Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_H12
         (436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X77926-1|CAA54898.1|  218|Drosophila melanogaster BBC1 protein p...   138   4e-33
AE014134-1746|ABC65888.1|  218|Drosophila melanogaster CG4651-PB...   138   4e-33
AE014134-1745|AAF52842.1|  218|Drosophila melanogaster CG4651-PA...   138   4e-33
AY094736-1|AAM11089.1|  346|Drosophila melanogaster GH28507p pro...    27   8.3  
AE013599-1425|AAF58549.2|  403|Drosophila melanogaster CG8854-PA...    27   8.3  

>X77926-1|CAA54898.1|  218|Drosophila melanogaster BBC1 protein
           protein.
          Length = 218

 Score =  138 bits (333), Expect = 4e-33
 Identities = 60/95 (63%), Positives = 71/95 (74%)
 Frame = +3

Query: 12  MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRC 191
           MGKGNNMIPN H+HK WQR VKTWFNQPAR+ RR  NR+              LRPVVRC
Sbjct: 1   MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRC 60

Query: 192 PTVRYHTKVRAGRGFTLREIRASGLNPSFARTIGI 296
           PT+RYHTK+RAGRGFTL E++ +G+  +FA+TIGI
Sbjct: 61  PTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGI 95



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +1

Query: 361 NVQRLKEYRARLILFP 408
           N+QRLKEYR++LILFP
Sbjct: 112 NIQRLKEYRSKLILFP 127


>AE014134-1746|ABC65888.1|  218|Drosophila melanogaster CG4651-PB,
           isoform B protein.
          Length = 218

 Score =  138 bits (333), Expect = 4e-33
 Identities = 60/95 (63%), Positives = 71/95 (74%)
 Frame = +3

Query: 12  MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRC 191
           MGKGNNMIPN H+HK WQR VKTWFNQPAR+ RR  NR+              LRPVVRC
Sbjct: 1   MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRC 60

Query: 192 PTVRYHTKVRAGRGFTLREIRASGLNPSFARTIGI 296
           PT+RYHTK+RAGRGFTL E++ +G+  +FA+TIGI
Sbjct: 61  PTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGI 95



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +1

Query: 361 NVQRLKEYRARLILFP 408
           N+QRLKEYR++LILFP
Sbjct: 112 NIQRLKEYRSKLILFP 127


>AE014134-1745|AAF52842.1|  218|Drosophila melanogaster CG4651-PA,
           isoform A protein.
          Length = 218

 Score =  138 bits (333), Expect = 4e-33
 Identities = 60/95 (63%), Positives = 71/95 (74%)
 Frame = +3

Query: 12  MGKGNNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVRC 191
           MGKGNNMIPN H+HK WQR VKTWFNQPAR+ RR  NR+              LRPVVRC
Sbjct: 1   MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRC 60

Query: 192 PTVRYHTKVRAGRGFTLREIRASGLNPSFARTIGI 296
           PT+RYHTK+RAGRGFTL E++ +G+  +FA+TIGI
Sbjct: 61  PTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGI 95



 Score = 33.5 bits (73), Expect = 0.13
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +1

Query: 361 NVQRLKEYRARLILFP 408
           N+QRLKEYR++LILFP
Sbjct: 112 NIQRLKEYRSKLILFP 127


>AY094736-1|AAM11089.1|  346|Drosophila melanogaster GH28507p
           protein.
          Length = 346

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 185 SLPYCALSYKSSCRQRIY 238
           SLPYC++   S C+Q+IY
Sbjct: 257 SLPYCSIPDCSECQQQIY 274


>AE013599-1425|AAF58549.2|  403|Drosophila melanogaster CG8854-PA
           protein.
          Length = 403

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 185 SLPYCALSYKSSCRQRIY 238
           SLPYC++   S C+Q+IY
Sbjct: 314 SLPYCSIPDCSECQQQIY 331


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,334,909
Number of Sequences: 53049
Number of extensions: 286048
Number of successful extensions: 707
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)