Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I15
(392 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 1.7
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 22 2.2
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 22 2.2
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 2.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 2.9
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 22 2.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 3.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 3.8
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 6.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 20 8.8
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 20 8.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 20 8.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 20 8.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 20 8.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 20 8.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 20 8.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 20 8.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 20 8.8
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 1.7
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = -3
Query: 102 IDLQPNHIDINNSHFLKKSSLHKITPNNDNNASC 1
+ + +H D NN+ L++ L + N D C
Sbjct: 238 VSIMFSHYDRNNNGNLEREELEQFAENEDLEELC 271
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 22.2 bits (45), Expect = 2.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 303 MATTLLAPVKTEREILEHSMSED 371
M + APV+ E E LEH +E+
Sbjct: 14 MVAIMAAPVEDEFEPLEHFENEE 36
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 22.2 bits (45), Expect = 2.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 303 MATTLLAPVKTEREILEHSMSED 371
M + APV+ E E LEH +E+
Sbjct: 14 MVAIMAAPVEDEFEPLEHFENEE 36
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 2.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPI 236
NYK Y ++I + + +P+P+
Sbjct: 112 NYKKLYKNYIINIEQIPVPVPV 133
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 2.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPI 236
NYK Y ++I + + +P+P+
Sbjct: 112 NYKKLYKNYIINIEQIPVPVPV 133
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.8 bits (44), Expect = 2.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 324 VLTRWLPLY*HIQNVHT 274
+LT L HIQNVHT
Sbjct: 11 ILTSLTRLRRHIQNVHT 27
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 3.8
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +1
Query: 295 LVQWQPPC*HRLKLNVKYLNIPCQRMTLMLTL 390
LV WQPP ++ ++ P T +L L
Sbjct: 140 LVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKL 171
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 3.8
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = +1
Query: 295 LVQWQPPC*HRLKLNVKYLNIPCQRMTLML 384
LV+W+PP ++ + P T +L
Sbjct: 140 LVEWKPPAIYKSSCEIDVEYFPFDEQTCVL 169
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 6.7
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPIP 239
NY ++ L+ + +P+P+P
Sbjct: 102 NYNNYKKLYYNINYIEQIPIPVP 124
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 8.8
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPIP 239
NY ++ L+ + +P+P+P
Sbjct: 102 NYNNYKKLYYNINYIEQIPVPVP 124
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 8.8
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPIP 239
NY ++ L+ + +P+P+P
Sbjct: 102 NYNNYKKLYYNINYIEQIPVPVP 124
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 8.8
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPIP 239
NY ++ L+ + +P+P+P
Sbjct: 102 NYNNYKKLYYNINYIEQIPVPVP 124
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 8.8
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPIP 239
NY ++ L+ + +P+P+P
Sbjct: 102 NYNNYKKLYYNINYIEQIPVPVP 124
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 8.8
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPIP 239
NY ++ L+ + +P+P+P
Sbjct: 102 NYNNYKKLYYNINYIEQIPVPVP 124
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 8.8
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPIP 239
NY ++ L+ + +P+P+P
Sbjct: 102 NYNNYKKLYYNINYIEQIPVPVP 124
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 20.2 bits (40), Expect = 8.8
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPIP 239
NY ++ L+ + +P+P+P
Sbjct: 102 NYNNYKKLYYNINYIEQIPVPVP 124
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.8
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPIP 239
NY ++ L+ + +P+PIP
Sbjct: 100 NYNNYKKLYYNINYIEQVPVPIP 122
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.2 bits (40), Expect = 8.8
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +3
Query: 171 NYKDFYCLFVITKQVMALPLPIP 239
NY ++ L+ + +P+P+P
Sbjct: 110 NYNNYKKLYYNINYIEQIPVPVP 132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,124
Number of Sequences: 438
Number of extensions: 2063
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9638226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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