Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_I08
         (437 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   0.89 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   2.1  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    24   2.7  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.3  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.3  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   6.3  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   6.3  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 0.89
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 66  IISAENWK-PATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 242
           I+    +K P  K ++ + AL    N+   E   R +LAE  +KD +K    A E+ K+ 
Sbjct: 245 IVGTTRYKVPLLKINERVDAL----NEERTEKHNRCKLAEREMKDLEKPKTEAVEYLKQE 300

Query: 243 S 245
           +
Sbjct: 301 N 301


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +3

Query: 96  TKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 248
           T+    ++ L A + D +       + AEE LK  KK ++ + +  KKH +
Sbjct: 765 TQCSAKVKDLQAKIADGKGHRERELKSAEEDLKRSKKKSEESRKNWKKHEQ 815


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 120 ALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNA 221
           AL  L N+P+ +  +RAE+ E+      K T +A
Sbjct: 322 ALFELANNPDIQERVRAEMLEKLQLHDGKITYDA 355


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 327 CDMPTSAVDSF 295
           CD PTS +DSF
Sbjct: 267 CDEPTSGLDSF 277


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 327 CDMPTSAVDSF 295
           CD PTS +DSF
Sbjct: 267 CDEPTSGLDSF 277


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 327 CDMPTSAVDSF 295
           CD PTS +DSF
Sbjct: 245 CDEPTSGLDSF 255


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 214 KMQKNLPKNIVKNDLQIKIGYSLHNCCK*IYSTGW 318
           ++QK   K   K  +QIK   + + CC+    TGW
Sbjct: 183 RVQKKQTKQNKK--IQIKHTKTKNGCCRKTCGTGW 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,928
Number of Sequences: 2352
Number of extensions: 6605
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)