SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_H21
         (510 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0493 + 18299885-18299892,18300201-18300837,18301254-183016...    39   0.003
02_05_1263 + 35316083-35316185,35317167-35317220,35317665-353179...    38   0.005
08_01_0673 - 5805218-5805349,5805936-5806026,5806416-5806471,580...    38   0.006
03_03_0131 - 14706123-14706171,14706364-14706422,14706504-147067...    38   0.006
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908...    36   0.014
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341...    36   0.019
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312...    36   0.025
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750...    36   0.025
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697...    33   0.13 
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294...    33   0.18 
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56...    31   0.71 
10_08_0365 + 17224777-17224852,17224949-17224989,17225175-172252...    30   0.94 
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310...    29   1.6  
05_04_0261 - 19505647-19506828                                         29   1.6  
10_08_0948 + 21754985-21755290,21756042-21756297,21756845-217569...    29   2.2  
04_04_0226 + 23754513-23756914,23756972-23757050,23759296-23760153     29   2.2  
10_08_0511 + 18435745-18436499,18436624-18436742,18436788-184373...    28   5.0  
08_02_1547 + 27795664-27795674,27795743-27795892,27796182-277979...    28   5.0  
02_05_0897 + 32603060-32603387,32604348-32604589,32604681-326048...    27   8.8  

>10_08_0493 +
           18299885-18299892,18300201-18300837,18301254-18301676,
           18301769-18302014,18302124-18302789,18303228-18303283,
           18303367-18303460,18303559-18303738
          Length = 769

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
 Frame = +3

Query: 171 KRDAYNDDGPSQKRVRQTDDEVTF-----------LIPSKVAGSIIGKGGTNISKLRSQY 317
           KR  +N D   +KR+    D+ T            L P K  GS++G+GG  +  LR   
Sbjct: 23  KRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKALRDTT 82

Query: 318 KASITVPD-CPG-PERVLSILTEDVDT 392
           KA I V D  PG  ERV+ I      T
Sbjct: 83  KAKIRVADSIPGADERVIIIFNYSSQT 109



 Score = 31.5 bits (68), Expect = 0.41
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 195 GPSQKRVRQTDDEVT-FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
           G   ++    DD +   L+P    G ++GKGG+ I +LR+   A I V
Sbjct: 150 GIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRV 197



 Score = 28.7 bits (61), Expect = 2.9
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
           ++PS   G IIG+GG  I+++R +  A I V
Sbjct: 390 VVPSNKVGCIIGEGGKVITEMRRRTGAEIRV 420



 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDC-PG 350
           V F IP+    S+IG GG N++++R    A + + +  PG
Sbjct: 685 VEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPG 724


>02_05_1263 +
           35316083-35316185,35317167-35317220,35317665-35317903,
           35317989-35318089,35318390-35318583,35318885-35319003,
           35319624-35319749,35320081-35320142,35320265-35320348,
           35320580-35320664
          Length = 388

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
 Frame = +3

Query: 216 RQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDC----PGPERVLSILTED 383
           ++    + FL+ +  AG IIGKGG+ I++ +SQ  A I +       PG    + +++  
Sbjct: 55  KEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL 114

Query: 384 VDTLLEIVKEILPCLSDRGPKGDINDQDLDVRVLIHQSRAG 506
            D +++ ++ IL  L   G + +  +    VR+++  S  G
Sbjct: 115 FDEVIKAMELILEKLLAEGEESNEAEARPKVRLVVPNSSCG 155



 Score = 28.3 bits (60), Expect = 3.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
           +V  ++P+   G IIGKGG+ I        A I +
Sbjct: 144 KVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKI 178


>08_01_0673 -
           5805218-5805349,5805936-5806026,5806416-5806471,
           5806571-5806852,5806924-5807057,5807088-5807163,
           5807247-5807747,5808454-5809037,5809579-5809597
          Length = 624

 Score = 37.5 bits (83), Expect = 0.006
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +3

Query: 225 DDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEI 404
           D+E   L+P+  + S+IGK G  I +LRS  KA I V     P  V        D  ++I
Sbjct: 144 DEEANILVPASQSASVIGKSGAVIKRLRSTSKAFIKVSP-KDPNEVTHSCAMSFDNFVQI 202



