Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_I01
         (519 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036683-1|AAH36683.1|  142|Homo sapiens transmembrane protein 1...   161   1e-39
AK095420-1|BAC04545.1|  125|Homo sapiens protein ( Homo sapiens ...   161   1e-39
BC022550-1|AAH22550.1|   47|Homo sapiens C16orf69 protein protein.     49   9e-06
BX538130-1|CAD98031.1|  986|Homo sapiens hypothetical protein pr...    30   4.2  
AK131488-1|BAD18633.1|  602|Homo sapiens protein ( Homo sapiens ...    30   4.2  
AK131304-1|BAD18471.1|  994|Homo sapiens protein ( Homo sapiens ...    30   4.2  
BC060862-1|AAH60862.1|  985|Homo sapiens ring finger protein 111...    30   5.6  
AY621329-1|AAT51868.1|   95|Homo sapiens beta-defensin 133 protein.    29   7.4  
AY358708-1|AAQ89071.1|   95|Homo sapiens KFLL827 protein.              29   7.4  
AL034548-1|CAI19174.1|   95|Homo sapiens defensin, beta 32 (UNQ8...    29   7.4  
AF525932-1|AAP47225.1|   95|Homo sapiens beta-defensin 32 precur...    29   7.4  
AY007124-1|AAG01992.1|  163|Homo sapiens protein ( Homo sapiens ...    29   9.8  
AB096959-1|BAE46374.1|   83|Homo sapiens keratin associated prot...    29   9.8  

>BC036683-1|AAH36683.1|  142|Homo sapiens transmembrane protein 188
           protein.
          Length = 142

 Score =  161 bits (391), Expect = 1e-39
 Identities = 75/110 (68%), Positives = 87/110 (79%)
 Frame = +1

Query: 190 DLKAFERRLTEVIACLQPATTRWRILLTVVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 369
           DLKAFERRLTE I CLQPAT RWR+LL VVSVCTA  A++WL+DP T  VS   SLWNHP
Sbjct: 26  DLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHP 85

Query: 370 FFAFTSTFLVLLFMMGVHRKVVAPSIITARTRSVLNDFNMSCDDTGKLIL 519
           FF  +   L+ LF  G+H++VVAPSII AR R+VL ++NMSCDDTGKLIL
Sbjct: 86  FFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTGKLIL 135


>AK095420-1|BAC04545.1|  125|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38101 fis, clone D3OST1000270. ).
          Length = 125

 Score =  161 bits (391), Expect = 1e-39
 Identities = 75/110 (68%), Positives = 87/110 (79%)
 Frame = +1

Query: 190 DLKAFERRLTEVIACLQPATTRWRILLTVVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 369
           DLKAFERRLTE I CLQPAT RWR+LL VVSVCTA  A++WL+DP T  VS   SLWNHP
Sbjct: 9   DLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHP 68

Query: 370 FFAFTSTFLVLLFMMGVHRKVVAPSIITARTRSVLNDFNMSCDDTGKLIL 519
           FF  +   L+ LF  G+H++VVAPSII AR R+VL ++NMSCDDTGKLIL
Sbjct: 69  FFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTGKLIL 118


>BC022550-1|AAH22550.1|   47|Homo sapiens C16orf69 protein protein.
          Length = 47

 Score = 49.2 bits (112), Expect = 9e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
 Frame = +1

Query: 190 DLKAFERRLTEVIACLQPATTRWR-ILLTVV 279
           DLKAFERRLTE I CLQPAT RWR +LL ++
Sbjct: 9   DLKAFERRLTEYIHCLQPATGRWRSVLLHII 39


>BX538130-1|CAD98031.1|  986|Homo sapiens hypothetical protein
           protein.
          Length = 986

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +3

Query: 225 NSMSAASYNKME----DTADSGIRVHGNSSISLADGSPHTCSLSNS 350
           NS S  SY++ +    D ++SGIR HG+ S   A      C +S+S
Sbjct: 552 NSSSGTSYHEQQALPVDLSNSGIRSHGSGSFHGASAFDPCCPVSSS 597


