Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I14
(396 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000573-1|AAH00573.1| 139|Homo sapiens cornichon homolog 4 (Dr... 122 3e-28
AK222634-1|BAD96354.1| 139|Homo sapiens HSPC163 protein variant... 120 2e-27
BC103741-1|AAI03742.1| 144|Homo sapiens cornichon homolog (Dros... 63 3e-10
AY358635-1|AAQ88998.1| 144|Homo sapiens CNIL protein. 63 3e-10
AF104398-1|AAC98388.1| 144|Homo sapiens cornichon protein. 63 3e-10
AF031379-1|AAD32301.1| 134|Homo sapiens cornichon-like protein ... 62 5e-10
BC022780-1|AAH22780.1| 160|Homo sapiens cornichon homolog 3 (Dr... 38 0.009
AL596330-1|CAH73437.1| 160|Homo sapiens cornichon homolog 3 (Dr... 38 0.009
AK096312-1|BAC04760.1| 160|Homo sapiens protein ( Homo sapiens ... 38 0.009
BC047953-1|AAH47953.1| 160|Homo sapiens cornichon homolog 2 (Dr... 36 0.064
AK090988-1|BAC03563.1| 151|Homo sapiens protein ( Homo sapiens ... 29 5.6
BC007230-1|AAH07230.1| 494|Homo sapiens COCH protein protein. 29 7.4
AY916789-1|AAW82432.1| 550|Homo sapiens coagulation factor C ho... 29 7.4
AY358900-1|AAQ89259.1| 550|Homo sapiens COCH protein. 29 7.4
AK130273-1|BAC85316.1| 401|Homo sapiens protein ( Homo sapiens ... 29 7.4
AF006740-1|AAC39545.1| 550|Homo sapiens Coch-5B2 protein. 29 7.4
BC063241-1|AAH63241.1| 322|Homo sapiens sideroflexin 1 protein. 28 9.7
BC020517-1|AAH20517.1| 236|Homo sapiens SFXN1 protein protein. 28 9.7
AK022938-1|BAB14318.1| 236|Homo sapiens protein ( Homo sapiens ... 28 9.7
AK022287-1|BAB14003.1| 242|Homo sapiens protein ( Homo sapiens ... 28 9.7
AF327346-1|AAL56007.1| 322|Homo sapiens tricarboxylate carrier ... 28 9.7
>BC000573-1|AAH00573.1| 139|Homo sapiens cornichon homolog 4
(Drosophila) protein.
Length = 139
Score = 122 bits (295), Expect = 3e-28
Identities = 51/97 (52%), Positives = 71/97 (73%)
Frame = +3
Query: 102 ETLVFALSLIDNGAVLFLLVYYIITLSDLECDYLNSQECCEKLNYWLLPKYIAHSFVTLL 281
E +VF SL+D A++FL VY+IITLSDLECDY+N++ CC KLN W++P+ I H+ VT+L
Sbjct: 2 EAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVL 61
Query: 282 LLLHGQVILMLLNLPMFIWLTFEYFTIPQGNLGVYDP 392
LL+ + LLNLP+ W + Y +P GN+GV+DP
Sbjct: 62 LLMSLHWFIFLLNLPVATWNIYRYIMVPSGNMGVFDP 98
>AK222634-1|BAD96354.1| 139|Homo sapiens HSPC163 protein variant
protein.
Length = 139
Score = 120 bits (288), Expect = 2e-27
Identities = 50/97 (51%), Positives = 70/97 (72%)
Frame = +3
Query: 102 ETLVFALSLIDNGAVLFLLVYYIITLSDLECDYLNSQECCEKLNYWLLPKYIAHSFVTLL 281
E +VF SL+ A++FL VY+IITLSDLECDY+N++ CC KLN W++P+ I H+ VT+L
Sbjct: 2 EAVVFVFSLLGCCALIFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVL 61
Query: 282 LLLHGQVILMLLNLPMFIWLTFEYFTIPQGNLGVYDP 392
LL+ + LLNLP+ W + Y +P GN+GV+DP
Sbjct: 62 LLMSLHWFIFLLNLPVATWNIYRYIMVPSGNMGVFDP 98
>BC103741-1|AAI03742.1| 144|Homo sapiens cornichon homolog
(Drosophila) protein.
Length = 144
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +3
Query: 114 FALSLIDNGAVLFLLVYYIITLSDLECDYLNSQECCEKLNYWLLPKYIAHSFVTLLLLLH 293
+ L+L+ A++F +++II +L+ DY N + C LN +LP+Y+ H+F ++ L
Sbjct: 10 YMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCA 69
Query: 294 GQVILMLLNLPMFIWLTFEYFTIP-QGNLGVYDP 392
+ + + LN+P+ + + Y + P G+YDP
Sbjct: 70 AEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDP 103
>AY358635-1|AAQ88998.1| 144|Homo sapiens CNIL protein.
