Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_H21
(510 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 97 3e-20
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 97 3e-20
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 85 2e-16
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 83 4e-16
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 83 4e-16
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 83 4e-16
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 83 4e-16
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 83 4e-16
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 83 4e-16
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 83 4e-16
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 70 5e-12
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 50 5e-06
U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3 pr... 41 0.002
BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein. 41 0.002
AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element (F... 41 0.002
AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element (F... 41 0.002
AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element (F... 41 0.002
AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element (F... 41 0.002
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 40 0.005
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 40 0.005
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 40 0.005
BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein. 39 0.012
BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protei... 39 0.012
BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protei... 39 0.012
AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens ... 39 0.012
AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein. 39 0.012
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 38 0.027
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 38 0.027
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 38 0.027
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 37 0.036
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 37 0.036
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 37 0.036
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 37 0.036
BC001325-1|AAH01325.1| 372|Homo sapiens Unknown (protein for IM... 37 0.047
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 36 0.082
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 36 0.082
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 36 0.082
U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antige... 36 0.082
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 36 0.082
BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventr... 36 0.082
BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventr... 36 0.082
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 36 0.082
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 36 0.082
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 36 0.082
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 36 0.082
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 36 0.082
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 36 0.082
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 36 0.082
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 36 0.082
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 36 0.082
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 36 0.082
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 36 0.11
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 36 0.11
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 36 0.11
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 35 0.19
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 35 0.19
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 35 0.19
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 35 0.19
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 35 0.19
AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG... 35 0.19
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 35 0.19
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 35 0.19
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 35 0.19
AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein. 35 0.19
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 35 0.19
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 35 0.19
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 34 0.25
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 34 0.33
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 34 0.33
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 34 0.33
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 33 0.58
BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein. 33 0.58
AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing regula... 33 0.58
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 33 0.58
AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG... 31 3.1
AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG... 31 3.1
AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protei... 31 3.1
AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens ... 30 4.1
BC095513-1|AAH95513.1| 471|Homo sapiens CNR1 protein protein. 29 9.4
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 97.1 bits (231), Expect = 3e-20
Identities = 53/103 (51%), Positives = 75/103 (72%), Gaps = 3/103 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK AG++IGKGG NI LR+ Y AS++VPD GPER+LSI +
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SA 92
Query: 381 DVDTLLEIVKEILPCLSD-RGPKGDINDQDLDVRVLIHQSRAG 506
D++T+ EI+K+I+P L + + KG +D D ++R+LIHQS AG
Sbjct: 93 DIETIGEILKKIIPTLEEYQHYKG--SDFDCELRLLIHQSLAG 133
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 97.1 bits (231), Expect = 3e-20
Identities = 53/103 (51%), Positives = 75/103 (72%), Gaps = 3/103 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK AG++IGKGG NI LR+ Y AS++VPD GPER+LSI +
Sbjct: 36 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SA 94
