Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I03
(389 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 25 0.31
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 2.2
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 2.2
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 2.9
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 22 2.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 8.7
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 20 8.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 8.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 8.7
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 20 8.7
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 20 8.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 8.7
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 25.0 bits (52), Expect = 0.31
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 205 SCSAFFRFFNLCSCITSFG 149
SCS+FF+ F C C FG
Sbjct: 418 SCSSFFQQFFHCYCPVRFG 436
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.2 bits (45), Expect = 2.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 231 DSCKQTTVQLDLSRILTGDKRKNPFSKNDQEHSK 332
+ C T++LD R+L + K FSK D+ K
Sbjct: 128 EDCLLFTIELD--RVLESPRGKYEFSKYDKLKKK 159
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.2 bits (45), Expect = 2.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 231 DSCKQTTVQLDLSRILTGDKRKNPFSKNDQEHSK 332
+ C T++LD R+L + K FSK D+ K
Sbjct: 143 EDCLLFTIELD--RVLESPRGKYEFSKYDKLKKK 174
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 2.9
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -3
Query: 150 VFSMVKVVPLFT 115
+F++VK+ PLFT
Sbjct: 302 IFNLVKISPLFT 313
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 21.8 bits (44), Expect = 2.9
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -3
Query: 150 VFSMVKVVPLFT 115
+F++VK+ PLFT
Sbjct: 52 IFNLVKISPLFT 63
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 165 QLHRLKKRKKALQERMKQPSNED 233
+LH + K + + +RMK+ D
Sbjct: 397 ELHTILKELRFITDRMKKADESD 419
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 165 QLHRLKKRKKALQERMKQPSNED 233
+LH + K + + +RMK+ D
Sbjct: 397 ELHTILKELRFITDRMKKADESD 419
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 165 QLHRLKKRKKALQERMKQPSNED 233
+LH + K + + +RMK+ D
Sbjct: 397 ELHTILKELRFITDRMKKADESD 419
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 165 QLHRLKKRKKALQERMKQPSNED 233
+LH + K + + +RMK+ D
Sbjct: 397 ELHTILKELRFITDRMKKADESD 419
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 165 QLHRLKKRKKALQERMKQPSNED 233
+LH + K + + +RMK+ D
Sbjct: 397 ELHTILKELRFITDRMKKADESD 419
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 165 QLHRLKKRKKALQERMKQPSNED 233
+LH + K + + +RMK+ D
Sbjct: 397 ELHTILKELRFITDRMKKADESD 419
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 20.2 bits (40), Expect = 8.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 194 FLSFFQPVQLHYFIWF 147
FLS P + YFI+F
Sbjct: 15 FLSLLIPALILYFIYF 30
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 165 QLHRLKKRKKALQERMKQPSNED 233
+LH + K + + +RMK+ D
Sbjct: 465 ELHTILKELRFITDRMKKADESD 487
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +3
Query: 165 QLHRLKKRKKALQERMKQPSNED 233
+LH + K + + +RMK+ D
Sbjct: 465 ELHTILKELRFITDRMKKADESD 487
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.2 bits (40), Expect = 8.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 284 GQKKESIFEE*SRTF*EDQN 343
G K+E++ EE RT DQ+
Sbjct: 174 GMKREAVQEERQRTKERDQS 193
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 20.2 bits (40), Expect = 8.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 284 GQKKESIFEE*SRTF*EDQN 343
G K+E++ EE RT DQ+
Sbjct: 174 GMKREAVQEERQRTKERDQS 193
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 8.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -3
Query: 327 NVLDHSSKMDSFFCPQS 277
N HS+K SF P+S
Sbjct: 751 NASKHSAKRPSFISPRS 767
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,461
Number of Sequences: 438
Number of extensions: 2183
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9514659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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