Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_I10
         (125 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   0.26 
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   0.26 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   1.0  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              19   5.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          19   7.3  

>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 0.26
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +1

Query: 40  DEEILIFSKCAMRVVQFSLSEEDLN 114
           DE +L+F +C M+  +F++ +E+ N
Sbjct: 56  DENVLLFIECTMK--KFNVVDENAN 78


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 0.26
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 40  DEEILIFSKCAMRVVQFSLSEEDLNSH 120
           DE + ++ +CAM+   F   + + N H
Sbjct: 56  DENVQLYIECAMKKFSFVDKDGNFNEH 82


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 22  GLEPSCDEEILIFSKCAMRVVQFSLSEEDLNSHR 123
           G EP   EEIL+ +K  +     S+   +  +HR
Sbjct: 56  GTEPRSKEEILLHAKDFLEQYFSSIRRLNSEAHR 89


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +1

Query: 40 DEEILIFSKCAMR 78
          DE++ +FS+C ++
Sbjct: 56 DEKVQLFSECLIK 68


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 62  EKIKISSSQLGSNPRA 15
           +K  ISS+ LGS  R+
Sbjct: 208 KKYAISSNSLGSRSRS 223


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,881
Number of Sequences: 438
Number of extensions: 333
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 22
effective length of database: 136,707
effective search space used:  2597433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)