Query: 381 DVDTLLEIVKEILPCLSD-RGPKGDINDQDLDVRVLIHQSRAG 506
D++T+ EI+K+I+P L + + KG +D D ++R+LIHQS AG
Sbjct: 95 DIETIGEILKKIIPTLEEYQHYKG--SDFDCELRLLIHQSLAG 135
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPGPE-RVLSIL-TED 383
IP +AGSIIGKGG I ++R + ASI + + G E R+++I T+D
Sbjct: 372 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 420
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 84.6 bits (200), Expect = 2e-16
Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK AG++IGKGG NI LR+ Y AS++VPD GPER+LSI T
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIST- 92
Query: 381 DVDTLLEIVKEILPCLSD 434
D++T+ EI+K+I+P L +
Sbjct: 93 DIETIGEILKKIIPTLEE 110
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPGPE-RVLSIL-TED 383
IP +AGSIIGKGG I ++R + ASI + + G E R+++I T+D
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 83.4 bits (197), Expect = 4e-16
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK AG++IGKGG NI LR+ Y AS++VPD GPER+LSI +
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SA 92
Query: 381 DVDTLLEIVKEILPCLSD 434
D++T+ EI+K+I+P L +
Sbjct: 93 DIETIGEILKKIIPTLEE 110
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPGPE-RVLSIL-TED 383
IP +AGSIIGKGG I ++R + ASI + + G E R+++I T+D
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 83.4 bits (197), Expect = 4e-16
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK AG++IGKGG NI LR+ Y AS++VPD GPER+LSI +
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SA 92
Query: 381 DVDTLLEIVKEILPCLSD 434
D++T+ EI+K+I+P L +
Sbjct: 93 DIETIGEILKKIIPTLEE 110
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPGPE-RVLSIL-TED 383
IP +AGSIIGKGG I ++R + ASI + + G E R+++I T+D
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 83.4 bits (197), Expect = 4e-16
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK AG++IGKGG NI LR+ Y AS++VPD GPER+LSI +
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SA 92
Query: 381 DVDTLLEIVKEILPCLSD 434
D++T+ EI+K+I+P L +
Sbjct: 93 DIETIGEILKKIIPTLEE 110
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPGPE-RVLSIL-TED 383
IP +AGSIIGKGG I ++R + ASI + + G E R+++I T+D
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 83.4 bits (197), Expect = 4e-16
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK AG++IGKGG NI LR+ Y AS++VPD GPER+LSI +
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SA 92
Query: 381 DVDTLLEIVKEILPCLSD 434
D++T+ EI+K+I+P L +
Sbjct: 93 DIETIGEILKKIIPTLEE 110
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPGPE-RVLSIL-TED 383
IP +AGSIIGKGG I ++R + ASI + + G E R+++I T+D
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 83.4 bits (197), Expect = 4e-16
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK AG++IGKGG NI LR+ Y AS++VPD GPER+LSI +
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SA 92
Query: 381 DVDTLLEIVKEILPCLSD 434
D++T+ EI+K+I+P L +
Sbjct: 93 DIETIGEILKKIIPTLEE 110
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPGPE-RVLSIL-TED 383
IP +AGSIIGKGG I ++R + ASI + + G E R+++I T+D
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 83.4 bits (197), Expect = 4e-16
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK AG++IGKGG NI LR+ Y AS++VPD GPER+LSI +
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SA 92
Query: 381 DVDTLLEIVKEILPCLSD 434
D++T+ EI+K+I+P L +
Sbjct: 93 DIETIGEILKKIIPTLEE 110
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPGPE-RVLSIL-TED 383
IP +AGSIIGKGG I ++R + ASI + + G E R+++I T+D
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 83.4 bits (197), Expect = 4e-16
Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK AG++IGKGG NI LR+ Y AS++VPD GPER+LSI +
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSI-SA 92
Query: 381 DVDTLLEIVKEILPCLSD 434
D++T+ EI+K+I+P L +
Sbjct: 93 DIETIGEILKKIIPTLEE 110
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPGPE-RVLSIL-TED 383
IP +AGSIIGKGG I ++R + ASI + + G E R+++I T+D
Sbjct: 394 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 442
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 69.7 bits (163), Expect = 5e-12
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Frame = +3
Query: 207 KRVRQTDD--EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE 380
KR R TD+ E+ L+ SK NI LR+ Y AS++VPD GPER+LSI +
Sbjct: 34 KRSRNTDEMVELRILLQSK-----------NIKALRTDYNASVSVPDSSGPERILSI-SA 81
Query: 381 DVDTLLEIVKEILPCLSD-RGPKGDINDQDLDVRVLIHQSRAG 506
D++T+ EI+K+I+P L + + KG +D D ++R+LIHQS AG
Sbjct: 82 DIETIGEILKKIIPTLEEYQHYKG--SDFDCELRLLIHQSLAG 122
Score = 36.7 bits (81), Expect = 0.047
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD-CPGPE-RVLSIL-TED 383
IP +AGSIIGKGG I ++R + ASI + + G E R+++I T+D
Sbjct: 359 IPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQD 407
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 50.0 bits (114), Expect = 5e-06
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +3
Query: 312 QYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSD 434
QY AS++VPD GPER+LSI + D++T+ EI+K+I+P L +
Sbjct: 2 QYNASVSVPDSSGPERILSI-SADIETIGEILKKIIPTLEE 41
>U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3
protein.
Length = 600
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PER--VLSILTEDVDTLLEIV 407
F +P K+ G IIG+GG IS+++++ I + + G PER VL+ E ++ ++
Sbjct: 110 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL 169
Query: 408 KEILP-CLSDRGPKGDINDQDLDVRVLIHQSRAG 506
+I+ C + G DI+ +LI S+ G
Sbjct: 170 GQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVG 203
Score = 36.7 bits (81), Expect = 0.047
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP 353
E+T+ +P+ G +IGKGG NI + Q A + + P P
Sbjct: 384 EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPP 424
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKAS-ITVPDCP---GPERVLSILTE--DVDTLLEI 404
LIP+ G +IG+GG I +L+ + + + D P G ++ L I + V E+
Sbjct: 196 LIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREM 255
Query: 405 VKEIL---PCLSDRGPKGDINDQ 464
V EI+ RG +GD N +
Sbjct: 256 VLEIIREKDQADFRGVRGDFNSR 278
>BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein.