Length = 144
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +3
Query: 114 FALSLIDNGAVLFLLVYYIITLSDLECDYLNSQECCEKLNYWLLPKYIAHSFVTLLLLLH 293
+ L+L+ A++F +++II +L+ DY N + C LN +LP+Y+ H+F ++ L
Sbjct: 10 YMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCA 69
Query: 294 GQVILMLLNLPMFIWLTFEYFTIP-QGNLGVYDP 392
+ + + LN+P+ + + Y + P G+YDP
Sbjct: 70 AEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDP 103
>AF104398-1|AAC98388.1| 144|Homo sapiens cornichon protein.
Length = 144
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +3
Query: 114 FALSLIDNGAVLFLLVYYIITLSDLECDYLNSQECCEKLNYWLLPKYIAHSFVTLLLLLH 293
+ L+L+ A++F +++II +L+ DY N + C LN +LP+Y+ H+F ++ L
Sbjct: 10 YMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCA 69
Query: 294 GQVILMLLNLPMFIWLTFEYFTIP-QGNLGVYDP 392
+ + + LN+P+ + + Y + P G+YDP
Sbjct: 70 AEWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDP 103
>AF031379-1|AAD32301.1| 134|Homo sapiens cornichon-like protein
protein.
Length = 134
Score = 62.5 bits (145), Expect = 5e-10
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 120 LSLIDNGAVLFLLVYYIITLSDLECDYLNSQECCEKLNYWLLPKYIAHSFVTLLLLLHGQ 299
L+L+ A++F +++II +L+ DY N + C LN +LP+Y+ H+F ++ L +
Sbjct: 2 LALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCAAE 61
Query: 300 VILMLLNLPMFIWLTFEYFTIP-QGNLGVYDP 392
+ + LN+P+ + + Y + P G+YDP
Sbjct: 62 WLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDP 93
>BC022780-1|AAH22780.1| 160|Homo sapiens cornichon homolog 3
(Drosophila) protein.
Length = 160
Score = 38.3 bits (85), Expect = 0.009
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Frame = +3
Query: 114 FALSLIDNGAVLFLLVYYIITLSDLECDYL----------------NSQECCEKLNYWLL 245
+ LSL+ A++F +++II +L D+ N + C L +L
Sbjct: 10 YMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVHARERLRNIERICFLLRKLVL 69
Query: 246 PKYIAHSFVTLLLLLHGQVILMLLNLPMFIWLTFEYFTIPQGNLGV-YDP 392
P+Y HS ++ L + + + LN+P+ + + YF P + + YDP
Sbjct: 70 PEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDP 119
>AL596330-1|CAH73437.1| 160|Homo sapiens cornichon homolog 3
(Drosophila) protein.
Length = 160
Score = 38.3 bits (85), Expect = 0.009
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Frame = +3
Query: 114 FALSLIDNGAVLFLLVYYIITLSDLECDYL----------------NSQECCEKLNYWLL 245
+ LSL+ A++F +++II +L D+ N + C L +L
Sbjct: 10 YMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVHARERLRNIERICFLLRKLVL 69
Query: 246 PKYIAHSFVTLLLLLHGQVILMLLNLPMFIWLTFEYFTIPQGNLGV-YDP 392
P+Y HS ++ L + + + LN+P+ + + YF P + + YDP
Sbjct: 70 PEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDP 119
>AK096312-1|BAC04760.1| 160|Homo sapiens protein ( Homo sapiens
cDNA FLJ38993 fis, clone NT2RI2009194, highly similar to
CORNICHON-LIKE PROTEIN. ).
Length = 160
Score = 38.3 bits (85), Expect = 0.009
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Frame = +3
Query: 114 FALSLIDNGAVLFLLVYYIITLSDLECDYL----------------NSQECCEKLNYWLL 245
+ LSL+ A++F +++II +L D+ N + C L +L
Sbjct: 10 YMLSLVLCAALIFFAIWHIIAFDELRTDFKSPIDQCNPVHARERLRNIERICFLLRKLVL 69
Query: 246 PKYIAHSFVTLLLLLHGQVILMLLNLPMFIWLTFEYFTIPQGNLGV-YDP 392
P+Y HS ++ L + + + LN+P+ + + YF P + + YDP
Sbjct: 70 PEYSIHSLFCIMFLCAQEWLTLGLNVPLLFYHFWRYFHCPADSSELAYDP 119
>BC047953-1|AAH47953.1| 160|Homo sapiens cornichon homolog 2
(Drosophila) protein.
