Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_I01
(519 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021571-5|CAA16513.2| 140|Caenorhabditis elegans Hypothetical ... 83 2e-16
AL021571-6|CAN99719.1| 142|Caenorhabditis elegans Hypothetical ... 81 5e-16
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 32 0.28
U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 29 2.6
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 29 2.6
U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF039048-11|AAB94232.1| 421|Caenorhabditis elegans Hypothetical... 27 6.1
AC024090-7|AAF35429.2| 294|Caenorhabditis elegans Hypothetical ... 27 6.1
AL110485-25|CAB60373.1| 672|Caenorhabditis elegans Hypothetical... 27 8.0
>AL021571-5|CAA16513.2| 140|Caenorhabditis elegans Hypothetical
protein T19A6.3a protein.
Length = 140
Score = 82.6 bits (195), Expect = 2e-16
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Frame = +1
Query: 190 DLKAFERRLTEVIACLQPATTRWRILLTVVSVCTAIAAYHWLMDPLTPVVSLTQ-SLWNH 366
DLK FE+RLTEVI + P TRWRI + + +V + + + + + ++
Sbjct: 18 DLKFFEKRLTEVITYMGPTCTRWRIAIVIFAVLVGVIGSKYFANEKIEIFQIPMIDMFLT 77
Query: 367 PFFAFTSTFLV--LLF-MMGVHRKVVAPSIITARTRSVLNDFNMSCDDTGKLIL 519
FT F V LLF + GVHR++VAP+I+ R R L+ F++SCD GKLI+
Sbjct: 78 THLDFTLCFFVGLLLFAVFGVHRRIVAPTIVARRCRDALSPFSLSCDHNGKLIV 131
>AL021571-6|CAN99719.1| 142|Caenorhabditis elegans Hypothetical
protein T19A6.3b protein.
Length = 142
Score = 81.0 bits (191), Expect = 5e-16
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Frame = +1
Query: 190 DLKAFERRLTEVIACLQPATTRWRILLTVVSVCTAIAAYHWLMDPLTPVV-----SLTQS 354
DLK FE+RLTEVI + P TRWRI + + +V + + + L + +
Sbjct: 18 DLKFFEKRLTEVITYMGPTCTRWRIAIVIFAVLVGVIGSKYFANELQKIEIFQIPMIDMF 77
Query: 355 LWNHPFFAFTSTFLVLLF-MMGVHRKVVAPSIITARTRSVLNDFNMSCDDTGKLIL 519
L H F +LLF + GVHR++VAP+I+ R R L+ F++SCD GKLI+
Sbjct: 78 LTTHLDFTLCFFVGLLLFAVFGVHRRIVAPTIVARRCRDALSPFSLSCDHNGKLIV 133
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 31.9 bits (69), Expect = 0.28
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +3
Query: 132 KMSLEQTACDGKIILKR*YRFKSI*ATSYRGNSMSAASYNKMEDTADS--GIRVHG--NS 299
K ++ + DG++I+ + AT Y GN+ YN ++ AD+ GI G
Sbjct: 735 KSTIGEYERDGEVIVPIVFAVFQARATVYSGNNNEYNDYNVLKYLADNKYGIHTQGILEK 794
Query: 300 SISLADGSPHTCSLSNSVI 356
S+ + SP C+L+ ++
Sbjct: 795 SLGVVGPSPKNCALTRLMV 813
>U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical
protein C12D5.2 protein.
Length = 383
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = -1
Query: 312 PVICCYCR--AHGYHCQQYPPSCCSWLQTCYYLCKTSLKCF 196
P C C AHG+HC C YL K+ L+C+
Sbjct: 18 PFNCKICNRPAHGHHCDVATCKGCKTFFRRMYLLKSELRCY 58
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +1
Query: 262 ILLTVVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHPFFAFTSTFLVLLFMMGVHRKVVAP 441
++ ++ + A+ W+ D +V +L+ + F T+L L+ GV RK
Sbjct: 90 LVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGSYVIFFVTYLSLVCCEGVRRKFPVN 149
Query: 442 SIIT 453
I+T
Sbjct: 150 LIVT 153
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +1
Query: 262 ILLTVVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHPFFAFTSTFLVLLFMMGVHRKVVAP 441
++ ++ + A+ W+ D +V +L+ + F T+L L+ GV RK
Sbjct: 90 LVFIMLCIVAAVTVIPWVHDDTMRMVRRNSALYLGSYVIFFVTYLSLVCCEGVRRKFPVN 149
Query: 442 SIIT 453
I+T
Sbjct: 150 LIVT 153
>U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical
protein C05E11.7 protein.
Length = 463
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 127 IQIQIDHKKNIYLHNKKLLFQPEMNNNRFQQIQPKQ*QL 11
I I + + N+YL ++ F + NN Q+ P Q +L
Sbjct: 253 IYIALPEQTNVYLRPQRPTFAANLTNNNAAQLYPNQVEL 291
>AF039048-11|AAB94232.1| 421|Caenorhabditis elegans Hypothetical
protein F16B4.1 protein.
Length = 421
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/35 (25%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -1
Query: 300 CYCRAHGYHCQQYP-PSCCSWLQTCYYLCKTSLKC 199
C+ + HGYH + +C ++ + C++L + +C
Sbjct: 37 CFEKGHGYHFGVFSCRACAAFFRRCHFLKENRRRC 71
>AC024090-7|AAF35429.2| 294|Caenorhabditis elegans Hypothetical
protein C52E2.1 protein.
Length = 294
Score = 27.5 bits (58), Expect = 6.1
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 RGSTVTVSVGFVEIYYCSSLVEIITFYYVDKYFSCDQFVFE*VKCRW-NKQLAMVRLF*N 180
R + V+V++ F+EI+ + FY K +F V CRW N+ ++ ++ N
Sbjct: 45 RAANVSVTLDFIEIFLVEAAGTHSMFYIKPKSHQNREFPIHPV-CRWLNRNFSIEKIIKN 103
Query: 181 VDIDLKAFE 207
+ L E
Sbjct: 104 FLVALNLLE 112
>AL110485-25|CAB60373.1| 672|Caenorhabditis elegans Hypothetical
protein Y46G5A.31 protein.
Length = 672
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 184 DIDLKAFERRLTEVIACLQPATTRWRILLTVVSVCTAIAAYHWLM---DPLTP 333
D+D +A +R++ CL+ A + + T VS T + A H+L D LTP
Sbjct: 246 DLDAEAGKRKIYHQY-CLERAACQTAHIFTTVSEITGLEAEHFLCRKPDVLTP 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,606,824
Number of Sequences: 27780
Number of extensions: 231502
Number of successful extensions: 734
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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