Length = 261
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PER--VLSILTEDVDTLLEIV 407
F +P K+ G IIG+GG IS+++++ I + + G PER VL+ E ++ ++
Sbjct: 22 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL 81
Query: 408 KEILP-CLSDRGPKGDINDQDLDVRVLIHQSRAG 506
+I+ C + G DI+ +LI S+ G
Sbjct: 82 GQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVG 115
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKAS-ITVPDCP---GPERVLSILTE--DVDTLLEI 404
LIP+ G +IG+GG I +L+ + + + D P G ++ L I + V E+
Sbjct: 108 LIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREM 167
Query: 405 VKEIL---PCLSDRGPKGDINDQ 464
V EI+ RG +GD N +
Sbjct: 168 VLEIIREKDQADFRGVRGDFNSR 190
>AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PER--VLSILTEDVDTLLEIV 407
F +P K+ G IIG+GG IS+++++ I + + G PER VL+ E ++ ++
Sbjct: 22 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL 81
Query: 408 KEILP-CLSDRGPKGDINDQDLDVRVLIHQSRAG 506
+I+ C + G DI+ +LI S+ G
Sbjct: 82 GQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVG 115
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKAS-ITVPDCP---GPERVLSILTE--DVDTLLEI 404
LIP+ G +IG+GG I +L+ + + + D P G ++ L I + V E+
Sbjct: 108 LIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREM 167
Query: 405 VKEIL---PCLSDRGPKGDINDQ 464
V EI+ RG +GD N +
Sbjct: 168 VLEIIREKDQADFRGVRGDFNSR 190
>AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PER--VLSILTEDVDTLLEIV 407
F +P K+ G IIG+GG IS+++++ I + + G PER VL+ E ++ ++
Sbjct: 82 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL 141
Query: 408 KEILP-CLSDRGPKGDINDQDLDVRVLIHQSRAG 506
+I+ C + G DI+ +LI S+ G
Sbjct: 142 GQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVG 175
Score = 36.7 bits (81), Expect = 0.047
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP 353
E+T+ +P+ G +IGKGG NI + Q A + + P P
Sbjct: 356 EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPP 396
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKAS-ITVPDCP---GPERVLSILTE--DVDTLLEI 404
LIP+ G +IG+GG I +L+ + + + D P G ++ L I + V E+
Sbjct: 168 LIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREM 227
Query: 405 VKEIL---PCLSDRGPKGDINDQ 464
V EI+ RG +GD N +
Sbjct: 228 VLEIIREKDQADFRGVRGDFNSR 250
>AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PER--VLSILTEDVDTLLEIV 407
F +P K+ G IIG+GG IS+++++ I + + G PER VL+ E ++ ++
Sbjct: 22 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL 81
Query: 408 KEILP-CLSDRGPKGDINDQDLDVRVLIHQSRAG 506
+I+ C + G DI+ +LI S+ G
Sbjct: 82 GQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVG 115
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKAS-ITVPDCP---GPERVLSILTE--DVDTLLEI 404
LIP+ G +IG+GG I +L+ + + + D P G ++ L I + V E+
Sbjct: 108 LIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREM 167
Query: 405 VKEIL---PCLSDRGPKGDINDQ 464
V EI+ RG +GD N +
Sbjct: 168 VLEIIREKDQADFRGVRGDFNSR 190
>AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PER--VLSILTEDVDTLLEIV 407
F +P K+ G IIG+GG IS+++++ I + + G PER VL+ E ++ ++
Sbjct: 82 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL 141
Query: 408 KEILP-CLSDRGPKGDINDQDLDVRVLIHQSRAG 506
+I+ C + G DI+ +LI S+ G
Sbjct: 142 GQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVG 175
Score = 36.7 bits (81), Expect = 0.047
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP 353
E+T+ +P+ G +IGKGG NI + Q A + + P P
Sbjct: 356 EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPP 396
Score = 29.9 bits (64), Expect = 5.4
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKAS-ITVPDCP---GPERVLSILTE--DVDTLLEI 404
LIP+ G +IG+GG I +L+ + + + D P G ++ L I + V E+
Sbjct: 168 LIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQQAREM 227
Query: 405 VKEIL---PCLSDRGPKGDINDQ 464
V EI+ RG +GD N +
Sbjct: 228 VLEIIREKDQADFRGVRGDFNSR 250
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 39.9 bits (89), Expect = 0.005
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG+ I ++R A + V P ER ++I + D +++ VK+
Sbjct: 103 VVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI-SGTPDAIIQCVKQ 161
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 162 ICVVMLESPPKG 173
Score = 37.1 bits (82), Expect = 0.036
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G + K+R + A I + + PER+++I
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTI 61
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 39.9 bits (89), Expect = 0.005
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG+ I ++R A + V P ER ++I + D +++ VK+
Sbjct: 135 VVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI-SGTPDAIIQCVKQ 193
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 194 ICVVMLESPPKG 205
Score = 37.1 bits (82), Expect = 0.036
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G + K+R + A I + + PER+++I
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTI 93
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 39.9 bits (89), Expect = 0.005
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG+ I ++R A + V P ER ++I + D +++ VK+
Sbjct: 103 VVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI-SGTPDAIIQCVKQ 161
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 162 ICVVMLESPPKG 173
Score = 37.1 bits (82), Expect = 0.036
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G + K+R + A I + + PER+++I
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTI 61
>BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein.
Length = 360
Score = 38.7 bits (86), Expect = 0.012
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
L+ K GSIIGK G + ++R Q A IT+ + PER+ +I
Sbjct: 23 LMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTI 65
Score = 32.7 bits (71), Expect = 0.77
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCP 347
+IP+ GS+IGK GT I ++R T+P P
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHP 141
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
FL+P+ + G +IG+ G+ IS++R A I +
Sbjct: 203 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
>BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 38.7 bits (86), Expect = 0.012
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
L+ K GSIIGK G + ++R Q A IT+ + PER+ +I
Sbjct: 23 LMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTI 65
Score = 34.7 bits (76), Expect = 0.19
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
+IP+ GS+IGK GT I ++R A + V P ER +++ + D ++ V++
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTV-SGVPDAIILCVRQ 165
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 166 ICAVILESPPKG 177
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
FL+P+ + G +IG+ G+ IS++R A I +
Sbjct: 246 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 38.7 bits (86), Expect = 0.012
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
L+ K GSIIGK G + ++R Q A IT+ + PER+ +I
Sbjct: 23 LMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTI 65
Score = 34.7 bits (76), Expect = 0.19
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
+IP+ GS+IGK GT I ++R A + V P ER +++ + D ++ V++
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTV-SGVPDAIILCVRQ 165
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 166 ICAVILESPPKG 177
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
FL+P+ + G +IG+ G+ IS++R A I +
Sbjct: 246 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ13931 fis, clone Y79AA1000752, moderately
similar to PUTATIVE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN X. ).
