Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_I05
         (533 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14 pro...   199   6e-51
BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14 p...   199   6e-51
BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14 p...   199   6e-51
BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14 p...   199   6e-51
BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14 p...   199   6e-51
BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14 p...   199   6e-51
BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal pr...   187   2e-47
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ...    31   3.4  
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ...    31   3.4  
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ...    31   3.4  
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ...    31   3.4  
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ...    31   3.4  
AF118275-1|AAD27584.1|  995|Homo sapiens atrophin-related protei...    31   3.4  
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein...    31   3.4  
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot...    31   3.4  
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.                 31   3.4  
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.     31   3.4  

>M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  199 bits (485), Expect = 6e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)
 Frame = +1

Query: 34  MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 213
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 214 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 393
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 394 XXXMKIGRIEDVTPVPSDST 453
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  199 bits (485), Expect = 6e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)
 Frame = +1

Query: 34  MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 213
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 214 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 393
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 394 XXXMKIGRIEDVTPVPSDST 453
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  199 bits (485), Expect = 6e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)
 Frame = +1

Query: 34  MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 213
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 214 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 393
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 394 XXXMKIGRIEDVTPVPSDST 453
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  199 bits (485), Expect = 6e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)
 Frame = +1

Query: 34  MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 213
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 214 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 393
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 394 XXXMKIGRIEDVTPVPSDST 453
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  199 bits (485), Expect = 6e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)
 Frame = +1

Query: 34  MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 213
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 214 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 393
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 394 XXXMKIGRIEDVTPVPSDST 453
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  199 bits (485), Expect = 6e-51
 Identities = 99/140 (70%), Positives = 106/140 (75%)
 Frame = +1

Query: 34  MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 213
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 214 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 393
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 394 XXXMKIGRIEDVTPVPSDST 453
              MKIGRIEDVTP+PSDST
Sbjct: 121 RSGMKIGRIEDVTPIPSDST 140


>BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal
           protein S14 protein.
          Length = 170

 Score =  187 bits (456), Expect = 2e-47
 Identities = 93/140 (66%), Positives = 101/140 (72%)
 Frame = +1

Query: 34  MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 213
           MAP K K  KEE  + LGPQ   GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGGM
Sbjct: 1   MAPGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGM 60

Query: 214 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 393
           KVKADRDE+SPYAAML  QDVA++CK LGI ALHI+LRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRALA 120

Query: 394 XXXMKIGRIEDVTPVPSDST 453
              MKIGRIEDVTP+PSDST
Sbjct: 121 CSGMKIGRIEDVTPIPSDST 140


>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
            dipeptide (RE) repeats protein.
          Length = 1566

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 127  VPPRILSHPPSAGDQESPEPPLLQLCFFSG 38
            +PP   SHPP+   Q +P+PP  Q  F  G
Sbjct: 1013 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042


>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1298

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 127 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 38
           +PP   SHPP+   Q +P+PP  Q  F  G
Sbjct: 745 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 774


>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
            dipeptide (RE) repeats protein.
          Length = 1566

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 127  VPPRILSHPPSAGDQESPEPPLLQLCFFSG 38
            +PP   SHPP+   Q +P+PP  Q  F  G
Sbjct: 1013 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042


>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1298

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 127 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 38
           +PP   SHPP+   Q +P+PP  Q  F  G
Sbjct: 745 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 774


>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
            dipeptide (RE) repeats protein.
          Length = 1566

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 127  VPPRILSHPPSAGDQESPEPPLLQLCFFSG 38
            +PP   SHPP+   Q +P+PP  Q  F  G
Sbjct: 1013 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042


>AF118275-1|AAD27584.1|  995|Homo sapiens atrophin-related protein
           ARP protein.
          Length = 995

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 127 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 38
           +PP   SHPP+   Q +P+PP  Q  F  G
Sbjct: 442 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 471


>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
           protein.
          Length = 1012

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 127 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 38
           +PP   SHPP+   Q +P+PP  Q  F  G
Sbjct: 459 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 488


>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
           protein.
          Length = 1012

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 127 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 38
           +PP   SHPP+   Q +P+PP  Q  F  G
Sbjct: 459 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 488


>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
          Length = 1566

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 127  VPPRILSHPPSAGDQESPEPPLLQLCFFSG 38
            +PP   SHPP+   Q +P+PP  Q  F  G
Sbjct: 1013 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042


>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
          Length = 1552

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 127  VPPRILSHPPSAGDQESPEPPLLQLCFFSG 38
            +PP   SHPP+   Q +P+PP  Q  F  G
Sbjct: 999  LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1028


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,060,346
Number of Sequences: 237096
Number of extensions: 1905712
Number of successful extensions: 6468
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6465
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)