BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I15
(392 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095056-1|AAM11384.1| 1062|Drosophila melanogaster LD45403p pro... 29 1.7
AE014134-3113|AAN11045.1| 1062|Drosophila melanogaster CG10084-P... 29 1.7
AE014134-3112|AAF53812.1| 1062|Drosophila melanogaster CG10084-P... 29 1.7
BT029029-1|ABJ16962.1| 310|Drosophila melanogaster IP01723p pro... 28 3.8
AF152361-1|AAF00151.1| 310|Drosophila melanogaster Kua protein ... 28 3.8
AE014134-3208|AAF53878.1| 310|Drosophila melanogaster CG10723-P... 28 3.8
>AY095056-1|AAM11384.1| 1062|Drosophila melanogaster LD45403p
protein.
Length = 1062
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 210 QVMALPLPIPPCAKRDGLSGLGCERFEYASTMATTLLAPVKTEREILEHSMSEDDPNANT 389
Q +P+P+ A G++ +G RFE T+A +A V T+R++ +S N N
Sbjct: 500 QRQLIPIPVVDGAPTGGVAEVGKRRFELEDTVA---IADVPTKRKVPINSRLGPRVNPNM 556
Query: 390 Q 392
Q
Sbjct: 557 Q 557
>AE014134-3113|AAN11045.1| 1062|Drosophila melanogaster CG10084-PB,
isoform B protein.
Length = 1062
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 210 QVMALPLPIPPCAKRDGLSGLGCERFEYASTMATTLLAPVKTEREILEHSMSEDDPNANT 389
Q +P+P+ A G++ +G RFE T+A +A V T+R++ +S N N
Sbjct: 500 QRQLIPIPVVDGAPTGGVAEVGKRRFELEDTVA---IADVPTKRKVPINSRLGPRVNPNM 556
Query: 390 Q 392
Q
Sbjct: 557 Q 557
>AE014134-3112|AAF53812.1| 1062|Drosophila melanogaster CG10084-PA,
isoform A protein.
Length = 1062
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 210 QVMALPLPIPPCAKRDGLSGLGCERFEYASTMATTLLAPVKTEREILEHSMSEDDPNANT 389
Q +P+P+ A G++ +G RFE T+A +A V T+R++ +S N N
Sbjct: 500 QRQLIPIPVVDGAPTGGVAEVGKRRFELEDTVA---IADVPTKRKVPINSRLGPRVNPNM 556
Query: 390 Q 392
Q
Sbjct: 557 Q 557
>BT029029-1|ABJ16962.1| 310|Drosophila melanogaster IP01723p
protein.
Length = 310
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 330 KTEREILEHSMSEDDPNAN 386
K++ +IL +SM EDDPN N
Sbjct: 4 KSDMDILANSMYEDDPNGN 22
>AF152361-1|AAF00151.1| 310|Drosophila melanogaster Kua protein
protein.
Length = 310
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 330 KTEREILEHSMSEDDPNAN 386
K++ +IL +SM EDDPN N
Sbjct: 4 KSDMDILANSMYEDDPNGN 22
>AE014134-3208|AAF53878.1| 310|Drosophila melanogaster CG10723-PA
protein.
Length = 310
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 330 KTEREILEHSMSEDDPNAN 386
K++ +IL +SM EDDPN N
Sbjct: 4 KSDMDILANSMYEDDPNGN 22
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,667,338
Number of Sequences: 53049
Number of extensions: 321668
Number of successful extensions: 827
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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