Length = 403
Score = 38.7 bits (86), Expect = 0.012
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
L+ K GSIIGK G + ++R Q A IT+ + PER+ +I
Sbjct: 23 LMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTI 65
Score = 34.7 bits (76), Expect = 0.19
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
+IP+ GS+IGK GT I ++R A + V P ER +++ + D ++ V++
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTV-SGVPDAIILCVRQ 165
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 166 ICAVILESPPKG 177
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
FL+P+ + G +IG+ G+ IS++R A I +
Sbjct: 246 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein.
Length = 403
Score = 38.7 bits (86), Expect = 0.012
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
L+ K GSIIGK G + ++R Q A IT+ + PER+ +I
Sbjct: 23 LMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTI 65
Score = 34.7 bits (76), Expect = 0.19
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
+IP+ GS+IGK GT I ++R A + V P ER +++ + D ++ V++
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTV-SGVPDAIILCVRQ 165
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 166 ICAVILESPPKG 177
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
FL+P+ + G +IG+ G+ IS++R A I +
Sbjct: 246 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 37.5 bits (83), Expect = 0.027
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I +++E VK+
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI-AGIPQSIIECVKQ 161
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 162 ICVVMLESPPKG 173
Score = 37.1 bits (82), Expect = 0.036
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ K+R + A I + + PER++++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITL 61
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 37.5 bits (83), Expect = 0.027
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I +++E VK+
Sbjct: 115 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI-AGIPQSIIECVKQ 173
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 174 ICVVMLESPPKG 185
Score = 37.1 bits (82), Expect = 0.036
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ K+R + A I + + PER++++
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITL 73
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 37.5 bits (83), Expect = 0.027
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I +++E VK+
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI-AGIPQSIIECVKQ 161
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 162 ICVVMLESPPKG 173
Score = 37.1 bits (82), Expect = 0.036
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ K+R + A I + + PER++++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITL 61
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 37.1 bits (82), Expect = 0.036
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ K+R + A I + + PER++++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITL 61
Score = 35.5 bits (78), Expect = 0.11
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I +++E VK+
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI-AGIPQSIIECVKQ 161
Query: 414 I----LPCLSDRGPKG 449
I L LS PKG
Sbjct: 162 ICVVMLETLSQSPPKG 177
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 37.1 bits (82), Expect = 0.036
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ K+R + A I + + PER++++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITL 61
Score = 35.5 bits (78), Expect = 0.11
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I +++E VK+
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI-AGIPQSIIECVKQ 161
Query: 414 I----LPCLSDRGPKG 449
I L LS PKG
Sbjct: 162 ICVVMLETLSQSPPKG 177
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 37.1 bits (82), Expect = 0.036
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ K+R + A I + + PER++++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITL 61
Score = 35.5 bits (78), Expect = 0.11
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I +++E VK+
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI-AGIPQSIIECVKQ 161
Query: 414 I----LPCLSDRGPKG 449
I L LS PKG
Sbjct: 162 ICVVMLETLSQSPPKG 177
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 37.1 bits (82), Expect = 0.036
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G + K+R + A I + + PER+++I
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTI 61
Score = 34.7 bits (76), Expect = 0.19
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG+ I ++R A + V P ER ++I + D +++ VK+
Sbjct: 103 VVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI-SGTPDAIIQCVKQ 161
Query: 414 I 416
I
Sbjct: 162 I 162
>BC001325-1|AAH01325.1| 372|Homo sapiens Unknown (protein for
IMAGE:3456579) protein.
Length = 372
Score = 36.7 bits (81), Expect = 0.047
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP 353
E+T+ +P+ G +IGKGG NI + Q A + + P P
Sbjct: 112 EITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPP 152
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 35.9 bits (79), Expect = 0.082
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ ++R + A I + + PER++++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITL 61
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I ++ E VK+
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVP-QSVTECVKQ 161
Query: 414 I 416
I
Sbjct: 162 I 162
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 35.9 bits (79), Expect = 0.082
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ ++R + A I + + PER++++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITL 61
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 219 QTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
QT E+T IP+ + G IIG+ G NI+++R A I +
Sbjct: 279 QTTHELT--IPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I ++ E VK+
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVP-QSVTECVKQ 161
Query: 414 I 416
I
Sbjct: 162 I 162
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 35.9 bits (79), Expect = 0.082
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ ++R + A I + + PER++++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITL 61
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 219 QTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
QT E+T IP+ + G IIG+ G NI+++R A I +
Sbjct: 279 QTTHELT--IPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I ++ E VK+
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVP-QSVTECVKQ 161
Query: 414 I 416
I
Sbjct: 162 I 162
>U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antigen-1
protein.
