Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_H21
(510 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 86 2e-17
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 86 2e-17
U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 42 3e-04
U80444-9|AAO12448.1| 71|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U80444-8|AAO12446.1| 67|Caenorhabditis elegans Hypothetical pr... 41 5e-04
AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned exp... 40 8e-04
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 33 0.12
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 31 0.64
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 30 1.1
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 30 1.1
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 30 1.1
U97403-4|AAB52474.2| 445|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 29 2.6
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 29 2.6
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 29 2.6
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical p... 27 6.0
Z81468-4|CAB03877.1| 394|Caenorhabditis elegans Hypothetical pr... 27 6.0
U80843-6|AAB37971.1| 345|Caenorhabditis elegans Skn-1 dependent... 27 6.0
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 27 6.0
AL021181-1|CAA15983.1| 394|Caenorhabditis elegans Hypothetical ... 27 6.0
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 27 7.9
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 85.8 bits (203), Expect = 2e-17
Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 12/125 (9%)
Frame = +3
Query: 168 MKRDAYNDDGPSQKR------------VRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRS 311
MKR+ NDDG R ++Q EV L+ SK AG+IIGKGG NI +LR+
Sbjct: 1 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 60
Query: 312 QYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSDRGPKGDINDQDLDVRVLIH 491
++ A + VPD PERV ++ T D T+L I+K++LP L D + D +VR+L+H
Sbjct: 61 EFNAHVQVPDSNTPERVCTV-TADEKTVLNILKDVLPRLEDNFSERD----PCEVRMLVH 115
Query: 492 QSRAG 506
QS AG
Sbjct: 116 QSHAG 120
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPG-PERVLSI 371
IPS + G+IIG+GG I+++R + A IT+ G PER+++I
Sbjct: 306 IPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQPERIITI 348
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 85.8 bits (203), Expect = 2e-17
Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 12/125 (9%)
Frame = +3
Query: 168 MKRDAYNDDGPSQKR------------VRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRS 311
MKR+ NDDG R ++Q EV L+ SK AG+IIGKGG NI +LR+
Sbjct: 18 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 77
Query: 312 QYKASITVPDCPGPERVLSILTEDVDTLLEIVKEILPCLSDRGPKGDINDQDLDVRVLIH 491
++ A + VPD PERV ++ T D T+L I+K++LP L D + D +VR+L+H
Sbjct: 78 EFNAHVQVPDSNTPERVCTV-TADEKTVLNILKDVLPRLEDNFSERD----PCEVRMLVH 132
Query: 492 QSRAG 506
QS AG
Sbjct: 133 QSHAG 137
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPG-PERVLSI 371
IPS + G+IIG+GG I+++R + A IT+ G PER+++I
Sbjct: 323 IPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQPERIITI 365
>U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical
protein F26B1.2e protein.
Length = 93
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Frame = +3
Query: 168 MKRDAYNDDGPSQKR------------VRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRS 311
MKR+ NDDG R ++Q EV L+ SK AG+IIGKGG NI +LR+
Sbjct: 18 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 77
Query: 312 QYKASITVPDCPGPER 359
++ A + VPD PER
Sbjct: 78 EFNAHVQVPDSNTPER 93
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +3
Query: 231 EVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGP-------ERVLSILTEDVD 389
E+ ++P+ AG +IGK G NI +R Q+ I V G ERV+++ ++
Sbjct: 135 EIKIVMPNTSAGMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHDEAS 194
Query: 390 TLLEIVKEIL-PCLSDRGPKGDINDQD 467
LL+ +L SD +IN +D
Sbjct: 195 ALLQAASRVLEKVASDPHHASEINKED 221
Score = 34.3 bits (75), Expect = 0.052
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Frame = +3
Query: 168 MKRDAYNDDGPSQKRVRQTDDE-------VTFLIPSKVAGSIIGKGGTNISKLRSQYKAS 326
+KR DGP+ K+ +E + LIPS G+IIGKGG + L++
Sbjct: 15 VKRTQDASDGPANKKAHFGGEEEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCR 74
Query: 327 ITV----PDCPGPERVLSILTEDVDTLLEIVKEI 416
+ + PG + ++ ++ ++ +++ I
Sbjct: 75 VQMSKNSETYPGTSERICLVKGRLNNIMAVIESI 108
>U80444-9|AAO12448.1| 71|Caenorhabditis elegans Hypothetical
protein F26B1.2d protein.
Length = 71
Score = 41.1 bits (92), Expect = 5e-04
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 12/61 (19%)
Frame = +3
Query: 168 MKRDAYNDDGPSQKR------------VRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRS 311
MKR+ NDDG R ++Q EV L+ SK AG+IIGKGG NI +LR+
Sbjct: 1 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 60
Query: 312 Q 314
+
Sbjct: 61 E 61
>U80444-8|AAO12446.1| 67|Caenorhabditis elegans Hypothetical
protein F26B1.2b protein.