 Score = 33.5 bits (73), Expect = 0.10
 Identities = 19/54 (35%), Positives = 31/54 (57%)
 Frame = +3

Query: 255 KVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTEDVDTLLEIVKEI 416
           KV G +IGKGG+ ++ +RS+ KA+I +     P +  S      D L+E+  E+
Sbjct: 395 KVIGCLIGKGGSIVNDMRSKTKAAIYISKGEKPRKASS-----SDELVEVFGEV 443



 Score = 31.5 bits (68), Expect = 0.41
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +3

Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILT 377
           L P+   G +IGKGG  I  +R +  A I V D    +R  SI+T
Sbjct: 320 LCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKN-DREESIIT 363


>03_03_0131 -
           14706123-14706171,14706364-14706422,14706504-14706770,
           14706857-14707114,14707207-14707629,14707942-14708514
          Length = 542

 Score = 37.5 bits (83), Expect = 0.006
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
 Frame = +3

Query: 225 DDEV-TFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPG--PERVLSIL--TEDVD 389
           DD V  +L PS+  GSIIG+GG    ++R+  +A I + +      ERV++I   + + +
Sbjct: 38  DDTVYRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETN 97

Query: 390 TLLEIVKEILP 422
           TL++   ++ P
Sbjct: 98  TLVDAEDKVCP 108



 Score = 31.1 bits (67), Expect = 0.54
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = +3

Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
           V  L+PS   G IIGKGG  I  +RS   A I V
Sbjct: 140 VRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRV 173



 Score = 28.7 bits (61), Expect = 2.9
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 7/111 (6%)
 Frame = +3

Query: 198 PSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASI------TVPDCPGPER 359
           P ++     +  +  L  +   G +IGKGG  I ++R +  A I      T  DC     
Sbjct: 270 PRREESSAKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSSNTEDDCIITVS 329

Query: 360 VLSILTEDVDTLLEIVKEILP-CLSDRGPKGDINDQDLDVRVLIHQSRAGC 509
                 + V   +     + P C     P+  I       R+L+  SR GC
Sbjct: 330 AKEFFEDPVSPTINAAVHLQPRCSEKTDPESAI--PSYTTRLLVSTSRIGC 378



 Score = 27.1 bits (57), Expect = 8.8
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
           L+ +   G +IGKGG+ I+++R   +A+I +
Sbjct: 370 LVSTSRIGCLIGKGGSIITEIRRTSRANIRI 400


>09_04_0618 +
           18988614-18989102,18989913-18990314,18990555-18990806,
           18991564-18991941,18992350-18992426,18992700-18992808,
           18993424-18993574,18993810-18993903,18997072-18997474,
           18997590-18997742,18998115-18998474
          Length = 955

 Score = 36.3 bits (80), Expect = 0.014
 Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
 Frame = +3

Query: 225 DDEVTF--LIPSKVAGSIIGKGGTNISKLRSQYKASITV--PDCPGPERVLSILT-EDVD 389
           + E+ F  +  +++ GSIIGKGG+ I  L+S+  ASI +  P+    ERV+ I   E+ +
Sbjct: 241 EQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSE 300

Query: 390 TLLEIVKEILPCLSDRGPKGDINDQD-LDVRVLIHQSRAGC 509
            +    ++ +  +  R  +  ++    +  R+L+     GC
Sbjct: 301 MMHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGC 341



 Score = 28.7 bits (61), Expect = 2.9
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
           L+PS+  G ++GKGG+ I+++R    A I +
Sbjct: 333 LVPSQHIGCLLGKGGSIIAEMRKITGAGIRI 363


>06_02_0257 -
           13533689-13533714,13533799-13533925,13534013-13534121,
           13534193-13534272,13534758-13534979,13536070-13536318,
           13537032-13537484,13539834-13540556
          Length = 662

 Score = 35.9 bits (79), Expect = 0.019
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
 Frame = +3

Query: 177 DAYNDDGPSQKRVRQTDDEVTFLI-PSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG 350
           D   + GP  K  R      T LI P    G ++GKGG  I ++R++ K  I + P    
Sbjct: 169 DEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILPRDQH 228