Length = 510
Score = 35.9 bits (79), Expect = 0.082
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 201 SQKRVRQTDDEVTFL---IPSKVAGSIIGKGGTNISKLRSQYKASI 329
S KR +D FL IPS AGSIIGKGG I +L+ + A+I
Sbjct: 38 STKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 83
Score = 33.9 bits (74), Expect = 0.33
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 198 PSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPG----PERVL 365
PS ++V ++P+ AG IIGKGG + + Q A + + P ERV+
Sbjct: 165 PSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVV 224
Query: 366 SILTE 380
++ E
Sbjct: 225 TVSGE 229
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 35.9 bits (79), Expect = 0.082
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 228 DEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE-DVDTLLEI 404
D V I K +IGK G NI++++ QYK S+ +P P E+ I E D + +
Sbjct: 436 DYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQA 493
Query: 405 VKEILPCLS 431
+E+L S
Sbjct: 494 KRELLELAS 502
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 267 SIIGKGGTNISKLRSQYKASITVP 338
+IIGKGG NI K+R + I +P
Sbjct: 595 NIIGKGGANIKKIREESNTKIDLP 618
>BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.082
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 201 SQKRVRQTDDEVTFL---IPSKVAGSIIGKGGTNISKLRSQYKASI 329
S KR +D FL IPS AGSIIGKGG I +L+ + A+I
Sbjct: 38 STKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 83
Score = 33.9 bits (74), Expect = 0.33
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 198 PSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPG----PERVL 365
PS ++V ++P+ AG IIGKGG + + Q A + + P ERV+
Sbjct: 162 PSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVV 221
Query: 366 SILTE 380
++ E
Sbjct: 222 TVSGE 226
>BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 35.9 bits (79), Expect = 0.082
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 201 SQKRVRQTDDEVTFL---IPSKVAGSIIGKGGTNISKLRSQYKASI 329
S KR +D FL IPS AGSIIGKGG I +L+ + A+I
Sbjct: 38 STKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 83
Score = 33.9 bits (74), Expect = 0.33
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 198 PSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPG----PERVL 365
PS ++V ++P+ AG IIGKGG + + Q A + + P ERV+
Sbjct: 162 PSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVV 221
Query: 366 SILTE 380
++ E
Sbjct: 222 TVSGE 226
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 35.9 bits (79), Expect = 0.082
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ ++R + A I + + PER++++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITL 61
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 219 QTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
QT E+T IP+ + G IIG+ G NI+++R A I +
Sbjct: 279 QTTHELT--IPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I ++ E VK+
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVP-QSVTECVKQ 161
Query: 414 I 416
I
Sbjct: 162 I 162
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 35.9 bits (79), Expect = 0.082
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 228 DEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE-DVDTLLEI 404
D V I K +IGK G NI++++ QYK S+ +P P E+ I E D + +
Sbjct: 66 DYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQA 123
Query: 405 VKEILPCLS 431
+E+L S
Sbjct: 124 KRELLELAS 132
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 267 SIIGKGGTNISKLRSQYKASITVP 338
+IIGKGG NI K+R + I +P
Sbjct: 225 NIIGKGGANIKKIREESNTKIDLP 248
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 35.9 bits (79), Expect = 0.082
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 228 DEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE-DVDTLLEI 404
D V I K +IGK G NI++++ QYK S+ +P P E+ I E D + +
Sbjct: 436 DYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQA 493
Query: 405 VKEILPCLS 431
+E+L S
Sbjct: 494 KRELLELAS 502
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 267 SIIGKGGTNISKLRSQYKASITVP 338
+IIGKGG NI K+R + I +P
Sbjct: 595 NIIGKGGANIKKIREESNTKIDLP 618
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 35.9 bits (79), Expect = 0.082
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 213 VRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPGPERVLSI 371
V + D E+ +P + IIG+ G NI +LR Q A I V + G ERVL I
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLI 101
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 35.9 bits (79), Expect = 0.082
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 213 VRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPGPERVLSI 371
V + D E+ +P + IIG+ G NI +LR Q A I V + G ERVL I
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLI 101
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 35.9 bits (79), Expect = 0.082
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 228 DEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE-DVDTLLEI 404
D V I K +IGK G NI++++ QYK S+ +P P E+ I E D + +
Sbjct: 119 DYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQA 176
Query: 405 VKEILPCLS 431
+E+L S
Sbjct: 177 KRELLELAS 185
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 267 SIIGKGGTNISKLRSQYKASITVP 338
+IIGKGG NI K+R + I +P
Sbjct: 278 NIIGKGGANIKKIREESNTKIDLP 301
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 35.9 bits (79), Expect = 0.082
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 213 VRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPGPERVLSI 371
V + D E+ +P + IIG+ G NI +LR Q A I V + G ERVL I
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLI 101
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 35.9 bits (79), Expect = 0.082
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 213 VRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPGPERVLSI 371
V + D E+ +P + IIG+ G NI +LR Q A I V + G ERVL I
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLI 101
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 35.9 bits (79), Expect = 0.082
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 228 DEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSILTE-DVDTLLEI 404
D V I K +IGK G NI++++ QYK S+ +P P E+ I E D + +
Sbjct: 436 DYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQA 493
Query: 405 VKEILPCLS 431
+E+L S
Sbjct: 494 KRELLELAS 502
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 267 SIIGKGGTNISKLRSQYKASITVP 338
+IIGKGG NI K+R + I +P
Sbjct: 595 NIIGKGGANIKKIREESNTKIDLP 618
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 35.9 bits (79), Expect = 0.082
