Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I12
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 346 1e-95
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 346 1e-95
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 346 1e-95
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 346 1e-95
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 346 1e-95
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 346 1e-95
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 345 2e-95
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 343 5e-95
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 334 2e-92
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 307 4e-84
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 253 9e-68
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 213 1e-55
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 9e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 9e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 2e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 1e-45
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 171 5e-43
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 142 3e-34
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 101 6e-22
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 52 5e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 34 0.10
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.96
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 30 1.7
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein. 29 2.9
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 29 2.9
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 29 2.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 3.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 3.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 3.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 3.9
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 5.1
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 5.1
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.8
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 346 bits (850), Expect = 1e-95
Identities = 159/162 (98%), Positives = 162/162 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 535
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 536 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 346 bits (850), Expect = 1e-95
Identities = 159/162 (98%), Positives = 162/162 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 535
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 536 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 346 bits (850), Expect = 1e-95
Identities = 159/162 (98%), Positives = 162/162 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 535
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 536 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 346 bits (850), Expect = 1e-95
Identities = 159/162 (98%), Positives = 162/162 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 535
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 536 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 346 bits (850), Expect = 1e-95
Identities = 159/162 (98%), Positives = 162/162 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 535
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 536 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 346 bits (850), Expect = 1e-95
Identities = 159/162 (98%), Positives = 162/162 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 535
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 536 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
TQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 162
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 345 bits (848), Expect = 2e-95
Identities = 159/162 (98%), Positives = 162/162 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 535
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 536 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 162
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 343 bits (844), Expect = 5e-95
Identities = 157/162 (96%), Positives = 162/162 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 535
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 536 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 162
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 334 bits (822), Expect = 2e-92
Identities = 153/160 (95%), Positives = 159/160 (99%)
Frame = +2
Query: 182 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 361
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 362 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 541
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 542 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
IMFETFNTPAMYV IQAVLSLYASGRTTGIVLD+GDGV+H
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTH 161
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 307 bits (754), Expect = 4e-84
Identities = 141/144 (97%), Positives = 144/144 (100%)
Frame = +2
Query: 230 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 409
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 410 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 589
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 590 AVLSLYASGRTTGIVLDSGDGVSH 661
AVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTH 148
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 253 bits (619), Expect = 9e-68
Identities = 116/118 (98%), Positives = 118/118 (100%)
Frame = +2
Query: 308 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 487
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 488 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+H
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTH 118
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 213 bits (519), Expect = 1e-55
Identities = 92/155 (59%), Positives = 123/155 (79%), Gaps = 1/155 (0%)
Frame = +2
Query: 200 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 379
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 380 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 556
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 557 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTH 165
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 9e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKI 433
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 9e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKI 433
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDMEKI 433
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 1e-45
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 355
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 356 SKRGILTLKYPIEHGIVTNWDDM 424
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 171 bits (415), Expect = 5e-43
Identities = 83/157 (52%), Positives = 111/157 (70%), Gaps = 3/157 (1%)
Frame = +2
Query: 200 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 373
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 374 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 550
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 551 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 661
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTH 165
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 142 bits (343), Expect = 3e-34
Identities = 79/183 (43%), Positives = 105/183 (57%), Gaps = 21/183 (11%)
Frame = +2
Query: 176 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 319
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 320 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 496
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 497 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDG 652
E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 653 VSH 661
V+H
Sbjct: 181 VTH 183
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 101 bits (241), Expect = 6e-22
Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 17/171 (9%)
Frame = +2
Query: 185 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 358
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 359 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 493
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 494 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 646
+E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 51.6 bits (118), Expect = 5e-07
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Frame = +2
Query: 191 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 370
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 371 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 550
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 551 ETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSG 646
+ F ++ + L S + +V+DSG
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 51.6 bits (118), Expect = 5e-07
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Frame = +2
Query: 191 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 370
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 371 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 550
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 551 ETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSG 646
+ F ++ + L S + +V+DSG
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 41.1 bits (92), Expect = 7e-04
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 2/155 (1%)
Frame = +2
Query: 200 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 373
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 374 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 553
+E + D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 554 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 658
+ + Q L LYA TTG+V+D G+ V+
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERVN 333
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 321 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPL 211
P T TP RGRP I + ++ P P PDPL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 654 TPSPESSTIPVVRPDAYSESTAWIATYMAGVL 559
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +3
Query: 456 SCV*LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPP--CT*LSRPCSHCTRPVVPP 626
+C PR + SC P +P P P C PS P C P + C P PP
Sbjct: 69 NCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 0.96
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 477 STQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVY 656
+++S SP P P P L P PP +S+ + PV PP + P+M+
Sbjct: 1330 TSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMIL 1389
Query: 657 P 659
P
Sbjct: 1390 P 1390
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 283 GATSSPGRHGRHGSEG 330
G + +PGRHGRHG+ G
Sbjct: 109 GPSGTPGRHGRHGAPG 124
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 474 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 620
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>Z29967-2|CAA82855.1| 722|Caenorhabditis elegans lin-15A protein.
Length = 722
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 474 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 620
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 474 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 620
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 474 RSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVV 620
+S+ PS P P++ R R S+PS + CT L+ PC C + ++
Sbjct: 173 KSSAEIFSHFPSEPSPSKPRATREGSQPSDYTYCTYLT-PCILCEKALL 220
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 294 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 184
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 641 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 294 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 184
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 294 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 184
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 294 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 184
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 405 TMPCSMGYLSVRIPLLLCASSPT*ESF*PMPTMTPW*RGRPTIEGN-TARGASSPAKPAL 229
T+ S PL++ +SS S T+TP +G PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 228 HIPDPLSTTNAATSSS 181
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +1
Query: 283 GATSSPGRHGRHGSEGLLRR**G-TEQEGYPHTQIPH----RTRHRHQLGR 420
G PGRHGRHGS R G + G PH H H H GR
Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGR 408
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 471 PRSTQSCSPKLPSTPKPTE 527
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 471 PRSTQSCSPKLPSTPKPTE 527
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 471 PRSTQSCSPKLPSTPKPTE 527
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 471 PRSTQSCSPKLPSTPKPTE 527
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 230 KAGFAGDDAPRAVFPSIVGRPRHQG 304
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 619 YHRYRAGFRRWCIP 660
YH+YRA FR W +P
Sbjct: 135 YHKYRAFFRGWFVP 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,390,992
Number of Sequences: 27780
Number of extensions: 375001
Number of successful extensions: 1393
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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