Query: 351 PERVLSILTEDVDTLLE--IVKEILPCLSDR 437
             R +S+  E V  + E   VK+ +  +SDR
Sbjct: 229 TPRCVSLSEEVVQVVGEGNCVKKAVAIISDR 259


>03_05_0388 +
           23726957-23727418,23730016-23730262,23731072-23731220,
           23731313-23731597,23731665-23731889,23734251-23734445
          Length = 520

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +3

Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPG--PERVLSILTED 383
           LIP++  G+IIG+ G  I K+  + KA I + D P   PER + I  +D
Sbjct: 113 LIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKD 161



 Score = 31.5 bits (68), Expect = 0.41
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +3

Query: 165 IMKRDAYNDDGPSQKRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
           + KR     DG S +  R   +      L+P+  AGS+IGK G  I  ++   K+ + +
Sbjct: 177 VYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRI 235


>01_01_0956 +
           7505206-7505322,7505860-7506723,7506841-7507260,
           7508091-7508342,7508696-7508953,7509798-7509877,
           7509959-7510070,7510492-7510541,7511070-7511171,
           7511215-7511276,7511888-7511928
          Length = 785

 Score = 35.5 bits (78), Expect = 0.025
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +3

Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPG-PERVLSILTEDVD 389
           L P+  +G++IGKGG  I+K+R +    I V +  PG  ERV+ I   D D
Sbjct: 93  LCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKD 143



 Score = 28.3 bits (60), Expect = 3.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPD 341
           L  S   G IIGKGG NI  +++     I V D
Sbjct: 419 LCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLD 451


>02_02_0119 +
           6978697-6979045,6979519-6979581,6979757-6979866,
           6979969-6980154,6980266-6980361,6980493-6980564,
           6980798-6980909,6982448-6982534,6982680-6983872
          Length = 755

 Score = 33.1 bits (72), Expect = 0.13
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 20/112 (17%)
 Frame = +3

Query: 228 DEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV------PDCPGPERVLSI--LTED 383
           D+    I +   G +IGKGG  I  ++++  A I V      P  P  ER + I    E 
Sbjct: 258 DQFQMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGDPATERTVYIDGTQEQ 317

Query: 384 VDTLLEIVKEILPCLSDRGP----KGD--------INDQDLDVRVLIHQSRA 503
           ++T  ++V E+    S   P     GD        + + DLDV+ +  Q+RA
Sbjct: 318 IETAKQLVIEVTNVQSSLAPIVLHMGDDRWASAMLLENIDLDVQTIFLQNRA 369


>12_02_0998 +
           25126114-25126596,25129213-25129339,25129349-25129459,
           25130122-25130270,25130356-25130643,25130753-25130941,
           25131445-25131619,25132219-25132316
          Length = 539

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = +3

Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPG--PERVLSILTED 383
           L+P++  G++IG+ G  I K+  + +A I V D P   P+R + I  +D
Sbjct: 120 LVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKD 168



 Score = 31.1 bits (67), Expect = 0.54
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = +3

Query: 165 IMKRDAYNDDGPSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDC 344
           + KR     DG S +  R        L+P+  AGS+IGK G  I  ++   K  + + + 
Sbjct: 184 VHKRITDGLDGESDQPQRAAGP-TRLLVPASQAGSLIGKQGATIKSIQDASKCVLRILES 242

Query: 345 PGP-----ERVLSILTEDVD 389
             P     +RV+ I  E +D
Sbjct: 243 VPPVALSDDRVVEIQGEPLD 262


>08_01_0080 +
           566509-566746,566904-567151,567347-567532,567639-567734,
           567836-567907,567990-568106,570531-571676
          Length = 700

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 228 DEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASI-TVPDCPGPERV 362
           ++   L+P    G IIGKGG  I  L+++  A I  +P  P PE V
Sbjct: 246 EQFEMLVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHP-PEGV 290


>10_08_0365 +
           17224777-17224852,17224949-17224989,17225175-17225244,
           17225338-17225486,17225940-17226035,17226481-17226551,
           17227077-17227138,17227311-17227374,17227463-17227547,
           17227631-17227757,17228241-17228374,17228808-17229122
          Length = 429

