHSCYRPRR 88
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 106 bits (254), Expect = 9e-24
Identities = 51/69 (73%), Positives = 55/69 (79%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRRVTTSR 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR +
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGG-NDKQ 59
Query: 198 ASLMKQGVL 224
MKQGVL
Sbjct: 60 GFPMKQGVL 68
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 172 VAGG*RQAGLPL*NRESLTNSRVRLLMSKGHSCYRPRR 285
+AGG + G P+ + LT+ RVRLL+ KGHSCYRPRR
Sbjct: 52 IAGGNDKQGFPM-KQGVLTHGRVRLLLKKGHSCYRPRR 88
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 106 bits (254), Expect = 9e-24
Identities = 51/69 (73%), Positives = 55/69 (79%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRRVTTSR 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR +
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGG-NDKQ 59
Query: 198 ASLMKQGVL 224
MKQGVL
Sbjct: 60 GFPMKQGVL 68
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 172 VAGG*RQAGLPL*NRESLTNSRVRLLMSKGHSCYRPR 282
+AGG + G P+ + LT+ R+RLL K HSC+ PR
Sbjct: 52 IAGGNDKQGFPM-KQGVLTHGRLRLL-KKIHSCFHPR 86
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 106 bits (254), Expect = 9e-24
Identities = 51/69 (73%), Positives = 55/69 (79%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRRVTTSR 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR +
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGG-NDKQ 59
Query: 198 ASLMKQGVL 224
MKQGVL
Sbjct: 60 GFPMKQGVL 68
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 172 VAGG*RQAGLPL*NRESLTNSRVRLLMSKGHSCYRPR 282
+AGG + G P+ + LT+ R+RLL K HSC+ PR
Sbjct: 52 IAGGNDKQGFPM-KQGVLTHGRLRLL-KKIHSCFHPR 86
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 106 bits (254), Expect = 9e-24
Identities = 51/69 (73%), Positives = 55/69 (79%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRRVTTSR 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR +
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGG-NDKQ 59
Query: 198 ASLMKQGVL 224
MKQGVL
Sbjct: 60 GFPMKQGVL 68
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 172 VAGG*RQAGLPL*NRESLTNSRVRLLMSKGHSCYRPRR 285
+AGG + G P+ + LT+ RVRLL+ KGHSCYRPRR
Sbjct: 52 IAGGNDKQGFPM-KQGVLTHGRVRLLLKKGHSCYRPRR 88
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 106 bits (254), Expect = 9e-24
Identities = 51/69 (73%), Positives = 55/69 (79%)
Frame = +3
Query: 18 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRRVTTSR 197
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR +
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGG-NDKQ 59
Query: 198 ASLMKQGVL 224
MKQGVL
Sbjct: 60 GFPMKQGVL 68
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 172 VAGG*RQAGLPL*NRESLTNSRVRLLMSKGHSCYRPRR 285
+AGG + G P+ + LT+ RVRLL+ KGHSCYRPRR
Sbjct: 52 IAGGNDKQGFPM-KQGVLTHGRVRLLLKKGHSCYRPRR 88
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 102 bits (244), Expect = 1e-22
Identities = 49/67 (73%), Positives = 53/67 (79%)
Frame = +3
Query: 24 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRRVTTSRAS 203
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR +
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGG-NDKQGF 64
Query: 204 LMKQGVL 224
MKQGVL
Sbjct: 65 PMKQGVL 71
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 172 VAGG*RQAGLPL*NRESLTNSRVRLLMSKGHSCYRPRR 285
+AGG + G P+ + LT+ RVRLL+ KGHSCYRPRR
Sbjct: 55 IAGGNDKQGFPM-KQGVLTHGRVRLLLKKGHSCYRPRR 91
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 172 VAGG*RQAGLPL*NRESLTNSRVRLLMSKGHSCYRPRR 285
+AGG + G P+ + LT+ RVRLL+ KGHSCYRPRR
Sbjct: 21 IAGGNDKQGFPM-KQGVLTHGRVRLLLKKGHSCYRPRR 57
Score = 40.7 bits (91), Expect = 5e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3
Query: 111 MGAEVDADLLGDEWKGYVLRCCRRVTTSRASLMKQGVL 224
MG V+AD+LGDEWKGY LR + MKQGVL
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGG-NDKQGFPMKQGVL 37
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 48.0 bits (109), Expect = 3e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 172 VAGG*RQAGLPL*NRESLTNSRVRLLMSKGHSCYRPRR 285
+AGG + G P+ + LT+ RVRLL+ KGHSCYRPRR
Sbjct: 21 IAGGNDKQGFPM-KQGVLTHGRVRLLLKKGHSCYRPRR 57
Score = 40.7 bits (91), Expect = 5e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3
Query: 111 MGAEVDADLLGDEWKGYVLRCCRRVTTSRASLMKQGVL 224
MG V+AD+LGDEWKGY LR + MKQGVL
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGG-NDKQGFPMKQGVL 37
>U19269-5|AAC46510.1| 1065|Drosophila melanogaster Dachshund variant
4 protein.