Length = 67
Score = 41.1 bits (92), Expect = 5e-04
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 12/61 (19%)
Frame = +3
Query: 168 MKRDAYNDDGPSQKR------------VRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRS 311
MKR+ NDDG R ++Q EV L+ SK AG+IIGKGG NI +LR+
Sbjct: 1 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 60
Query: 312 Q 314
+
Sbjct: 61 E 61
>AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned
expression site protein 4 protein.
Length = 430
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +3
Query: 234 VTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
+ L+ K GSIIGK G I K+R + A I + D PER+++I
Sbjct: 74 IRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTI 119
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
++P+ GS+IGKGG+ I +R ASI V
Sbjct: 158 IVPATQCGSLIGKGGSKIKDIREATGASIQV 188
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical protein
C08H9.2 protein.
Length = 1220
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVP-DCPGPERVLSILTEDVDTLLEIVK 410
+P + SIIG+GG + KL Y +I++P D + ++ TE+VD LE ++
Sbjct: 934 LPVDMHRSIIGRGGETVRKLMQDYDVNISIPKDNSSEDITVTGQTENVDQALEALR 989
Score = 31.1 bits (67), Expect = 0.49
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 270 IIGKGGTNISKLRSQYKASITVPD 341
+IG+GG+ ISK++ Q+ IT+P+
Sbjct: 433 VIGRGGSLISKIKDQHGVQITIPN 456
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +3
Query: 216 RQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPDC--PGPERVLSILTEDVD 389
+Q D VT IP++ ++ G I +L+S+Y SI P+ G E + D
Sbjct: 855 KQITDNVT--IPAQFHRGLLAGRGAKIHELQSKYNVSIRFPNNREEGSEGSDQVTVSGRD 912
Query: 390 TLLEIVKEIL 419
T +E KE L
Sbjct: 913 TKVEEAKEAL 922
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 207 KRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITVPD 341
K + + + T I + I+GKGG +I KLR + + I +P+
Sbjct: 558 KEYAENNYQQTVAIFKEFLKHIVGKGGASIRKLRDETETRIDLPE 602
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPDCPGPERVLSI 371
IP G +IGK G + L ++ I +P+ GP ++I
Sbjct: 142 IPKDHHGRLIGKEGALLRNLEAETNCRIQIPNRDGPSSKITI 183
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD 341
+P+++ G IIGKGG N+ +L+ A + +P+
Sbjct: 564 VPTRIIGRIIGKGGQNVRELQRITGAVVKIPE 595
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITVPD 341
+P+++ G IIGKGG N+ +L+ A + +P+
Sbjct: 688 VPTRIIGRIIGKGGQNVRELQRITGAVVKIPE 719
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 30.7 bits (66), Expect = 0.64
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASI------TVPDCPGPERVLSILTEDVDTLLEIV 407
IP+ G+IIGKGG + KLRS ++ + D P ++ + V+ +V
Sbjct: 163 IPANKCGAIIGKGGEQMRKLRSWTNCNVQLLQDNNIADTVKPLKITGD-PKQVEQCRLLV 221
Query: 408 KEILPCLSD 434
+IL C D
Sbjct: 222 ADILACNDD 230
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 186 NDDGPSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
+D P + + + IP+ A +IGKGG+N++ +R A I +
Sbjct: 1780 SDQTPPYEIDTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 1829
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 186 NDDGPSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
+D P + + + IP+ A +IGKGG+N++ +R A I +
Sbjct: 1780 SDQTPPYEIDTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 1829
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 186 NDDGPSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
+D P + + + IP+ A +IGKGG+N++ +R A I +
Sbjct: 601 SDQTPPYEIDTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 650
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 186 NDDGPSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
+D P + + + IP+ A +IGKGG+N++ +R A I +
Sbjct: 601 SDQTPPYEIDTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 650
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 186 NDDGPSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
+D P + + + IP+ A +IGKGG+N++ +R A I +
Sbjct: 1780 SDQTPPYEIDTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 1829
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 186 NDDGPSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLRSQYKASITV 335
+D P + + + IP+ A +IGKGG+N++ +R A I +
Sbjct: 1780 SDQTPPYEIDTRNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 1829
>U97403-4|AAB52474.2| 445|Caenorhabditis elegans Hypothetical
protein T10E9.7a protein.