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G ++ ++R + A I + + PER++++
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITL 61
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 219 QTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
QT E+T IP+ + G IIG+ G NI+++R A I +
Sbjct: 279 QTTHELT--IPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 30.7 bits (66), Expect = 3.1
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
++P+ GS+IGKGG I ++R A + V P ER ++I ++ E VK+
Sbjct: 103 VVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVP-QSVTECVKQ 161
Query: 414 I 416
I
Sbjct: 162 I 162
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
E +PS AG +IGKGG +++L++ A + VP P+
Sbjct: 510 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 551
Score = 33.9 bits (74), Expect = 0.33
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
V IP++ G+IIGK G +I +L ASI + GP+
Sbjct: 429 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 469
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 210 RVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
+ RQ D + L+P++ G+IIGK G I + Q ++ + +
Sbjct: 187 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI 228
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
E +PS AG +IGKGG +++L++ A + VP P+
Sbjct: 510 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 551
Score = 33.9 bits (74), Expect = 0.33
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
V IP++ G+IIGK G +I +L ASI + GP+
Sbjct: 429 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 469
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 210 RVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
+ RQ D + L+P++ G+IIGK G I + Q ++ + +
Sbjct: 187 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI 228
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
E +PS AG +IGKGG +++L++ A + VP P+
Sbjct: 468 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPD 509
Score = 33.9 bits (74), Expect = 0.33
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
V IP++ G+IIGK G +I +L ASI + GP+
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPD 427
Score = 32.3 bits (70), Expect = 1.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 210 RVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
+ RQ D + L+P++ G+IIGK G I + Q ++ + +
Sbjct: 188 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI 229
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 34.7 bits (76), Expect = 0.19
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
E +PS AG +IGKGG +++L++ A + VP P+
Sbjct: 489 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPD 530
Score = 31.5 bits (68), Expect = 1.8
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 201 SQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV---PDCPGPERVLSI 371
S + + D + L+P++ G+IIGK G I + Q ++ I V + E+ ++I
Sbjct: 187 SVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 246
Query: 372 LTEDVDTLLEIVKEILPCLSDRGPKGDIN-DQDLDVRVLIHQSRAG 506
L+ T K IL + DI +++ +++L H + G
Sbjct: 247 LSTPEGT-SAACKSILEIMHKEAQ--DIKFTEEIPLKILAHNNFVG 289
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 198 PSQKRVRQTDDEVTF-LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
P + Q++ E IP+ G+IIGK G +I +L ASI + P+
Sbjct: 395 PPYPQFEQSETETVHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 34.7 bits (76), Expect = 0.19
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
E +PS AG +IGKGG +++L++ A + VP P+
Sbjct: 489 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPD 530
Score = 31.5 bits (68), Expect = 1.8
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 201 SQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV---PDCPGPERVLSI 371
S + + D + L+P++ G+IIGK G I + Q ++ I V + E+ ++I
Sbjct: 187 SVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 246
Query: 372 LTEDVDTLLEIVKEILPCLSDRGPKGDIN-DQDLDVRVLIHQSRAG 506
L+ T K IL + DI +++ +++L H + G
Sbjct: 247 LSTPEGT-SAACKSILEIMHKEAQ--DIKFTEEIPLKILAHNNFVG 289
Score = 29.1 bits (62), Expect = 9.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 198 PSQKRVRQTDDEVTF-LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
P + Q++ E IP+ G+IIGK G +I +L ASI + P+
Sbjct: 395 PPYPQFEQSETETVHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.19
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASI 329
LIPS AGSIIGKGG I +L+ + A+I
Sbjct: 44 LIPSYAAGSIIGKGGQTIVQLQKETGATI 72
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCP 347
+ ++P+ AG IIGKGG + + Q A + + P
Sbjct: 138 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP 176
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 34.7 bits (76), Expect = 0.19
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV--PDCPGPERVLSILTEDVDTLLEIV 407
V IP++ G+IIGK G +I +L ASI + P+ P + + I+T + +
Sbjct: 269 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQ 328
Query: 408 KEILPCLSDRGPKGDINDQDLDVRVLIHQSRAG 506
I L + G + L+ + + S AG
Sbjct: 329 GRIYGKLKEENFFGPKEEVKLETHIRVPASAAG 361
Score = 34.3 bits (75), Expect = 0.25
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
E +P+ AG +IGKGG +++L++ A + VP P+
Sbjct: 350 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPD 391
Score = 29.1 bits (62), Expect = 9.4
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +3
Query: 201 SQKRVRQTDD-EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCP-----GPERV 362
++++ RQ D+ + L + G +IGK G N+ K+ + IT+ PER
Sbjct: 128 NREQTRQADEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDLTLYNPERT 187
Query: 363 LSI 371
+++
Sbjct: 188 ITV 190
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 34.7 bits (76), Expect = 0.19
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
E +PS AG +IGKGG +++L++ A + VP P+
Sbjct: 489 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPD 530
Score = 31.5 bits (68), Expect = 1.8
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 201 SQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV---PDCPGPERVLSI 371
S + + D + L+P++ G+IIGK G I + Q ++ I V + E+ ++I
Sbjct: 187 SVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 246
Query: 372 LTEDVDTLLEIVKEILPCLSDRGPKGDIN-DQDLDVRVLIHQSRAG 506
L+ T K IL + DI +++ +++L H + G
Sbjct: 247 LSTPEGT-SAACKSILEIMHKEAQ--DIKFTEEIPLKILAHNNFVG 289
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 198 PSQKRVRQTDDEVTFL-IPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
P + Q++ E L IP+ G+IIGK G +I +L ASI + P+
Sbjct: 395 PPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
>AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG10
protein.