Length = 1065
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 782 QLVDERKLRVLYQKRFRRE 800
>U19269-4|AAC46509.1| 1072|Drosophila melanogaster Dachshund variant
3 protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>U19269-3|AAC46508.1| 1072|Drosophila melanogaster Dachshund variant
2 protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>U19269-2|AAC46507.1| 1074|Drosophila melanogaster Dachshund variant
1 protein.
Length = 1074
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 791 QLVDERKLRVLYQKRFRRE 809
>U19269-1|AAC46506.1| 1081|Drosophila melanogaster Dachshund
protein.
Length = 1081
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 798 QLVDERKLRVLYQKRFRRE 816
>AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC,
isoform C protein.
Length = 1570
Score = 26.6 bits (56), Expect = 8.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 221 DSLFHKGSPACRYPPATPENI 159
D ++ + +PA PPA PEN+
Sbjct: 336 DEVWEEAAPAAPLPPAPPENV 356
>AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB,
isoform B protein.
Length = 1570
Score = 26.6 bits (56), Expect = 8.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 221 DSLFHKGSPACRYPPATPENI 159
D ++ + +PA PPA PEN+
Sbjct: 336 DEVWEEAAPAAPLPPAPPENV 356
>AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA,
isoform A protein.
Length = 1570
Score = 26.6 bits (56), Expect = 8.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 221 DSLFHKGSPACRYPPATPENI 159
D ++ + +PA PPA PEN+
Sbjct: 336 DEVWEEAAPAAPLPPAPPENV 356
>AE014134-2727|AAN10945.1| 1081|Drosophila melanogaster CG4952-PE,
isoform E protein.
Length = 1081
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 798 QLVDERKLRVLYQKRFRRE 816
>AE014134-2726|AAN10944.1| 1081|Drosophila melanogaster CG4952-PB,
isoform B protein.
Length = 1081
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 798 QLVDERKLRVLYQKRFRRE 816
>AE014134-2725|AAN10943.1| 1074|Drosophila melanogaster CG4952-PD,
isoform D protein.
Length = 1074
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 791 QLVDERKLRVLYQKRFRRE 809
>AE014134-2724|AAX52668.1| 1072|Drosophila melanogaster CG4952-PF,
isoform F protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>AE014134-2723|AAF53538.3| 1072|Drosophila melanogaster CG4952-PA,
isoform A protein.
Length = 1072
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 789 QLVDERKLRVLYQKRFRRE 807
>AE014134-2722|AAN10942.1| 1065|Drosophila melanogaster CG4952-PC,
isoform C protein.
Length = 1065
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 782 QLVDERKLRVLYQKRFRRE 800
>AE014134-2721|AAX52667.1| 1063|Drosophila melanogaster CG4952-PG,
isoform G protein.
Length = 1063
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 66 EVVDEHKLRIFYEKRMGAE 122
++VDE KLR+ Y+KR E
Sbjct: 780 QLVDERKLRVLYQKRFRRE 798
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,453,367
Number of Sequences: 53049
Number of extensions: 306767
Number of successful extensions: 678
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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