Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I16
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 214 3e-56
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 214 3e-56
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 115 3e-26
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 115 3e-26
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 115 3e-26
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 112 2e-25
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 112 2e-25
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 91 7e-19
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 91 7e-19
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 88 4e-18
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 88 4e-18
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 88 4e-18
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 79 2e-15
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 79 2e-15
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 78 5e-15
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 69 3e-12
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 31 0.44
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 31 0.44
Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC024776-7|AAK68469.1| 411|Caenorhabditis elegans Nuclear pore ... 27 9.5
AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore ... 27 9.5
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 214 bits (523), Expect = 3e-56
Identities = 103/178 (57%), Positives = 133/178 (74%)
Frame = +1
Query: 37 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 216
M++I LNPKAELAR + AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 217 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIIT 396
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ V EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 397 EGYDIARNKALEILDSMKIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLS 570
EG++ A K LE+L+ K ++R+ L+++ T+L+TK+H LA +T+ VDAVL+
Sbjct: 121 EGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLA 178
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 214 bits (523), Expect = 3e-56
Identities = 103/178 (57%), Positives = 133/178 (74%)
Frame = +1
Query: 37 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDG 216
M++I LNPKAELAR + AL +NIS A+G+QDVM++NLGPKGT+KMLVSGAGDIK+TKDG
Sbjct: 1 MSSIQCLNPKAELARHAAALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDG 60
Query: 217 NVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIIT 396
NVLLHEM IQHPTAS+IA+ VLLIGELLKQA+ V EGLHPRI+T
Sbjct: 61 NVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVT 120
Query: 397 EGYDIARNKALEILDSMKIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLS 570
EG++ A K LE+L+ K ++R+ L+++ T+L+TK+H LA +T+ VDAVL+
Sbjct: 121 EGFEWANTKTLELLEKFKKEAPVERDLLVEVCRTALRTKLHQKLADHITECVVDAVLA 178
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 115 bits (276), Expect = 3e-26
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Frame = +1
Query: 88 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 267
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 268 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSM 447
V+L G LL++A+ + G+HP I +G+D+A KALE LDS+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 448 --KIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLS 570
K P+E RE L++ A TSL +K+ + VDAVLS
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLS 194
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 115 bits (276), Expect = 3e-26
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Frame = +1
Query: 88 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 267
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 268 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSM 447
V+L G LL++A+ + G+HP I +G+D+A KALE LDS+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 448 --KIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLS 570
K P+E RE L++ A TSL +K+ + VDAVLS
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLS 194
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 115 bits (276), Expect = 3e-26
Identities = 62/163 (38%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
Frame = +1
Query: 88 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 267
+A+ +I AA+ + + ++T+LGP+G KMLVS GD+ IT DG ++ +M +QH A L+
Sbjct: 33 EAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLM 92
Query: 268 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSM 447
V+L G LL++A+ + G+HP I +G+D+A KALE LDS+
Sbjct: 93 VELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSI 152
Query: 448 --KIPIEIKRENLLDIASTSLKTKVHASLATVLTDACVDAVLS 570
K P+E RE L++ A TSL +K+ + VDAVLS
Sbjct: 153 SDKFPVE-NRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLS 194
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 112 bits (269), Expect = 2e-25
Identities = 57/155 (36%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
Frame = +1
Query: 103 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 282
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 283 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSMKIPIE 462
V++ G LL A +S+G+HP I+E + A +A +ILD M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 463 IKRENLLD-IASTSLKTKVHASLATVLTDACVDAV 564
+ + LL+ +A+TSL +KV + + +L V+AV
Sbjct: 156 LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAV 190
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 112 bits (269), Expect = 2e-25
Identities = 57/155 (36%), Positives = 91/155 (58%), Gaps = 1/155 (0%)
Frame = +1
Query: 103 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 282
NI AAK + D ++T+LGP+G KM+ SG GD+ IT DG +L++M + HPTA ++
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 283 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSMKIPIE 462
V++ G LL A +S+G+HP I+E + A +A +ILD M P++
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVD 155
Query: 463 IKRENLLD-IASTSLKTKVHASLATVLTDACVDAV 564
+ + LL+ +A+TSL +KV + + +L V+AV
Sbjct: 156 LSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAV 190
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 90.6 bits (215), Expect = 7e-19
Identities = 47/155 (30%), Positives = 86/155 (55%), Gaps = 2/155 (1%)
Frame = +1
Query: 103 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 282
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 283 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALE-ILDSMKIPI 459
V++ ELLK+AD V + +HP I GY +A +A++ I +++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 460 E-IKRENLLDIASTSLKTKVHASLATVLTDACVDA 561
+ I R+++++ A TS+ +K+ A + VDA
Sbjct: 145 DSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDA 179
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 90.6 bits (215), Expect = 7e-19