 Score = 30.3 bits (65), Expect = 0.94
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -1

Query: 216 APASARDRHHCKHHASLFNNRSTPA*DQGGS 124
           +PA+A+  HH  HH++  ++RS PA  +GG+
Sbjct: 384 SPAAAQRHHHHHHHSAAADDRSPPA-AKGGT 413


>06_03_0766 -
           24425486-24426245,24430766-24430855,24430951-24431070,
           24431568-24431746,24432046-24432231,24432454-24432547,
           24432679-24432743,24433652-24433987
          Length = 609

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD 341
           + + +AG IIGKGGTN   +     A + + D
Sbjct: 487 VDASLAGGIIGKGGTNTKHISRMTGAKLAIRD 518


>05_04_0261 - 19505647-19506828
          Length = 393

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 234 LRRQSGAPASARDRHHCKHHASLFNNR 154
           +RR S A A+  + +H  HHA+LF +R
Sbjct: 14  IRRASAAAAAGANPNHHHHHATLFTHR 40


>10_08_0948 +
           21754985-21755290,21756042-21756297,21756845-21756999,
           21757077-21757349,21757582-21757776,21757867-21758058
          Length = 458

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +3

Query: 225 DDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCP-GPERVLSILTEDVDTLLE 401
           D     ++P    GSIIG+ G  I +L  + KA + V + P G    + +++   D  LE
Sbjct: 55  DSVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALE 114

Query: 402 I 404
           +
Sbjct: 115 L 115



 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 237 TFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPG 350
           T  IP   A  IIG  G NI+ +R+   A +T+ +  G
Sbjct: 334 TMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLG 371


>04_04_0226 + 23754513-23756914,23756972-23757050,23759296-23760153
          Length = 1112

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +3

Query: 189  DDGPSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVP 338
            DD   ++R + +D    F  PS  +GS  G GG + S + S     +T P
Sbjct: 1047 DDDHRRRREQGSDSASNFSGPSSGSGSGSGSGGRSASTVGSPILGLVTAP 1096


>10_08_0511 +
           18435745-18436499,18436624-18436742,18436788-18437372,
           18438534-18438667,18439128-18439148,18439656-18439739,
           18439832-18440077,18440763-18440925,18441024-18441066,
           18441392-18441773,18442212-18442267,18442351-18442417,
           18442542-18442721
          Length = 944

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
           ++PS   G I+G+GG  I+++R +  A I V
Sbjct: 600 VVPSNKVGCILGEGGKVITEMRRRTGAEIRV 630


>08_02_1547 +
           27795664-27795674,27795743-27795892,27796182-27797906,
           27799447-27799546,27799657-27800268,27800399-27800521,
           27800905-27801039,27801108-27801209,27801716-27801778,
           27801854-27802045,27802121-27802258,27802632-27802694,
           27803068-27803466
          Length = 1270

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 369 ILTEDVDTLLEIVKEILPCLSDRGPKGDINDQDLDVR 479
           +  E + T   ++K  L C+  + PKG I D D  +R
Sbjct: 199 VADEKIATYEWVLKRFLDCMCQKHPKGLITDSDNSMR 235


>02_05_0897 +
           32603060-32603387,32604348-32604589,32604681-32604824,
           32604889-32605050,32605129-32605212,32605528-32605601,
           32605850-32606039,32606120-32606275,32606368-32606465,
           32606976-32607102,32607193-32607292,32607402-32607572,
           32607790-32607838,32607912-32608003,32608705-32608774,
           32608999-32609023,32609059-32609293,32609425-32609525,
           32609614-32609865
          Length = 899

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 351 PERVLSILTEDVDTLLEIVKEILPCLSDRGPKGDINDQD 467
           P+ ++++L E  DT   +VKE+LP  S R   G     D
Sbjct: 793 PDVLVNVLREGYDTTCGVVKEVLPDGSCRVALGSSGSGD 831


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,156,700
Number of Sequences: 37544
Number of extensions: 272246
Number of successful extensions: 697
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -