BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I01
(519 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormo... 24 2.7
AY334007-1|AAR01132.1| 202|Anopheles gambiae odorant receptor 1... 23 6.2
AY334006-1|AAR01131.1| 202|Anopheles gambiae odorant receptor 1... 23 6.2
AY334005-1|AAR01130.1| 202|Anopheles gambiae odorant receptor 1... 23 6.2
AF364130-1|AAL35506.1| 417|Anopheles gambiae putative odorant r... 23 6.2
EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle... 23 8.1
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 8.1
>DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormone
receptor protein.
Length = 354
Score = 24.2 bits (50), Expect = 2.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Frame = -2
Query: 500 SSHDMLKSLRTERVRAVIMLGATTFLC-TP---------IMKSNTKNVDVKAKKG*F 360
SS D+L + + +R IM+ +C TP + K +TKNVD + +KG F
Sbjct: 254 SSIDVLGRAKRKTLRMTIMIVIVFVVCWTPYYVMSLWYWLDKESTKNVDQRIQKGLF 310
>AY334007-1|AAR01132.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 23.0 bits (47), Expect = 6.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 237 AASYNKMEDTADSGIRVHGNSSI 305
+A+YN DT SG+ +H N I
Sbjct: 161 SATYNFSTDTMFSGLMLHINGQI 183
>AY334006-1|AAR01131.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 23.0 bits (47), Expect = 6.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 237 AASYNKMEDTADSGIRVHGNSSI 305
+A+YN DT SG+ +H N I
Sbjct: 161 SATYNFSTDTMFSGLMLHINGQI 183
>AY334005-1|AAR01130.1| 202|Anopheles gambiae odorant receptor 1
protein.
Length = 202
Score = 23.0 bits (47), Expect = 6.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 237 AASYNKMEDTADSGIRVHGNSSI 305
+A+YN DT SG+ +H N I
Sbjct: 161 SATYNFSTDTMFSGLMLHINGQI 183
>AF364130-1|AAL35506.1| 417|Anopheles gambiae putative odorant
receptor Or1 protein.
Length = 417
Score = 23.0 bits (47), Expect = 6.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 237 AASYNKMEDTADSGIRVHGNSSI 305
+A+YN DT SG+ +H N I
Sbjct: 195 SATYNFSTDTMFSGLMLHINGQI 217
>EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle
protein protein.
Length = 178
Score = 22.6 bits (46), Expect = 8.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 240 ASYNKMEDTADSGIRVHGN 296
+ Y+K D+A S +RVH +
Sbjct: 53 SQYSKAVDSAHSSVRVHSS 71
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 22.6 bits (46), Expect = 8.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 197 FKSISTFQNNLTIASCLFQRHFTYSNTN 114
+K +S + NLT + R+FT+ N
Sbjct: 1556 YKDVSNYAKNLTYQFFDYARYFTFPYWN 1583
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,239
Number of Sequences: 2352
Number of extensions: 9952
Number of successful extensions: 70
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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