Length = 160
Score = 35.5 bits (78), Expect = 0.064
Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Frame = +3
Query: 114 FALSLIDNGAVLFLLVYYIITLSDLECDYLNS----------------QECCEKLNYWLL 245
+ L+L+ +++F ++++II +L D+ N + C L ++
Sbjct: 10 YMLTLVLCASLIFFVIWHIIAFDELRTDFKNPIDQGNPARARERLKNIERICCLLRKLVV 69
Query: 246 PKYIAHSFVTLLLLLHGQVILMLLNLPMFIWLTFEYFTIP-QGNLGVYD 389
P+Y H L+ L + + + LN+P+ + + YF P G+ +YD
Sbjct: 70 PEYSIHGLFCLMFLCAAEWVTLGLNIPLLFYHLWRYFHRPADGSEVMYD 118
>AK090988-1|BAC03563.1| 151|Homo sapiens protein ( Homo sapiens
cDNA FLJ33669 fis, clone BRAMY2028740. ).
Length = 151
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 150 FLLVYYIITLSDLECDYLNSQECCEKLNYWLLPKYI 257
F+ ++ I L L+ D++ C + L YWL KYI
Sbjct: 110 FIFIFNCINLH-LDNDFVKGVCCVQNLRYWLRVKYI 144
>BC007230-1|AAH07230.1| 494|Homo sapiens COCH protein protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 140 TIIDQRQCKNQGFAKYHNYNLLKTT 66
T +D+ C+N GF YH N TT
Sbjct: 316 TFVDKAVCRNNGFFSYHMPNWFGTT 340
>AY916789-1|AAW82432.1| 550|Homo sapiens coagulation factor C
homolog, cochlin (Limulus polyphemus) protein.
Length = 550
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 140 TIIDQRQCKNQGFAKYHNYNLLKTT 66
T +D+ C+N GF YH N TT
Sbjct: 316 TFVDKAVCRNNGFFSYHMPNWFGTT 340
>AY358900-1|AAQ89259.1| 550|Homo sapiens COCH protein.
Length = 550
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 140 TIIDQRQCKNQGFAKYHNYNLLKTT 66
T +D+ C+N GF YH N TT
Sbjct: 316 TFVDKAVCRNNGFFSYHMPNWFGTT 340
>AK130273-1|BAC85316.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ26763 fis, clone PRS02632, highly similar to
COCHLIN PRECURSOR. ).
Length = 401
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 140 TIIDQRQCKNQGFAKYHNYNLLKTT 66
T +D+ C+N GF YH N TT
Sbjct: 167 TFVDKAVCRNNGFFSYHMPNWFGTT 191
>AF006740-1|AAC39545.1| 550|Homo sapiens Coch-5B2 protein.
Length = 550
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 140 TIIDQRQCKNQGFAKYHNYNLLKTT 66
T +D+ C+N GF YH N TT
Sbjct: 316 TFVDKAVCRNNGFFSYHMPNWFGTT 340
>BC063241-1|AAH63241.1| 322|Homo sapiens sideroflexin 1 protein.
Length = 322
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 190 SRSDNVII*YTNKNNTAPLSINDNAKTKVS 101
++S N ++ YTN++ APL++N+ VS
Sbjct: 124 NQSFNAVVNYTNRSGDAPLTVNELGTAYVS 153
>BC020517-1|AAH20517.1| 236|Homo sapiens SFXN1 protein protein.
Length = 236
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 190 SRSDNVII*YTNKNNTAPLSINDNAKTKVS 101
++S N ++ YTN++ APL++N+ VS
Sbjct: 38 NQSFNAVVNYTNRSGDAPLTVNELGTAYVS 67
>AK022938-1|BAB14318.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ12876 fis, clone NT2RP2003781, moderately
similar to HYPOTHETICAL 36.7 KD PROTEIN AH6.2 IN
CHROMOSOME II. ).
Length = 236
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 190 SRSDNVII*YTNKNNTAPLSINDNAKTKVS 101
++S N ++ YTN++ APL++N+ VS
Sbjct: 38 NQSFNAVVNYTNRSGDAPLTVNELGTAYVS 67
>AK022287-1|BAB14003.1| 242|Homo sapiens protein ( Homo sapiens
cDNA FLJ12225 fis, clone MAMMA1001139, weakly similar to
SRE-2 PROTEIN. ).
Length = 242
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 190 SRSDNVII*YTNKNNTAPLSINDNAKTKVS 101
++S N ++ YTN++ APL++N+ VS
Sbjct: 63 NQSFNAVVNYTNRSGDAPLTVNELGTAYVS 92
>AF327346-1|AAL56007.1| 322|Homo sapiens tricarboxylate carrier
protein protein.
Length = 322
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 190 SRSDNVII*YTNKNNTAPLSINDNAKTKVS 101
++S N ++ YTN++ APL++N+ VS
Sbjct: 124 NQSFNAVVNYTNRSGDAPLTVNELGTAYVS 153
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,513,148
Number of Sequences: 237096
Number of extensions: 1014709
Number of successful extensions: 1252
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -