Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_H21
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.4  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    22   4.2  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   5.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   5.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   5.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   5.6  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   7.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.4  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 360  VLSILTEDVDTLLEIVKEILPCLSDRG 440
            VLS+L ++VD  +E+  + L  L  +G
Sbjct: 1329 VLSMLLDEVDISMEVPSDALIALYSQG 1355


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 90  WYGTKSVLILAITLNYFYVKLKLRSEKP 7
           W     ++ILA  + YF+  + +RSE P
Sbjct: 72  WMNVYYIVILAWAIFYFF--MSMRSELP 97


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -2

Query: 251 RYEESDFVVSLAHPLLRGTVIIVSITLHYSIIGR 150
           R  ++ F+VSLA   L   ++++   + Y ++G+
Sbjct: 68  RIVQNFFIVSLAVADLAVAILVMPFNVAYLLLGK 101


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -2

Query: 251 RYEESDFVVSLAHPLLRGTVIIVSITLHYSIIGR 150
           R  ++ F+VSLA   L   ++++   + Y ++G+
Sbjct: 68  RIVQNFFIVSLAVADLAVAILVMPFNVAYLLLGK 101


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -2

Query: 251 RYEESDFVVSLAHPLLRGTVIIVSITLHYSIIGR 150
           R  ++ F+VSLA   L   ++++   + Y ++G+
Sbjct: 68  RIVQNFFIVSLAVADLAVAILVMPFNVAYLLLGK 101


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3

Query: 112 WWKNAAFLVRY 80
           WWKNA F   Y
Sbjct: 24  WWKNAIFYQVY 34


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 368 DIDRGRGHAFGNCERNSTV 424
           D+DR R   F   ERN+ V
Sbjct: 74  DVDRWRDKTFVTIERNNGV 92


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 164 SIIGRHRLKIKAVHTFILVEKCSFFG 87
           SI    ++K+ A+  FIL+ + + FG
Sbjct: 540 SISNNEQVKVSALGFFILISQDAKFG 565


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 164 SIIGRHRLKIKAVHTFILVEKCSFFG 87
           SI    ++K+ A+  FIL+ + + FG
Sbjct: 540 SISNNEQVKVSALGFFILISQDAKFG 565


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,252
Number of Sequences: 438
Number of extensions: 2689
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)