>AK131488-1|BAD18633.1|  602|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16671 fis, clone THYMU3001428. ).
          Length = 602

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +3

Query: 225 NSMSAASYNKME----DTADSGIRVHGNSSISLADGSPHTCSLSNS 350
           NS S  SY++ +    D ++SGIR HG+ S   A      C +S+S
Sbjct: 151 NSSSGTSYHEQQALPVDLSNSGIRSHGSGSFHGASAFDPCCPVSSS 196


>AK131304-1|BAD18471.1|  994|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16278 fis, clone NT2RI3001132, highly  similar
           to Mus musculus Arkadia (Arkadia) mRNA. ).
          Length = 994

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +3

Query: 225 NSMSAASYNKME----DTADSGIRVHGNSSISLADGSPHTCSLSNS 350
           NS S  SY++ +    D ++SGIR HG+ S   A      C +S+S
Sbjct: 552 NSSSGTSYHEQQALPVDLSNSGIRSHGSGSFHGASAFDPCCPVSSS 597


>BC060862-1|AAH60862.1|  985|Homo sapiens ring finger protein 111
           protein.
          Length = 985

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +3

Query: 225 NSMSAASYNKME---DTADSGIRVHGNSSISLADGSPHTCSLSNS 350
           NS S  SY++     D ++SGIR HG+ S   A      C +S+S
Sbjct: 552 NSSSGTSYHEQALPVDLSNSGIRSHGSGSFHGASAFDPCCPVSSS 596


>AY621329-1|AAT51868.1|   95|Homo sapiens beta-defensin 133 protein.
          Length = 95

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 264 YPPSCCSWLQTCYYLCKTSLKC 199
           Y  +CC W +T  ++C  S KC
Sbjct: 34  YCRTCCHWGETALFMCNASRKC 55


>AY358708-1|AAQ89071.1|   95|Homo sapiens KFLL827 protein.
          Length = 95

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 264 YPPSCCSWLQTCYYLCKTSLKC 199
           Y  +CC W +T  ++C  S KC
Sbjct: 34  YCRTCCHWGETALFMCNASRKC 55


>AL034548-1|CAI19174.1|   95|Homo sapiens defensin, beta 32 (UNQ827)
           (DEFB32) protein.
          Length = 95

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 264 YPPSCCSWLQTCYYLCKTSLKC 199
           Y  +CC W +T  ++C  S KC
Sbjct: 34  YCRTCCHWGETALFMCNASRKC 55


>AF525932-1|AAP47225.1|   95|Homo sapiens beta-defensin 32 precursor
           protein.
          Length = 95

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 264 YPPSCCSWLQTCYYLCKTSLKC 199
           Y  +CC W +T  ++C  S KC
Sbjct: 34  YCRTCCHWGETALFMCNASRKC 55


>AY007124-1|AAG01992.1|  163|Homo sapiens protein ( Homo sapiens
           clone CDABP0021 mRNA sequence. ).
          Length = 163

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = +3

Query: 213 SYRGNSMSAASYNKMEDTADSGIRVHGNSSISLADGSPHTCSLSNSVIMESSFLRFYI 386
           S+R   +   S ++ + +ADSG R    S+ S+ D S      SNS+    SFL F+I
Sbjct: 48  SHRMELLGELSTSRSKSSADSGCRPGSISASSMRDSSFSAFCFSNSL----SFLLFFI 101


>AB096959-1|BAE46374.1|   83|Homo sapiens keratin associated protein
           protein.
          Length = 83

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 303 CCYCRAHGYHCQQYPPSCCSWLQTCYYLCKTS 208
           C Y    GY C  Y  SCC +   CY  C +S
Sbjct: 51  CGYGSGCGYGCG-YSSSCCGYRPLCYRRCYSS 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,151,011
Number of Sequences: 237096
Number of extensions: 1396475
Number of successful extensions: 3125
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3125
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)