Length = 445
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 174 RDAYNDDGPSQKRVRQTDDEVTFLIPSKVAGSIIGKGGTNISKLR 308
+ A ND +R + F +PSK G +IGK G I++++
Sbjct: 63 KSALNDVLELVSTIRNKNQRYKFEMPSKDIGFLIGKNGAKINEIK 107
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPGPERVLSILTE----DVDTLLEIVK 410
IP G +IG+GG+ I ++++ + + PD V + E +V+T ++
Sbjct: 13 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN 72
Query: 411 EILPCLSDRGPKGDINDQDLDVRVLIHQSRAG 506
E++ + P+ + + I +R G
Sbjct: 73 EVVARSQNPRPQYGFPRAQTTIDIAIPPNRCG 104
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPGPERVLSILTE----DVDTLLEIVK 410
IP G +IG+GG+ I ++++ + + PD V + E +V+T ++
Sbjct: 76 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN 135
Query: 411 EILPCLSDRGPKGDINDQDLDVRVLIHQSRAG 506
E++ + P+ + + I +R G
Sbjct: 136 EVVARSQNPRPQYGFPRAQTTIDIAIPPNRCG 167
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRSQYKASITV-PDCPGPERVLSILTE----DVDTLLEIVK 410
IP G +IG+GG+ I ++++ + + PD V + E +V+T ++
Sbjct: 54 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN 113
Query: 411 EILPCLSDRGPKGDINDQDLDVRVLIHQSRAG 506
E++ + P+ + + I +R G
Sbjct: 114 EVVARSQNPRPQYGFPRAQTTIDIAIPPNRCG 145
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDC-PGPERVLSILTEDVDTLLEIVKEI 416
++P AG IIGKGG I +L ++ I PD P E ++++ D + + I
Sbjct: 198 IVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERI 257
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Frame = +3
Query: 228 DEVT--FLIPSKVAGSIIGKGGTNI 296
D++T + +P KV G +IGKGG+ I
Sbjct: 5 DKITDIYPVPEKVVGLVIGKGGSEI 29
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 243 LIPSKVAGSIIGKGGTNISKLRSQYKASITV-PDC-PGPERVLSILTEDVDTLLEIVKEI 416
++P AG IIGKGG I +L ++ I PD P E ++++ D + + I
Sbjct: 245 IVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERI 304
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Frame = +3
Query: 228 DEVT--FLIPSKVAGSIIGKGGTNI 296
D++T + +P KV G +IGKGG+ I
Sbjct: 52 DKITDIYPVPEKVVGLVIGKGGSEI 76
>Z81489-10|CAB04004.2| 337|Caenorhabditis elegans Hypothetical
protein C55A1.8 protein.
Length = 337
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -1
Query: 129 GSHLYIGGKMQLFWYGTKSVLILAITLNYFYVKLKL 22
G+ YI + + W S+ +L+ T++ FY+ LKL
Sbjct: 14 GNPNYIQYEYKFNWVSIFSIFVLSYTISSFYIFLKL 49
>Z81468-4|CAB03877.1| 394|Caenorhabditis elegans Hypothetical
protein Y54G11B.1 protein.
Length = 394
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -2
Query: 233 FVVSLAHPLLRGTVIIVSIT---LHYSIIGRHRLKIKAVHTFILVEKCSFFGTV 81
++ S HP L + ++ + +H +++ R R++ +VHT ++ S GT+
Sbjct: 28 YLYSNVHPFLSFILCVLGLAANAIHITVLTRPRMRHSSVHTVLVCIAISDMGTM 81
>U80843-6|AAB37971.1| 345|Caenorhabditis elegans Skn-1 dependent
zygotic transcriptprotein 4 protein.
Length = 345
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 15 HFAILILRKNSLKLSQELVHF*YRTKKAAFFHQYKGVNRLDLKPVSTD 158
H L L +S+ ++++ F K F H + LDL P+ D
Sbjct: 44 HIKYLKLTDHSITINKDTYQFTVHNTKNGFLHDIDERDELDLSPIHED 91
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -2
Query: 356 FGA--RAIWDCYRGFVLTP*FRYISATLPDN*SSNLTR 249
FGA R DC GFVL P F + +TL D+ + + R
Sbjct: 200 FGAVERLKIDCADGFVLFPPFEVVKSTLEDHRHNKIYR 237
>AL021181-1|CAA15983.1| 394|Caenorhabditis elegans Hypothetical
protein Y54G11B.1 protein.
Length = 394
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -2
Query: 233 FVVSLAHPLLRGTVIIVSIT---LHYSIIGRHRLKIKAVHTFILVEKCSFFGTV 81
++ S HP L + ++ + +H +++ R R++ +VHT ++ S GT+
Sbjct: 28 YLYSNVHPFLSFILCVLGLAANAIHITVLTRPRMRHSSVHTVLVCIAISDMGTM 81
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 246 IPSKVAGSIIGKGGTNISKLRS 311
IP+ G+IIGK G + KLRS
Sbjct: 249 IPANKCGAIIGKKGEQMRKLRS 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,388,023
Number of Sequences: 27780
Number of extensions: 234072
Number of successful extensions: 573
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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