Length = 369
Score = 34.7 bits (76), Expect = 0.19
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
+IP+ GS+IGK GT I ++R A + V P ER +++ + D ++ V++
Sbjct: 73 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTV-SGVPDAIILCVRQ 131
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 132 ICAVILESPPKG 143
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
FL+P+ + G +IG+ G+ IS++R A I +
Sbjct: 212 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 243
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 34.7 bits (76), Expect = 0.19
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV--PDCPGPERVLSILTEDVDTLLEIV 407
V IP++ G+IIGK G +I +L ASI + P+ P + + I+T + +
Sbjct: 408 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQ 467
Query: 408 KEILPCLSDRGPKGDINDQDLDVRVLIHQSRAG 506
I L + G + L+ + + S AG
Sbjct: 468 GRIYGKLKEENFFGPKEEVKLETHIRVPASAAG 500
Score = 34.3 bits (75), Expect = 0.25
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
E +P+ AG +IGKGG +++L++ A + VP P+
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPD 530
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 216 RQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
+Q D + L+P++ G+IIGK G I + Q ++ I V
Sbjct: 192 QQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV 231
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 34.7 bits (76), Expect = 0.19
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
E +PS AG +IGKGG +++L++ A + VP P+
Sbjct: 489 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPD 530
Score = 31.5 bits (68), Expect = 1.8
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +3
Query: 201 SQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV---PDCPGPERVLSI 371
S + + D + L+P++ G+IIGK G I + Q ++ I V + E+ ++I
Sbjct: 187 SVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 246
Query: 372 LTEDVDTLLEIVKEILPCLSDRGPKGDIN-DQDLDVRVLIHQSRAG 506
L+ T K IL + DI +++ +++L H + G
Sbjct: 247 LSTPEGT-SAACKSILEIMHKEAQ--DIKFTEEIPLKILAHNNFVG 289
Score = 30.7 bits (66), Expect = 3.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 198 PSQKRVRQTDDEVTFL-IPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
P + Q++ E L IP+ G+IIGK G +I +L ASI + P+
Sbjct: 395 PPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPD 448
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 34.7 bits (76), Expect = 0.19
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV--PDCPGPERVLSILTEDVDTLLEIV 407
V IP++ G+IIGK G +I +L ASI + P+ P + + I+T + +
Sbjct: 408 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQ 467
Query: 408 KEILPCLSDRGPKGDINDQDLDVRVLIHQSRAG 506
I L + G + L+ + + S AG
Sbjct: 468 GRIYGKLKEENFFGPKEEVKLETHIRVPASAAG 500
Score = 34.3 bits (75), Expect = 0.25
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPE 356
E +P+ AG +IGKGG +++L++ A + VP P+
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPD 530
Score = 32.3 bits (70), Expect = 1.0
Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Frame = +3
Query: 216 RQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV---PDCPGPERVLSI--LTE 380
+Q D + L+P++ G+IIGK G I + Q ++ I V + E+ +S+ E
Sbjct: 192 QQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPE 251
Query: 381 DVDTLLEIVKEILPCLSDRGPKGDINDQDLDVRVLIHQSRAG 506
+ +++ EI+ + K ++ +++L H + G
Sbjct: 252 GCSSACKMILEIM----HKEAKDTKTADEVPLKILAHNNFVG 289
>AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein.
Length = 397
Score = 34.7 bits (76), Expect = 0.19
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
L+ K GSIIGK G + ++R Q A IT+ + ER+ +I
Sbjct: 23 LMHGKEVGSIIGKKGETVKRIREQSSARITISEGSFLERITTI 65
Score = 33.5 bits (73), Expect = 0.44
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP---ERVLSILTEDVDTLLEIVKE 413
+IP+ GS+IG+ GT I ++R A + V P ER +++ + D ++ V++
Sbjct: 107 VIPASQCGSLIGQAGTKIKEIRETTGAQVQVAGDLFPNSTERAVTV-SGVPDAIILCVRQ 165
Query: 414 ILPCLSDRGPKG 449
I + + PKG
Sbjct: 166 ICAVILESPPKG 177
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
FL+P+ + G +IG+ G+ IS++R A I +
Sbjct: 246 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 34.7 bits (76), Expect = 0.19
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASI 329
LIPS AGSIIGKGG I +L+ + A+I
Sbjct: 38 LIPSYAAGSIIGKGGQTIVQLQKETGATI 66
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCP 347
+ ++P+ AG IIGKGG + + Q A + + P
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP 170
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 34.7 bits (76), Expect = 0.19
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASI 329
LIPS AGSIIGKGG I +L+ + A+I
Sbjct: 10 LIPSYAAGSIIGKGGQTIVQLQKETGATI 38
Score = 29.5 bits (63), Expect = 7.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCP 347
+ ++P+ AG IIGKGG + + Q A + + P
Sbjct: 104 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKP 142
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 34.3 bits (75), Expect = 0.25
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +3
Query: 171 KRDAYNDDGPSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCP 347
+ D++ P + +++ + +P + G IIG+GG IS+++ + I + PD
Sbjct: 81 QNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG 140
Query: 348 G-PER--VLSILTEDVDTLLEIVKEIL 419
G PER +L+ E V + ++ +I+
Sbjct: 141 GLPERSCMLTGTPESVQSAKRLLDQIV 167
Score = 33.1 bits (72), Expect = 0.58
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP 353
E F++P+ G IIGKGG I + Q A I + P P
Sbjct: 377 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPP 417
Score = 31.1 bits (67), Expect = 2.3
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV----PDCPGPERVLSILTEDVDTLLEIVK 410
+IP+ AG +IGKGG I +L+ + + + P G ++ L I T D + + +
Sbjct: 190 MIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRI-TGDPYKVQQAKE 248
Query: 411 EILPCLSDRGPKGDINDQ 464
+L + D+G ++ ++
Sbjct: 249 MVLELIRDQGGFREVRNE 266
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 33.9 bits (74), Expect = 0.33
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PERVLSI--LTEDVDTLLEIV 407
+ +P + G IIG+GG I+K++ + + PD G PER +S+ E V ++
Sbjct: 149 YRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMML 208
Query: 408 KEILPCLSDRGPKGDIND 461
+I+ GP G +D
Sbjct: 209 DDIV-SRGRGGPPGQFHD 225
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
E+TF IP+ G +IG+GG N+ + Q A + +
Sbjct: 426 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEI 460
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 33.9 bits (74), Expect = 0.33
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PERVLSI--LTEDVDTLLEIV 407
+ +P + G IIG+GG I+K++ + + PD G PER +S+ E V ++
Sbjct: 93 YRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMML 152
Query: 408 KEILPCLSDRGPKGDIND 461
+I+ GP G +D
Sbjct: 153 DDIV-SRGRGGPPGQFHD 169
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
E+TF IP+ G +IG+GG N+ + Q A + +
Sbjct: 368 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEI 402
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 33.9 bits (74), Expect = 0.33
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PERVLSI--LTEDVDTLLEIV 407
+ +P + G IIG+GG I+K++ + + PD G PER +S+ E V ++
Sbjct: 149 YRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMML 208
Query: 408 KEILPCLSDRGPKGDIND 461
+I+ GP G +D
Sbjct: 209 DDIV-SRGRGGPPGQFHD 225
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
E+TF IP+ G +IG+GG N+ + Q A + +
Sbjct: 426 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEI 460
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 33.1 bits (72), Expect = 0.58
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PER--VLSILTEDVDTLLEIV 407
+ +P + G IIG+GG IS+++ + I + PD G PER +L+ E V + ++
Sbjct: 105 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLL 164
Query: 408 KEIL 419
+I+
Sbjct: 165 DQIV 168
Score = 33.1 bits (72), Expect = 0.58
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP 353
E F++P+ G IIGKGG I + Q A I + P P
Sbjct: 378 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPP 418
Score = 31.1 bits (67), Expect = 2.3
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV----PDCPGPERVLSILTEDVDTLLEIVK 410
+IP+ AG +IGKGG I +L+ + + + P G ++ L I T D + + +
Sbjct: 191 MIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRI-TGDPYKVQQAKE 249
Query: 411 EILPCLSDRGPKGDINDQ 464
+L + D+G ++ ++
Sbjct: 250 MVLELIRDQGGFREVRNE 267
>BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.58
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPG-PER--VLSILTEDVDTLLEIV 407
+ +P + G IIG+GG IS+++ + I + PD G PER +L+ E V + ++
Sbjct: 105 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLL 164
Query: 408 KEIL 419
+I+
Sbjct: 165 DQIV 168
Score = 31.1 bits (67), Expect = 2.3
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV----PDCPGPERVLSILTEDVDTLLEIVK 410
+IP+ AG +IGKGG I +L+ + + + P G ++ L I T D + + +
Sbjct: 191 MIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRI-TGDPYKVQQAKE 249
Query: 411 EILPCLSDRGPKGDINDQ 464
+L + D+G ++ ++
Sbjct: 250 MVLELIRDQGGFREVRNE 267
>AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing
regulatory protein (FUSE binding protein 2) variant
protein.
Length = 384
Score = 33.1 bits (72), Expect = 0.58
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
E+TF IP+ G +IG+GG N+ + Q A + +
Sbjct: 244 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEI 278
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.58
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP 353
E F++P+ G IIGKGG I + Q A I + P P
Sbjct: 228 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPP 268
Score = 31.1 bits (67), Expect = 2.3
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV----PDCPGPERVLSILTEDVDTLLEIVK 410
+IP+ AG +IGKGG I +L+ + + + P G ++ L I T D + + +
Sbjct: 41 MIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRI-TGDPYKVQQAKE 99
Query: 411 EILPCLSDRGPKGDINDQ 464
+L + D+G ++ ++
Sbjct: 100 MVLELIRDQGGFREVRNE 117
>AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
FL+P+ + G +IG+ G+ IS++R A I +
Sbjct: 267 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 298
>AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
FL+P+ + G +IG+ G+ IS++R A I +
Sbjct: 267 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 298
>AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protein
LIP4 protein.
Length = 276
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 240 FLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
FL+P+ + G +IG+ G+ IS++R A I +
Sbjct: 89 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 120
>AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ16432 fis, clone BRACE3010076, highly similar
to Vigilin. ).
Length = 577
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 267 SIIGKGGTNISKLRSQYKASITVP 338
+IIGKGG NI K+R + I +P
Sbjct: 92 NIIGKGGANIKKIREESNTKIDLP 115
>BC095513-1|AAH95513.1| 471|Homo sapiens CNR1 protein protein.
Length = 471
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 96 LFWYGTKSVLILAITLNYFYVKLKLRS 16
+FW G SVL+L I Y Y+ K S
Sbjct: 276 MFWIGVTSVLLLFIVYAYMYIPWKAHS 302
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,333,139
Number of Sequences: 237096
Number of extensions: 1531616
Number of successful extensions: 6481
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 6250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6481
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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