Identities = 47/155 (30%), Positives = 86/155 (55%), Gaps = 2/155 (1%)
Frame = +1
Query: 103 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 282
N++AA I +++K++LGP G KMLV GD+ +T DG +L +++++HP ++
Sbjct: 25 NVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQ 84
Query: 283 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALE-ILDSMKIPI 459
V++ ELLK+AD V + +HP I GY +A +A++ I +++
Sbjct: 85 LQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTS 144
Query: 460 E-IKRENLLDIASTSLKTKVHASLATVLTDACVDA 561
+ I R+++++ A TS+ +K+ A + VDA
Sbjct: 145 DSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDA 179
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 88.2 bits (209), Expect = 4e-18
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Frame = +1
Query: 37 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 204
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 205 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHP 384
T DG +L + + +P A ++ +L ELLK+A+ V++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 385 RIITEGYDIARNKALEILDSMKIPI-EIKRENLLDIASTSLKTKVHASLATVLTDACVDA 561
+ I GY A A E L I + R++LL IA T+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 562 VL 567
VL
Sbjct: 181 VL 182
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 88.2 bits (209), Expect = 4e-18
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Frame = +1
Query: 37 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 204
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 205 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHP 384
T DG +L + + +P A ++ +L ELLK+A+ V++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 385 RIITEGYDIARNKALEILDSMKIPI-EIKRENLLDIASTSLKTKVHASLATVLTDACVDA 561
+ I GY A A E L I + R++LL IA T+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 562 VL 567
VL
Sbjct: 181 VL 182
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 88.2 bits (209), Expect = 4e-18
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Frame = +1
Query: 37 MAAISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSG----AGDIKI 204
M + +L A+ R A + A I D++K+ LGPKG K+L+SG AG IK+
Sbjct: 1 MLPVQILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 205 TKDGNVLLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHP 384
T DG +L + + +P A ++ +L ELLK+A+ V++ +HP
Sbjct: 61 TNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHP 120
Query: 385 RIITEGYDIARNKALEILDSMKIPI-EIKRENLLDIASTSLKTKVHASLATVLTDACVDA 561
+ I GY A A E L I + R++LL IA T+L +K+ + VDA
Sbjct: 121 QTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDA 180
Query: 562 VL 567
VL
Sbjct: 181 VL 182
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 79.4 bits (187), Expect = 2e-15
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Frame = +1
Query: 46 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 225
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 226 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 405
L + I P AS + V+L E+LKQ ++ +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 406 DIARNKALEILDSMKIPIEIK---RENLLDIASTSLKTKVHASLATVLTDACVDAV 564
A K L+ L ++I I + RE L+ A+T+L +K+ + + VDAV
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAV 181
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 79.4 bits (187), Expect = 2e-15
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Frame = +1
Query: 46 ISLLNPKAELARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 225
I LL E + + NI+A + + D ++T LGP+G K++V G I+ DG +
Sbjct: 6 IILLKDGTENKQGKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATI 65
Query: 226 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 405
L + I P AS + V+L E+LKQ ++ +G+HP+++
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 406 DIARNKALEILDSMKIPIEIK---RENLLDIASTSLKTKVHASLATVLTDACVDAV 564
A K L+ L ++I I + RE L+ A+T+L +K+ + + VDAV
Sbjct: 126 GKACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDAV 181
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 77.8 bits (183), Expect = 5e-15
Identities = 34/101 (33%), Positives = 55/101 (54%)
Frame = +1
Query: 103 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 282
NI+A K I DV++T+LGP+ +KML+ G I +T DGN +L E+ ++HP A +
Sbjct: 28 NINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHPAAKSMIEIAR 87
Query: 283 XXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGY 405
++L GE++ A Y+ + HP +I + Y
Sbjct: 88 TQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAY 128
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 68.5 bits (160), Expect = 3e-12
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Frame = +1
Query: 88 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 267
+A+ NI A + +++ GP G KM+++ + +T D +L E++IQHP A +I
Sbjct: 26 EAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARII 85
Query: 268 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSM 447
V+L LL+ A + G+ P+ + GY+ A KALEIL ++
Sbjct: 86 IMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTL 145
Query: 448 KIPIEIKRENLLDI------ASTSLKTKVHASLATVLTDACV 555
+ +N+ ++ A TS + +A ++ ACV
Sbjct: 146 VVKEATDMKNIEEVRQYIRSAITSKQYDNEDIIADLVAKACV 187
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 76 ARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 255
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 256 ASLIAR 273
+L A+
Sbjct: 82 QNLGAK 87
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +1
Query: 76 ARASQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT 255
A QA+ V ++ + D + +GPKG ++ G KITKDG + + ++
Sbjct: 25 AEGRQAMLVGVNL---LADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKY 81
Query: 256 ASLIAR 273
+L A+
Sbjct: 82 QNLGAK 87
>Z81487-4|CAB03998.2| 420|Caenorhabditis elegans Hypothetical
protein C54E10.5 protein.
Length = 420
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 337 ELLKQADIYVSEGLHPRIITEGYDIARNKALEILDSMKIPIEIKRENLLDIA 492
E+ Y E + Y K ++I++ M + I++KREN +DIA
Sbjct: 352 EISNNLHSYYEEAARKEENPKNYASRLTKMMQIVNEM-LSIQLKRENTMDIA 402
>AC024776-7|AAK68469.1| 411|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform a protein.
Length = 411
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 82 ASQALAVNISA--AKGIQDVMKTNLGPKGTMKM 174
ASQ+ A+N+ A AKG++ + GP+ TM M
Sbjct: 322 ASQSAALNLVATTAKGVRLYFSVSTGPQSTMAM 354
>AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform b protein.
Length = 1090
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 82 ASQALAVNISA--AKGIQDVMKTNLGPKGTMKM 174
ASQ+ A+N+ A AKG++ + GP+ TM M
Sbjct: 237 ASQSAALNLVATTAKGVRLYFSVSTGPQSTMAM 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,581,240
Number of Sequences: 27780
Number of extensions: 215257
Number of successful extensions: 548
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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