Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_I03
         (389 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   0.42 
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   0.74 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            22   6.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    22   6.9  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 26.2 bits (55), Expect = 0.42
 Identities = 12/54 (22%), Positives = 29/54 (53%)
 Frame = -3

Query: 300 DSFFCPQSIF*INLTVQWFVYMSLHLRVVSCVPAVLSFVFSTCAVALLHLVFSM 139
           D    P S+F + + +Q  +   LH + +  +PA L +  +  ++ +L +++S+
Sbjct: 657 DGILAPSSVFFLAVALQIVITGVLHPQEMEALPAGLVYYITIPSMYMLLVIYSV 710


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.4 bits (53), Expect = 0.74
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 205 SCSAFFRFFNLCSCITSFG 149
           SCS+FF+ F  C C   FG
Sbjct: 401 SCSSFFQQFFHCYCPVKFG 419


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 111 CKFDFVLKFKNYLK 70
           C+ D+V +F+ YLK
Sbjct: 924 CECDYVTRFQEYLK 937


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 150 PNEVMQLHRLKKRKKALQERMKQ 218
           PNE+  ++R+K +   LQ R  +
Sbjct: 329 PNELTNINRIKGKMLLLQRRFSE 351


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,375
Number of Sequences: 2352
Number of extensions: 7664
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)